BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917606|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_A04.
         (387 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3SH75|GLGC_THIDA Glucose-1-phosphate adenylyltransferase OS=...    32   1.3  
sp|O36633|GLYC_HRSVB Major surface glycoprotein G OS=Human respi...    31   1.7  
sp|A1RRV7|TRUD_PYRIL Probable tRNA pseudouridine synthase D OS=P...    29   6.5  

>sp|Q3SH75|GLGC_THIDA Glucose-1-phosphate adenylyltransferase
           OS=Thiobacillus denitrificans (strain ATCC 25259)
           GN=glgC PE=3 SV=1
          Length = 439

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 349 QAKLWHFVFREREGEPRYWRFPSAQ*C 269
           +A++  F FR+REG+P YWR   A  C
Sbjct: 259 RARIMAFPFRDREGKPGYWRDVGALNC 285


>sp|O36633|GLYC_HRSVB Major surface glycoprotein G OS=Human
           respiratory syncytial virus B (strain B1) GN=G PE=3 SV=1
          Length = 299

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
 Frame = +1

Query: 85  TANQMIHVSTC**RRPETSTAHKAKNLLSVAGLGLSLCIC-----IKCTH*TTLTEVLLQ 249
           T N +I +S+C  R    S A  A ++L++  +  SL I      I   H  TLT V +Q
Sbjct: 19  TLNHLIVISSCLYRLNLKSIAQIALSVLAMI-ISTSLIIAAIIFIISANHKVTLTTVTVQ 77

Query: 250 TISERMYTTEPKETASIEALPP---SL*IQNAITSPEH 354
           TI      TE   T  +  +PP   S   Q   TSP H
Sbjct: 78  TIKNH---TEKNITTYLTQVPPERVSSSKQPTTTSPIH 112


>sp|A1RRV7|TRUD_PYRIL Probable tRNA pseudouridine synthase D
           OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
           GN=truD PE=3 SV=1
          Length = 412

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 108 EHLLVTSTRDIYSSQSQKPTVGSWTWVVVV 197
           E +L   T    +  S KP VGSWTW+ VV
Sbjct: 37  EEVLKDGTVVALTGISLKPRVGSWTWIHVV 66

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917606|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_A04.
         (387 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******