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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917617
Clone id YMU001_000103_C03
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGGAAGAATTCGCGGACACTGTGAAATTTGCACCGAGCAAGTAATGTTTCCATTGACTC
AAAGCATGTATCACTGCTAAGAGCTCTTTCTCATAAAAGTATGCAACTCTCTTAGTCTTC
AAAAGTATCCAGTCCTCATAGCTACTACACGGGCATCTTGCATCAAGACCACTCGAAATT
TACCCCCACAAGCATCCCAATAAACGTCAAAAGGCTTCTACAAATCTGGTAGAATCAATA
CGGACCCCATGGTCAACTTTTGCTTGAGCAGTTTAAATGACGGATCTCTCTAGGTTTAGG
TCCCAAGTGAATGGTCTTTCTAAGGGAGTGTAATAACGAACATATCCGCAAAATTCGAGA
TAAAATGCCAATAGTAAGAACATAAGTCCAAGAAGCTCCTCACGTCAAGCACATTCTCCA
ATGTAGGACAATCGTGGGCGTGCAACGGTGTCCACAAAATTCCAGATTAACAGCCGATAG
TAAGAACATAATCCCAAGAAGCTCCTAAAGAATTCTCTTCTGTCTGT
■■Homology search results ■■ -
sp_hit_id P04323
Definition sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster
Align length 87
Score (bit) 38.5
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917617|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C03.
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...    39   1e-06
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra...    38   7e-04
sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0...    38   0.031
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ...    33   1.0  
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra...    32   1.3  
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v...    32   1.7  
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi...    32   1.7  
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi...    32   1.7  
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus...    32   1.7  
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...    32   1.7  
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr...    32   2.2  
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia...    31   2.9  
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (...    31   2.9  
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen...    31   3.8  
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi...    30   5.0  
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...    30   8.5  
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...    30   8.5  
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...    30   8.5  

>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score = 38.5 bits (88), Expect(2) = 1e-06
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = -2

Query: 390 DVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*R-DPSFKLLKQKLTMGSVL 220
           ++++FL L  YY  FI NFAD+   +     K+  + T     D +FK LK  ++   +L
Sbjct: 441 EIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPIL 500

Query: 219 ILPDL*KPFDVYWDACGGKFRVVLMQD 139
            +PD  K F +  DA       VL QD
Sbjct: 501 KVPDFTKKFTLTTDASDVALGAVLSQD 527



 Score = 32.7 bits (73), Expect(2) = 1e-06
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -1

Query: 76  EKELLAVIHALSQWKHYLLGANFTV 2
           EKELLA++ A   ++HYLLG +F +
Sbjct: 549 EKELLAIVWATKTFRHYLLGRHFEI 573


>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
           transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1035

 Score = 37.7 bits (86), Expect(2) = 7e-04
 Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLG-----------------T 283
           P  + V  VRSFL L SYY  FI +FA    I  P  D   G                  
Sbjct: 409 PEPDCVYKVRSFLGLASYYRVFIKDFA---AIARPITDILKGENGSVSKHMSKKIPVEFN 465

Query: 282 *T*RDPSFKLLKQKLTMGSVLI-LPDL*KPFDVYWDACGGKFRVVLMQDARVVAM 121
            T R+ +F+ L+  L    V++  PD  KPFD+  DA       VL Q+ R + M
Sbjct: 466 ETQRN-AFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 519



 Score = 23.9 bits (50), Expect(2) = 7e-04
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = -1

Query: 76  EKELLAVIHALSQWKHYLLGA 14
           E+ELLA++ AL + +++L G+
Sbjct: 535 ERELLAIVWALGKLQNFLYGS 555



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -1

Query: 490 RSFLGLCSYYRLLIWNFVDTVARP 419
           RSFLGL SYYR+ I +F   +ARP
Sbjct: 418 RSFLGLASYYRVFIKDFA-AIARP 440


>sp|P92523|M860_ARATH Uncharacterized mitochondrial protein
           AtMg00860 OS=Arabidopsis thaliana GN=AtMg00860 PE=4 SV=1
          Length = 158

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMF-VITLP*KDHSLGT*T*RDPSFKLLKQKLT 235
           P  +N  ++R FL L  YY  F+ N+  +   +T   K +SL        +FK LK  +T
Sbjct: 58  PEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVT 117

Query: 234 MGSVLILPDL*KPF 193
              VL LPDL  PF
Sbjct: 118 TLPVLALPDLKLPF 131


>sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus
           GN=pol PE=3 SV=1
          Length = 1165

