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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917604
Clone id YMU001_000103_A02
Library
Length 597
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCTTGCGCATCCATCCCACCATGCCTCCCGACCTCCGTCGATCGCCATTTGGTCGCACA
TATTGCGGGGAATGGTCAGTTCAGGACCATTCCCTACCCCATCATTTGCATTTTGCAAGT
TCTTCAGCCCATCTACATCTTGCGCATCCATCCCCCATTCCATTGCGTTTTTGCATCCCA
TTCCCCTCTTTTCTTCATCCATCTCTCTCCATTGCGTTTTCGCTTCATTGTCCCATACAT
CCTTTGCTTTGCTCATCCATTGCTAGGAACATTCCCCATCTCTCCTACGCATTCATTGCA
AGCATAGGCATCTAGGGTATGCAGATCTGCCCCATCTTCTCGCCATTCTCGGAGCCTCAT
AACTGTTGTCCATTCCAGCCATATTCTCAGCCCATCTCGTGGCACATCTCGCATCGCATT
GGCTGCGATTTTGGCTCATCATCCTCTCCATACCTTGGCTGTGTTTTCTACAGCAAATCT
CAGCCTGTTTTCAGCCATCTTAAACCTCACAGCGGCGCATCCAATCAGTCCCAAAACATC
TATCTTTTTGGAGGCCATTCATCGCCTACATTGAGAGCATCCATCCACGACATCATC
■■Homology search results ■■ -
sp_hit_id P09799
Definition sp|P09799|VCLA_GOSHI Vicilin GC72-A OS=Gossypium hirsutum
Align length 101
Score (bit) 33.1
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917604|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_A02.
         (597 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P09799|VCLA_GOSHI Vicilin GC72-A OS=Gossypium hirsutum PE=3 SV=1    33   1.1  
sp|Q2WGC5|PSAB_SELUN Photosystem I P700 chlorophyll a apoprotein...    31   4.1  
sp|Q966W3|NDST_CAEEL Bifunctional heparan sulfate N-deacetylase/...    31   5.4  
sp|P29673|APTE_DROME Protein apterous OS=Drosophila melanogaster...    30   7.1  
sp|Q6DIL6|F124A_XENTR Protein FAM124A OS=Xenopus tropicalis GN=f...    30   7.1  
sp|Q9QY80|PTPLA_MOUSE Protein-tyrosine phosphatase-like member A...    30   9.2  
sp|Q875M9|KPYK_KLULA Pyruvate kinase OS=Kluyveromyces lactis GN=...    30   9.2  

>sp|P09799|VCLA_GOSHI Vicilin GC72-A OS=Gossypium hirsutum PE=3 SV=1
          Length = 605

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
 Frame = -3

Query: 472 CRKHSQGMERMMSQNRSQCDARCATRWAENMAGM-DNSYEAPRMARRWGRSAYPRCL-CL 299
           CR+H Q  ER +   R  C+  C  ++ +      D  ++  +   +W      R   C+
Sbjct: 87  CRQHCQQEERRL---RPHCEQSCREQYEKQQQQQPDKQFKECQQRCQWQEQRPERKQQCV 143

Query: 298 Q*MRRRDGECS*QWMSKAKDVWDNEAKTQWREMDEEKRGMG 176
           +       EC  Q+    +D W  E + +WRE +EE+   G
Sbjct: 144 K-------ECREQYQ---EDPWKGERENKWREEEEEESDEG 174


>sp|Q2WGC5|PSAB_SELUN Photosystem I P700 chlorophyll a apoprotein A2
           OS=Selaginella uncinata GN=psaB PE=3 SV=1
          Length = 734

 Score = 31.2 bits (69), Expect = 4.1
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 187 RGMGCKNAMEWGMDAQDVDGLKNLQNANDGVG 92
           +G+G  +A +WG+ A+DVD   +L N + G G
Sbjct: 220 QGLGPLSAGQWGVYARDVDSSSHLFNTSQGAG 251


