BP917611
Clone id YMU001_000103_B03
Library
Length 389
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGGCATAAACAGTTCTATCAAAGGTACCTAACACTACCAATCCCACCAAAACAAGCATA
AACAGTTCTACCAAAGGTACCTAACACTATCAATCCCACCAAACCAAGCATAAACAGTTA
TACCAAAAACTCCCAAAACTACCAGCACCAGTTGCTCTAGAATCTCCTGTCGAGCAATGA
CATATCTTCACTGATTCCGTATCGACATAGCATCCTTTGACTAGCAGCCAAATCAGCTTC
AATCACATTAATTTCTGCGTCATCGCTAGTGTTGGCCTCTCTCAGTGTTTCCAGCTGGGT
CTCATATTCCTTGATGATGTCCATAATCTGTCCTCAAGAGTGTATCCTTCTTCTGCTTCA
GAGACATTGTCAGCTCTTTCAGCCTATCG
■■Homology search results ■■ -
sp_hit_id Q6P5D4
Definition sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus musculus
Align length 56
Score (bit) 37.7
E-value 0.018
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917611|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_B03.
(389 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus musc... 38 0.018
sp|Q05809|YL218_YEAST Coiled-coil-helix-coiled-coil-helix domain... 30 3.8
sp|P53897|YNP7_YEAST Uncharacterized protein YNL157W OS=Saccharo... 30 4.9
sp|Q01722|GCR2_YEAST Glycolytic genes transcriptional activator ... 29 6.4

>sp|Q6P5D4|CP135_MOUSE Centrosomal protein of 135 kDa OS=Mus
musculus GN=Cep135 PE=2 SV=1
Length = 1140

Score = 37.7 bits (86), Expect = 0.018
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = -3

Query: 330 QIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDRR 163
Q+ + EYET L L+E T+ D EIN + L AS + L G S ++S + R
Sbjct: 766 QLKVTVAEYETSLNQLQETLTTRDREINSLRRQLDASHKELDDVGKSREISFKENR 821


>sp|Q05809|YL218_YEAST Coiled-coil-helix-coiled-coil-helix
domain-containing protein YLR218C OS=Saccharomyces
cerevisiae GN=YLR218C PE=1 SV=1
Length = 150

Score = 30.0 bits (66), Expect = 3.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1

Query: 215 GCYVDTESVKICHCSTGDSR 156
GCYV+ ++++CH TGD R
Sbjct: 92 GCYVENLALQLCHAETGDWR 111


>sp|P53897|YNP7_YEAST Uncharacterized protein YNL157W
OS=Saccharomyces cerevisiae GN=YNL157W PE=1 SV=1
Length = 168

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1

Query: 28 PNTTNPTKTSINSSTKGT*HYQSHQTKHKQLYQKLPKLPA 147
PN++NP T +N+ GT +LY+ KLP+
Sbjct: 8 PNSSNPDLTKLNNGESGTIDTSKFSPNEMKLYKMYGKLPS 47


>sp|Q01722|GCR2_YEAST Glycolytic genes transcriptional activator
GCR2 OS=Saccharomyces cerevisiae GN=GCR2 PE=1 SV=1
Length = 534

Score = 29.3 bits (64), Expect = 6.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1

Query: 19 SKVPNTTNPTKTSINSSTKGT*HYQSHQTKHKQLYQKLPKL 141
S + N +NP T N+S+ T + Q ++ QL+ K+ KL
Sbjct: 102 SAISNASNPATTGNNASSSATSNGIYTQAQYSQLFAKISKL 142


tr_hit_id Q3UVI6
Definition tr|Q3UVI6|Q3UVI6_MOUSE Putative uncharacterized protein OS=Mus musculus
Align length 56
Score (bit) 37.7
E-value 0.29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917611|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_B03.
(389 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3UVI6|Q3UVI6_MOUSE Putative uncharacterized protein OS=Mus m... 38 0.29
tr|Q50HR4|Q50HR4_CRIGR Centrosomal protein 135 OS=Cricetulus gri... 35 1.9
tr|A3Q5K0|A3Q5K0_MYCSJ Shikimate dehydrogenase OS=Mycobacterium ... 34 3.2
tr|Q75A31|Q75A31_ASHGO ADR089Cp OS=Ashbya gossypii GN=ADR089C PE... 33 7.1

>tr|Q3UVI6|Q3UVI6_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Cep135 PE=2 SV=1
Length = 1031

Score = 37.7 bits (86), Expect = 0.29
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = -3

Query: 330 QIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDRR 163
Q+ + EYET L L+E T+ D EIN + L AS + L G S ++S + R
Sbjct: 766 QLKVTVAEYETSLNQLQETLTTRDREINSLRRQLDASHKELDDVGKSREISFKENR 821


>tr|Q50HR4|Q50HR4_CRIGR Centrosomal protein 135 OS=Cricetulus
griseus GN=cep135 PE=2 SV=1
Length = 1145

Score = 35.0 bits (79), Expect = 1.9
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -3

Query: 330 QIMDIIKEYETQLETLREANTSDDAEINVIEADLAASQRMLCRYGISEDMSLLDRR 163
Q+ + EYET L L++ + D E+N + L A+ + L G S D+S + R
Sbjct: 766 QMRATVTEYETSLNQLKDTLANRDREVNSLRRQLDATHKELDDVGKSRDISFKENR 821


>tr|A3Q5K0|A3Q5K0_MYCSJ Shikimate dehydrogenase OS=Mycobacterium sp.
(strain JLS) GN=Mjls_4662 PE=4 SV=1
Length = 274

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3

Query: 327 IMDIIKEYETQLETLREANT--SDDAEINVIEADLAASQRMLCRYGISEDMSLL 172
++D++ E E + NT +DD + D A QR++ +YG+ D S++
Sbjct: 74 VLDLVDEVEPSARIINAVNTIVNDDGHLTASNTDYLAVQRLIDQYGLEADRSVM 127


>tr|Q75A31|Q75A31_ASHGO ADR089Cp OS=Ashbya gossypii GN=ADR089C PE=4
SV=1
Length = 81

Score = 33.1 bits (74), Expect = 7.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1

Query: 215 GCYVDTESVKICHCSTGDSRATGA 144
GCYV+ ++++CH TGD RA A
Sbjct: 35 GCYVENMALQLCHAETGDWRACAA 58