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
 Frame = -2

Query: 387 VRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RD--PSFKLLKQKLTMGSVLIL 214
           VR FL    +   +I  FA +     P    S+      +   +F  +K+ L     L L
Sbjct: 417 VREFLGTAGFCRLWIPGFASLAAPLYPLTKESIPFIWTEEHQQAFDHIKKALLSAPALAL 476

Query: 213 PDL*KPFDVYWDACGGKFRVVLMQ 142
           PDL KPF +Y D   G  R VL Q
Sbjct: 477 PDLTKPFTLYIDERAGVARGVLTQ 500


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
           transposon 297 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1059

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -1

Query: 76  EKELLAVIHALSQWKHYLLGANFTV 2
           EKELLA++ A   ++HYLLG  F +
Sbjct: 548 EKELLAIVWATKTFRHYLLGRQFLI 572


>sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia
           virus GN=pol PE=1 SV=2
          Length = 1199

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244
           PT +    +R FL    +   +I  FA+M     P      GT     P    +++ +KQ
Sbjct: 412 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFNWGPDQQKAYQEIKQ 469

Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142
            L     L LPDL KPF+++ D   G  + VL Q
Sbjct: 470 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 503


>sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia virus
           (isolate PVC-211) GN=pol PE=3 SV=1
          Length = 1204

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244
           PT +    +R FL    +   +I  FA+M     P      GT     P    +++ +KQ
Sbjct: 417 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFKWGPDQQKAYQEIKQ 474

Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142
            L     L LPDL KPF+++ D   G  + VL Q
Sbjct: 475 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 508


>sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia virus
           (isolate FB29) GN=pol PE=3 SV=1
          Length = 1204

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244
           PT +    +R FL    +   +I  FA+M     P      GT     P    +++ +KQ
Sbjct: 417 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFEWGPDQQKAYQEIKQ 474

Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142
            L     L LPDL KPF+++ D   G  + VL Q
Sbjct: 475 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 508


>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus
           GN=pol PE=3 SV=2
          Length = 1196

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFADMFVITLP*KDHSLGT*T*RDP----SFKLLKQ 244
           PT +    +R FL    +   +I  FA+M     P      GT     P    +++ +KQ
Sbjct: 412 PTPKTPRQLREFLGTAGFCRLWIPGFAEMAAPLYPLT--KTGTLFNWGPDQQKAYQEIKQ 469

Query: 243 KLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQ 142
            L     L LPDL KPF+++ D   G  + VL Q
Sbjct: 470 ALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQ 503


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
           transposon 412 OS=Drosophila melanogaster GN=POL PE=4
           SV=1
          Length = 1237

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
 Frame = -2

Query: 411 PTLENVLDVRSFLDLCSYYWHFISNFAD--MFVITLP*KDHSLGT*T*RDPSFKLLKQKL 238
           P   +    R F+  C+YY  FI NFAD    +  L  K+           +F  LK +L
Sbjct: 542 PVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQL 601