>sp|Q966W3|NDST_CAEEL Bifunctional heparan sulfate
           N-deacetylase/N-sulfotransferase 1 OS=Caenorhabditis
           elegans GN=hst-1 PE=2 SV=1
          Length = 852

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 12  PSHHASRPPSIAIWSHILRGMVSSGPFPTPSFAFCKFFS--PSTS 140
           P HHA  PPSI      L  ++  GP  T S A   F S  P+TS
Sbjct: 565 PRHHAILPPSINCTKKSLPDLLIIGPQKTGSTALASFLSLHPNTS 609


>sp|P29673|APTE_DROME Protein apterous OS=Drosophila melanogaster
           GN=ap PE=1 SV=1
          Length = 469

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 238 VWDNEAKTQWREMDEEKRGMGCKNAMEWGMDAQDVDGLKNLQNANDGVGNGPELTIPRNM 59
           VW   A+ +WR M  ++ G G    +E G  A D+D + ++ +    +  GP  T P N+
Sbjct: 413 VWFQNARAKWRRMMMKQDGSG---LLEKGEGALDLDSI-SVHSPTSFILGGPNSTPPLNL 468


>sp|Q6DIL6|F124A_XENTR Protein FAM124A OS=Xenopus tropicalis
           GN=fam124a PE=2 SV=1
          Length = 503

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
 Frame = +1

Query: 343 PFSEPHNCCPFQPYSQPISWHISHRIGCD-------------FGSSSSPYLGCVFYSKSQ 483
           P SEPH C     Y  P +W IS +I  D                SSS       YS   
Sbjct: 360 PMSEPHPCFGLDTYETP-AWRISPKINIDDLEGVEETDVDTGMKLSSSDLSVVSAYSPLN 418

Query: 484 PVFSHLK---PHSGASNQSQNIYLFGGHSSPTLRASIHDI 594
              S L+   P  GA  QS  +     HSS +L  S+ DI
Sbjct: 419 GPCSDLEASLPSEGALAQSDTVPGRQNHSSDSLH-SVSDI 457


>sp|Q9QY80|PTPLA_MOUSE Protein-tyrosine phosphatase-like member A
           OS=Mus musculus GN=Ptpla PE=2 SV=1
          Length = 281

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +3

Query: 408 LASHWLRFWLIILSIPWLCFLQQISACFQPS*TSQRRIQSVPKHLSFWRPFIAYIESIH 584
           LA+ WL F+ I ++  WL     +   +    T +   +S+ K L F++ F A +E +H
Sbjct: 64  LATAWLTFYNIAMTAGWLVLAIAMVRFYMEKGTHRGLYKSIQKTLKFFQTF-ALLEVVH 121


>sp|Q875M9|KPYK_KLULA Pyruvate kinase OS=Kluyveromyces lactis
           GN=PYK1 PE=3 SV=1
          Length = 501

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -3

Query: 238 VWDNEAKTQWREMDEEKRGMGCKNAMEWGMDAQDVDGLKNLQNANDGVGNGPELTI 71
           V+D  + ++W    E++   G K A E+G+   D D +  +Q    GVGN   L +
Sbjct: 444 VYDESSDSEWTVDVEKRINFGVKKAKEFGI-LVDGDTIVTIQGFAAGVGNSNTLRV 498
tr_hit_id A7T7S9
Definition tr|A7T7S9|A7T7S9_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis
Align length 89
Score (bit) 36.2
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917604|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_A02.
         (597 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7T7S9|A7T7S9_NEMVE Predicted protein (Fragment) OS=Nematoste...    36   1.5  
tr|B6KVM4|B6KVM4_TOXGO SWIM zinc finger domain-containing protei...    36   1.9  
tr|B8NAZ6|B8NAZ6_ASPFL C6 finger domain protein, putative OS=Asp...    35   3.3  
tr|B2WK42|B2WK42_PYRTR Predicted protein OS=Pyrenophora tritici-...    35   4.3  
tr|A7SLJ5|A7SLJ5_NEMVE Predicted protein OS=Nematostella vectens...    35   4.3  
tr|Q6YZ30|Q6YZ30_ORYSJ Putative uncharacterized protein P0436B05...    27   5.2  
tr|A7RGJ9|A7RGJ9_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   5.6  
tr|Q297C0|Q297C0_DROPS GA19083 OS=Drosophila pseudoobscura pseud...    28   7.2  
tr|B4GEB8|B4GEB8_DROPE GL21991 OS=Drosophila persimilis GN=GL219...    28   7.2  
tr|B3N1N2|B3N1N2_DROAN GF20725 OS=Drosophila ananassae GN=GF2072...    27   7.2  
tr|B2VRX4|B2VRX4_PYRTR Putative uncharacterized protein OS=Pyren...    34   7.3  
tr|Q5B4I4|Q5B4I4_EMENI Putative uncharacterized protein OS=Emeri...    33   9.5  