Query: 237 TMGSVLILPDL*KPFDVYWDACGGKFRVVLMQD 139
              ++L  PD  K F +  DA       VL Q+
Sbjct: 602 INPTLLQYPDFSKEFCITTDASKQACGAVLTQN 634
tr_hit_id Q0E1H7
Definition tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subsp. japonica
Align length 95
Score (bit) 66.2
E-value 2.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917617|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C03.
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subs...    66   2e-13
tr|Q8SA87|Q8SA87_MAIZE Putative polyprotein OS=Zea mays GN=Z195D...    65   4e-13
tr|Q01K20|Q01K20_ORYSA H0823A09.5 protein OS=Oryza sativa GN=H08...    63   8e-13
tr|Q5JPX0|Q5JPX0_ORYSA OSJNBa0085C10.21 protein OS=Oryza sativa ...    63   1e-12
tr|Q53NQ5|Q53NQ5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-12
tr|Q2QWQ0|Q2QWQ0_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-12
tr|Q53MK5|Q53MK5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    61   3e-12
tr|Q2QTE7|Q2QTE7_ORYSJ Retrotransposon protein, putative, Ty3-gy...    61   4e-12
tr|Q2QZE5|Q2QZE5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    64   6e-09
tr|Q9XEM5|Q9XEM5_ORYSI Polyprotein OS=Oryza sativa subsp. indica...    63   7e-09
tr|Q7XVP5|Q7XVP5_ORYSJ OSJNBa0023J03.1 protein OS=Oryza sativa s...    63   7e-09
tr|Q01M25|Q01M25_ORYSA OSIGBa0144J05.2 protein OS=Oryza sativa G...    63   7e-09
tr|Q01M09|Q01M09_ORYSA OSIGBa0096F13.1 protein OS=Oryza sativa G...    63   7e-09
tr|Q7XWM8|Q7XWM8_ORYSJ OSJNBb0052B05.1 protein (B1234D02.7 prote...    62   1e-08
tr|Q2QQC0|Q2QQC0_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08
tr|Q8W2Q1|Q8W2Q1_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    62   2e-08
tr|Q8SAZ4|Q8SAZ4_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    62   2e-08
tr|Q8S823|Q8S823_ORYSA Putative retroelement OS=Oryza sativa GN=...    62   2e-08
tr|Q8S789|Q8S789_ORYSA Putative retroelement OS=Oryza sativa GN=...    62   2e-08
tr|Q8LM98|Q8LM98_ORYSJ Putative retroelement OS=Oryza sativa sub...    62   2e-08
tr|Q8LLZ4|Q8LLZ4_ORYSJ Putative polyprotein (Retrotransposon pro...    62   2e-08
tr|Q7XWB7|Q7XWB7_ORYSJ OSJNBa0061A09.9 protein OS=Oryza sativa s...    62   2e-08
tr|Q7XRL9|Q7XRL9_ORYSJ OSJNBa0039G19.3 protein OS=Oryza sativa s...    62   2e-08
tr|Q7XFT3|Q7XFT3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08
tr|Q7XE62|Q7XE62_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08
tr|Q7G6D3|Q7G6D3_ORYSJ Putative polyprotein (Retrotransposon pro...    62   2e-08
tr|Q33A01|Q33A01_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08
tr|Q2R8V3|Q2R8V3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08
tr|Q2R4T1|Q2R4T1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08
tr|Q2R1T8|Q2R1T8_ORYSJ Retrotransposon protein, putative, Ty3-gy...    62   2e-08

>tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0442200 PE=4 SV=1
          Length = 683

 Score = 66.2 bits (160), Expect(2) = 2e-13
 Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -2

Query: 402 ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229
           +N  D+RSFL L  YY  FI NF+ +   +  L  K+         + SF+ LK+KLT  
Sbjct: 390 KNPSDIRSFLGLAGYYRRFIENFSKIAKPMTQLLKKNEKYVWSAECEQSFQTLKEKLTTA 449

Query: 228 SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
            VLILPD+ K FD+Y DA       VLMQ+ RVVA
Sbjct: 450 PVLILPDIHKSFDIYCDASRQGLGCVLMQEGRVVA 484



 Score = 32.0 bits (71), Expect(2) = 2e-13
 Identities = 11/21 (52%), Positives = 17/21 (80%)
 Frame = -1

Query: 79  YEKELLAVIHALSQWKHYLLG 17
           ++ EL +V+HAL  W+HYL+G
Sbjct: 500 HDLELASVVHALKIWRHYLIG 520


>tr|Q8SA87|Q8SA87_MAIZE Putative polyprotein OS=Zea mays
           GN=Z195D10.17 PE=4 SV=1
          Length = 343

 Score = 64.7 bits (156), Expect(2) = 4e-13
 Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = -2

Query: 396 VLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMGSV 223
           V +VRSFL L  YY  FI  FA +   + +L  K+           +F  LK++L    V
Sbjct: 57  VTEVRSFLGLVGYYRRFIEGFAKIAKSITSLLEKEREFKWDEKCQDNFDQLKKRLMSPPV 116

Query: 222 LILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
           L++PDL K FD+Y DACG   R VLMQ+  V+A
Sbjct: 117 LVMPDLQKGFDIYCDACGQGLRCVLMQEGHVIA 149



 Score = 32.7 bits (73), Expect(2) = 4e-13
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 79  YEKELLAVIHALSQWKHYLLGANFTV 2
           ++ EL AV+HAL  W+HY++G    V
Sbjct: 165 HDLELAAVVHALKIWRHYIMGTKCQV 190


>tr|Q01K20|Q01K20_ORYSA H0823A09.5 protein OS=Oryza sativa
            GN=H0823A09.5 PE=4 SV=1
          Length = 1716

 Score = 63.2 bits (152), Expect(2) = 8e-13
 Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = -2

Query: 438  WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265
            WTP         + V  +RSFL L  YY  FI NF+ +   +  L  KD      T  D 
Sbjct: 1069 WTPP--------KTVSQIRSFLGLARYYRRFIENFSRIARPMTQLLKKDEKFKWTTECDK 1120

Query: 264  SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
            SF+ LK+KL    VLILPD  K F VY DA       VLMQ+ RVVA
Sbjct: 1121 SFEELKKKLVSAPVLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVA 1167



 Score = 33.1 bits (74), Expect(2) = 8e-13
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 79   YEKELLAVIHALSQWKHYLLG 17
            ++ EL AV+HAL  W+HYL+G
Sbjct: 1183 HDLELAAVVHALKIWRHYLIG 1203


>tr|Q5JPX0|Q5JPX0_ORYSA OSJNBa0085C10.21 protein OS=Oryza sativa
            GN=OSJNBa0085C10.21 PE=4 SV=1
          Length = 1825

 Score = 62.8 bits (151), Expect(2) = 1e-12
 Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = -2

Query: 402  ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229
            + V  VRSFL L  YYW FI NF+ +   +  L  K+         + +F+ LK+KL   
Sbjct: 1113 KTVTQVRSFLGLAGYYWRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSS 1172

Query: 228  SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
             VLILPD  K F VY DA       VLMQD  VVA
Sbjct: 1173 PVLILPDTRKDFMVYCDASRQGLGCVLMQDGHVVA 1207



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 79   YEKELLAVIHALSQWKHYLLG 17
            ++ EL AV+HAL  W+HYL+G
Sbjct: 1223 HDLELAAVVHALKIWRHYLIG 1243


>tr|Q53NQ5|Q53NQ5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g07790 PE=4 SV=1
          Length = 1760

 Score = 61.6 bits (148), Expect(2) = 2e-12
 Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
 Frame = -2

Query: 438  WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265
            WTP         + V  +RSFL L  YY  FI NF+ +   +  L  KD         D 
Sbjct: 1058 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIARPMTRLLKKDEKFKWTAECDK 1109

Query: 264  SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
            SF+ LK+KL    VLILPD  K F VY DA       VLMQ+ RVVA
Sbjct: 1110 SFEELKKKLVSAPVLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVA 1156



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 79   YEKELLAVIHALSQWKHYLLG 17
            ++ EL AV+HAL  W+HYL+G
Sbjct: 1172 HDLELAAVVHALKIWRHYLIG 1192


>tr|Q2QWQ0|Q2QWQ0_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g08620 PE=4 SV=1
          Length = 1197

 Score = 61.6 bits (148), Expect(2) = 2e-12
 Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = -2

Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265
           WTP         + V  +RSFL L  YY  FI NF+ +   +  L  K+         D 
Sbjct: 696 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKNEKFKWTAECDQ 747

Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
           SF+ LK+KL    VLILPD  K F VY+DA       VLMQ+ RVVA
Sbjct: 748 SFEKLKKKLVTAPVLILPDQTKDFQVYYDASRHGLGCVLMQEGRVVA 794



 Score = 33.1 bits (74), Expect(2) = 2e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 79  YEKELLAVIHALSQWKHYLLG 17
           ++ EL AV+HAL  W+HYL+G
Sbjct: 810 HDLELAAVVHALKIWRHYLIG 830


>tr|Q53MK5|Q53MK5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g17230 PE=4 SV=1
          Length = 1285

 Score = 61.2 bits (147), Expect(2) = 3e-12
 Identities = 48/120 (40%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
 Frame = -2

Query: 438 WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265
           WTP         + V  +RSFL L  YY  FI NF+ +   +  L  KD         D 
Sbjct: 592 WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIAQPMTQLLKKDEKFKWTAECDK 643

Query: 264 SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVAMRTGYF*RLRELH 85
           SF+ LK+KL    VLILPD  K F VY DA       VLMQ+ RVVA  +      R+LH
Sbjct: 644 SFEELKKKLVSAPVLILPDQMKDFQVYCDASRLGLGCVLMQEGRVVAYAS------RQLH 697



 Score = 33.1 bits (74), Expect(2) = 3e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 79  YEKELLAVIHALSQWKHYLLG 17
           ++ EL AV+HAL  W+HYL+G
Sbjct: 706 HDLELAAVVHALKIWRHYLIG 726


>tr|Q2QTE7|Q2QTE7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g19900 PE=4 SV=1
          Length = 1791

 Score = 60.8 bits (146), Expect(2) = 4e-12
 Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = -2

Query: 402  ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229
            + V  +RSFL L  YYW FI NF+ +   +  L  K+         + +F+ LK+KL   
Sbjct: 1077 KTVTQIRSFLGLAGYYWRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSS 1136