>tr|A7T7S9|A7T7S9_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g6013 PE=4 SV=1
          Length = 136

 Score = 36.2 bits (82), Expect = 1.5
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 11  SIPPCLPTSVDRHLVA--HIAGNGQFRTIPYPII--CILQVLQPIYILRIHPPFHCVFAS 178
           SI PCL +     LV   H      FR +    I  C+  + +P+ ++ IHP   C+++ 
Sbjct: 4   SIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHP---CLYSM 60

Query: 179 HSPLFFIHLSPLRFRFIVPYILCFAHPLL 265
             PL  + + P  +    P ++   HP L
Sbjct: 61  FRPLLVVSIHPCLYSMFRPLLVVSIHPCL 89



 Score = 36.2 bits (82), Expect = 1.5
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 11  SIPPCLPTSVDRHLVA--HIAGNGQFRTIPYPII--CILQVLQPIYILRIHPPFHCVFAS 178
           SI PCL +     LV   H      FR +    I  C+  + +P+ ++ IHP   C+++ 
Sbjct: 20  SIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHP---CLYSM 76

Query: 179 HSPLFFIHLSPLRFRFIVPYILCFAHPLL 265
             PL  + + P  +    P ++   HP L
Sbjct: 77  FRPLLVVSIHPCLYSMFRPLLVVSIHPCL 105



 Score = 36.2 bits (82), Expect = 1.5
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +2

Query: 11  SIPPCLPTSVDRHLVA--HIAGNGQFRTIPYPII--CILQVLQPIYILRIHPPFHCVFAS 178
           SI PCL +     LV   H      FR +    I  C+  + +P+ ++ IHP   C+++ 
Sbjct: 36  SIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHP---CLYSM 92

Query: 179 HSPLFFIHLSPLRFRFIVPYILCFAHPLL 265
             PL  + + P  +    P ++   HP L
Sbjct: 93  FRPLLVVSIHPCLYSMFRPLLVVSIHPCL 121



 Score = 35.0 bits (79), Expect = 3.3
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
 Frame = +2

Query: 11  SIPPCLPTSVDRHLVA--HIAGNGQFRTIPYPII--CILQVLQPIYILRIHPPFHCVFAS 178
           SI PCL +     LV   H      FR +    I  C+  + +P+ ++ IHP   C+++ 
Sbjct: 52  SIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHPCLYSMFRPLLVVSIHP---CLYSM 108

Query: 179 HSPLFFIHLSPLRFRFIVPYILCFAHP 259
             PL  + + P  +    P ++   HP
Sbjct: 109 FRPLLVVSIHPCLYSMFRPLLVVSIHP 135


>tr|B6KVM4|B6KVM4_TOXGO SWIM zinc finger domain-containing protein
            OS=Toxoplasma gondii ME49 GN=TGME49_104720 PE=4 SV=1
          Length = 6036

 Score = 35.8 bits (81), Expect = 1.9
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = +3

Query: 12   PSHHASRPPSIAIWSHILRGMVSSGPF---PTPSFAFCKFFSPSTSCASIPHSIAFLHPI 182
            PS HA+ P         L G+ +   F   PTP    C    PS+SCAS P S +   P+
Sbjct: 2484 PSGHAAAP---------LYGLQTPSSFEFCPTPEGLSCVSSPPSSSCASSPSSASVSAPL 2534