Query: 228  SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
             VLILPD  K F VY DA       VLMQ+  VVA
Sbjct: 1137 PVLILPDTRKDFMVYCDASRQGLGCVLMQEGHVVA 1171



 Score = 33.1 bits (74), Expect(2) = 4e-12
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -1

Query: 79   YEKELLAVIHALSQWKHYLLG 17
            ++ EL AV+HAL  W+HYL+G
Sbjct: 1187 HDLELAAVVHALKIWRHYLIG 1207


>tr|Q2QZE5|Q2QZE5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g46270 PE=4 SV=1
          Length = 785

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = -2

Query: 402 ENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDPSFKLLKQKLTMG 229
           ++V +VRSFL L  YY  FI NF+ +   +  L  K+      T  + SF+ LK++LT  
Sbjct: 84  QSVPEVRSFLGLAGYYRRFIENFSRIARPMTQLLKKEQKFEWSTACEASFQELKRRLTTA 143

Query: 228 SVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
            VL++PD  K FD+Y DA       VLMQD +VVA
Sbjct: 144 PVLVMPDTRKGFDIYCDASHHGLGCVLMQDGKVVA 178



 Score = 35.8 bits (81), Expect = 1.3
 Identities = 44/165 (26%), Positives = 60/165 (36%), Gaps = 7/165 (4%)
 Frame = -1

Query: 490 RSFLGLCSYYRLLIWNFVDTVARPRLSYIGECA*RXXXXXXXXXXXXXXXXFCGYVRYYT 311
           RSFLGL  YYR  I NF   +ARP    + +                             
Sbjct: 90  RSFLGLAGYYRRFIENF-SRIARPMTQLLKK----------------------------- 119

Query: 310 PLERPFTWDLNLERSV------I*TAQAKVDHGVRIDSTRFVEAF*RLLGCLWG*ISSGL 149
             E+ F W    E S       + TA   V    R     + +A    LGC+        
Sbjct: 120 --EQKFEWSTACEASFQELKRRLTTAPVLVMPDTRKGFDIYCDASHHGLGCVLM-----Q 172

Query: 148 DARCPCSSYEDWILLKTKRVAY-FYEKELLAVIHALSQWKHYLLG 17
           D +    +      L+   V Y  ++ EL AV+HAL  W+HYL+G
Sbjct: 173 DGKVVAYASRQ---LRPHEVNYPTHDLELAAVVHALKIWRHYLIG 214


>tr|Q9XEM5|Q9XEM5_ORYSI Polyprotein OS=Oryza sativa subsp. indica PE=4
            SV=1
          Length = 1521

 Score = 63.2 bits (152), Expect = 7e-09
 Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
 Frame = -2

Query: 438  WTPLHAHDCPTLENVLDVRSFLDLCSYYWHFISNFADMF--VITLP*KDHSLGT*T*RDP 265
            WTP         + V  +RSFL L  YY  FI NF+ +   +  L  KD      T  D 
Sbjct: 805  WTPP--------KTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWTTECDK 856

Query: 264  SFKLLKQKLTMGSVLILPDL*KPFDVYWDACGGKFRVVLMQDARVVA 124
            SF+ LK+KL    VLILPD  K F VY DA       VLMQ+ RVVA
Sbjct: 857  SFEELKKKLVSAPVLILPDPTKDFQVYCDASRHGLGCVLMQEGRVVA 903



 Score = 33.9 bits (76), Expect = 4.8
 Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 6/164 (3%)
 Frame = -1

Query: 490  RSFLGLCSYYRLLIWNFVDTVARPRLSYIGECA*RXXXXXXXXXXXXXXXXFCGYVRYYT 311
            RSFLGL  YYR  I NF   +ARP    + +                             
Sbjct: 815  RSFLGLAGYYRRFIENF-SRIARPMTQLLKK----------------------------- 844

Query: 310  PLERPFTWDLNLERSVI*TAQAKVDHGVRI--DSTR----FVEAF*RLLGCLWG*ISSGL 149
              +  F W    ++S     +  V   V I  D T+    + +A    LGC+       L
Sbjct: 845  --DEKFKWTTECDKSFEELKKKLVSAPVLILPDPTKDFQVYCDASRHGLGCV-------L 895

Query: 148  DARCPCSSYEDWILLKTKRVAYFYEKELLAVIHALSQWKHYLLG 17
                   +Y    L   +     ++ EL AV+HAL  W+HYL+G
Sbjct: 896  MQEGRVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIG 939