Query: 183  PLFSSSISLHC 215
            P    S  + C
Sbjct: 2535 PALPESRPVFC 2545


>tr|B8NAZ6|B8NAZ6_ASPFL C6 finger domain protein, putative
           OS=Aspergillus flavus NRRL3357 GN=AFLA_043710 PE=4 SV=1
          Length = 647

 Score = 35.0 bits (79), Expect = 3.3
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = +3

Query: 3   LAHPSHHASRPPSIAIWSHILRGMVSSG-------PFPTPSFAFCKFFSPSTSCASIPHS 161
           L HPS H + P +++ +S +  G            P   PS +     +P  S AS+P S
Sbjct: 16  LLHPSQHLNEPSALSAYSILGPGQYPESVALWHNPPTQPPSQSGLSVTAPPASFASVPKS 75

Query: 162 IAFLHPIP 185
            + L PIP
Sbjct: 76  QSLLQPIP 83


>tr|B2WK42|B2WK42_PYRTR Predicted protein OS=Pyrenophora
           tritici-repentis (strain Pt-1C-BFP) GN=PTRG_10231 PE=4
           SV=1
          Length = 177

 Score = 34.7 bits (78), Expect = 4.3
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 84  GPFPTPSFAFCKFFSPSTSCASIPHSIAFLHPIPLFSSSISLHCVFASLSHTSFALLIH- 260
           GP PTP      + SP+       HS AF  PIP F ++ +L    A  S++    L H 
Sbjct: 65  GPHPTPDTPGAFYDSPAI------HSFAFQAPIPKFPTAYALAFSLAEASYSDRGYLGHY 118

Query: 261 -C*EHSPSLLRIHC 299
               +SP +   HC
Sbjct: 119 ELEAYSPDVCAAHC 132


>tr|A7SLJ5|A7SLJ5_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g246042 PE=4 SV=1
          Length = 748

 Score = 34.7 bits (78), Expect = 4.3
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 349 SEPHNCCPFQPYSQPISWHISHRIGCDFGSS-SSPYLGCVFYSKSQPVFSHLKPHSGASN 525
           S PH    FQP   P+S    H+   D+ S+ SS  L  +F +  QP+ S  + HSGAS 
Sbjct: 526 STPHQ---FQPPEGPVSNSGKHKDKKDYFSNFSSQELEAMFLTPEQPLASTSQSHSGASG 582

Query: 526 QSQ 534
            S+
Sbjct: 583 NSK 585


>tr|Q6YZ30|Q6YZ30_ORYSJ Putative uncharacterized protein P0436B05.18
           OS=Oryza sativa subsp. japonica GN=P0436B05.18 PE=4 SV=1
          Length = 152

 Score = 27.3 bits (59), Expect(2) = 5.2
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 155 GDGCARCRWAEELAKCK*WGREWS*TDHSPQYVRPNGDR 39
           G GC+  R  +E+  C  W   WS TD     +RP+  R
Sbjct: 85  GTGCSSARIQDEVEICSWWMPSWSATD---TQLRPDRQR 120



 Score = 25.4 bits (54), Expect(2) = 5.2
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 7/34 (20%)
 Frame = -3

Query: 244 KDVWDNE-------AKTQWREMDEEKRGMGCKNA 164
           K++W +E       A+ +WR +  ++ G GC +A
Sbjct: 58  KNLWQHESPLMVPLAEIRWRALGNQRGGTGCSSA 91


>tr|A7RGJ9|A7RGJ9_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g80567 PE=4 SV=1
          Length = 271

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
 Frame = +3

Query: 15  SHHASRPPSIAIWSHILRGMVSSGPFPTPSFAFCKFFSPST----SCASIPHSI----AF 170
           SH    PPS    +H L     + PF T S +      PST    SC + P S       
Sbjct: 115 SHPCHAPPSS---THTLSRSCHAPPFSTHSHSC--HAPPSTTHSHSCHAPPSSTHSSRVM 169

Query: 171 LHPIPLFSSSISLHCVFASLSHTSFALLIHC*EHSPSLLRIH 296
           LHP+    S + LH       HT   +++H  +H+PS + +H
Sbjct: 170 LHPLQHTLSRVMLH----PFQHTLSRVMLHPLQHTPSRVMLH 207


>tr|Q297C0|Q297C0_DROPS GA19083 OS=Drosophila pseudoobscura
            pseudoobscura GN=GA19083 PE=4 SV=1
          Length = 1046

 Score = 27.7 bits (60), Expect(2) = 7.2
 Identities = 19/81 (23%), Positives = 30/81 (37%)
 Frame = +3

Query: 93   PTPSFAFCKFFSPSTSCASIPHSIAFLHPIPLFSSSISLHCVFASLSHTSFALLIHC*EH 272
            P+ +  FC+++ P+  C S P+                  C FA     S    ++    
Sbjct: 905  PSCTKQFCEYYHPTAPCKSFPN------------------CKFADKCMYSHPKCMY---- 942

Query: 273  SPSLLRIHCKHRHLGYADLPH 335
              S + I C + H G  DL H
Sbjct: 943  DMSCMSIDCNYAHSGQRDLSH 963



 Score = 24.3 bits (51), Expect(2) = 7.2
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +1

Query: 367  CPFQPYSQPISWHISHRIGCDFGSSSSPYLGCVFY 471
            C + P    +     H   C FG +    L CVFY
Sbjct: 997  CKYYPNCTKVGCTFYHPKPCRFGKNCVNKLECVFY 1031


>tr|B4GEB8|B4GEB8_DROPE GL21991 OS=Drosophila persimilis GN=GL21991
            PE=4 SV=1
          Length = 1046

 Score = 27.7 bits (60), Expect(2) = 7.2
 Identities = 19/81 (23%), Positives = 30/81 (37%)
 Frame = +3

Query: 93   PTPSFAFCKFFSPSTSCASIPHSIAFLHPIPLFSSSISLHCVFASLSHTSFALLIHC*EH 272
            P+ +  FC+++ P+  C S P+                  C FA     S    ++    
Sbjct: 905  PSCTKQFCEYYHPTAPCKSFPN------------------CKFADKCMYSHPKCMY---- 942

Query: 273  SPSLLRIHCKHRHLGYADLPH 335
              S + I C + H G  DL H
Sbjct: 943  DMSCMSIDCNYAHSGQRDLSH 963



 Score = 24.3 bits (51), Expect(2) = 7.2
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +1

Query: 367  CPFQPYSQPISWHISHRIGCDFGSSSSPYLGCVFY 471
            C + P    +     H   C FG +    L CVFY
Sbjct: 997  CKYYPNCTKVGCTFYHPKPCRFGKNCVNKLECVFY 1031


>tr|B3N1N2|B3N1N2_DROAN GF20725 OS=Drosophila ananassae GN=GF20725
            PE=4 SV=1
          Length = 990

 Score = 27.3 bits (59), Expect(2) = 7.2
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +3

Query: 93   PTPSFAFCKFFSPSTSCASIPHSIAFLHPIPLFSSSISLHCVFAS---LSHTSFALLIHC 263
            P+ +  FC+++ P+  C S P                  +C FA     SH      + C
Sbjct: 849  PSCTKQFCEYYHPTAPCKSFP------------------NCKFADKCMYSHPKCKFDMSC 890

Query: 264  *EHSPSLLRIHCKHRHLGYADLPH 335
                   + I C + H G  DL H
Sbjct: 891  -------MSIDCNYAHSGQRDLSH 907



 Score = 24.6 bits (52), Expect(2) = 7.2
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +1

Query: 367  CPFQPYSQPISWHISHRIGCDFGSSSSPYLGCVFY 471
            C + P    I     H   C FG +    L C+FY
Sbjct: 941  CKYYPNCSKIGCTFYHPKPCRFGKNCVNKLECIFY 975