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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917618
Clone id YMU001_000103_C04
Library
Length 394
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAAAATCACTATGCCAGAGCTGTGAGAGGGTAGGCATTTACGACTCGTTTATCTACAGTT
TCTCCATGGCAAAACAGTGAACAGCAGCAGTATTCATGGACATCGGAAATACTGTAAACT
AGTTGAGCAACTACAGAGCCACATAGACAAGCATCAAAGTACAGTTTTGGATTTACTTTG
GATGGGCGGGGGTCTGCCTTTGCAAATTGCCGTCAGTGGACAGAAGCTACAATACAAGCT
CTCAAATTGGCAGGCCTAGCCACCGAAAACAACTTCAAGGGACCAAATGAAGCAAAGCTG
ATGGCCACAAGGTACAAATAGACCCACCACAGCAAAAGCAGAGTTAATAGAACCACGAGC
GGAGGGATCTCCTTACCCGGAAACGTAGCTTTTA
■■Homology search results ■■ -
sp_hit_id P10761
Definition sp|P10761|ZP3_MOUSE Zona pellucida sperm-binding protein 3 OS=Mus musculus
Align length 46
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917618|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C04.
         (394 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10761|ZP3_MOUSE Zona pellucida sperm-binding protein 3 OS=Mu...    31   1.7  
sp|Q2KHM9|K0753_HUMAN Uncharacterized protein KIAA0753 OS=Homo s...    31   2.2  
sp|P85120|DAPLE_XENLA Daple-like protein OS=Xenopus laevis GN=cc...    30   2.9  
sp|P57944|GLPK_PASMU Glycerol kinase OS=Pasteurella multocida GN...    30   3.7  
sp|P06274|RPOC2_MARPO DNA-directed RNA polymerase subunit beta''...    30   4.9  
sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio...    29   6.4  

>sp|P10761|ZP3_MOUSE Zona pellucida sperm-binding protein 3 OS=Mus
           musculus GN=Zp3 PE=1 SV=4
          Length = 424

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
 Frame = +2

Query: 65  HGKTVNSSS----IHGHRKYCKLVEQLQSHI-DKHQSTVLDLLWMG 187
           HG   NSSS    IHG R++ KLV + + H+ D+   TV  L+++G
Sbjct: 325 HGNCSNSSSSQFQIHGPRQWSKLVSRNRRHVTDEADVTVGPLIFLG 370


>sp|Q2KHM9|K0753_HUMAN Uncharacterized protein KIAA0753 OS=Homo
           sapiens GN=KIAA0753 PE=2 SV=2
          Length = 967

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 230 QYKLSNWQA*PPKTTSRDQMKQS*WPQGTNRPTTAKAELIEPRAEGSPYPET 385
           Q  L  W +  PK   R    +  +PQ T+RP+ AK  L +     +  PET
Sbjct: 399 QKALERWPSTSPKGERRPLTAKDTFPQETSRPSVAKQLLADKYQPNTELPET 450


>sp|P85120|DAPLE_XENLA Daple-like protein OS=Xenopus laevis GN=ccdc88c
            PE=1 SV=1
          Length = 2058

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 28/95 (29%), Positives = 41/95 (43%)
 Frame = +1

Query: 73   NSEQQQYSWTSEIL*TS*ATTEPHRQASKYSFGFTLDGRGSAFANCRQWTEATIQALKLA 252
            N+   +  WTS +        E  R AS  S   TL GR  + ++     E  I    +A
Sbjct: 1552 NAGSSRVPWTSSL--------EVSRSASNSSSPLTLKGRPESVSS-----EDMIPTKDIA 1598

Query: 253  GLATENNFKGPNEAKLMATRYK*THHSKSRVNRTT 357
             L+ E+N   PN   L AT+     + +S VNR +
Sbjct: 1599 TLSRESNLYHPNAVMLGATK-----NRESPVNRNS 1628


>sp|P57944|GLPK_PASMU Glycerol kinase OS=Pasteurella multocida
           GN=glpK PE=3 SV=1
          Length = 502

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +1

Query: 229 TIQALKLAGLATENNFKGPNEAKLMATR 312
           T+QAL++ G ATENNF    +A ++AT+
Sbjct: 403 TLQALRVDGGATENNFLMQFQADILATK 430


>sp|P06274|RPOC2_MARPO DNA-directed RNA polymerase subunit beta''
            OS=Marchantia polymorpha GN=rpoC2 PE=3 SV=1
          Length = 1386

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +2

Query: 41   RLVYLQFLHGKTVNSSSIHGHRKYCKLVEQLQSHIDKHQSTVLDLLW--MGGGLPLQIAV 214
            +L +L  LH    NS S      Y KL+    S I K Q T  +  W  +     +   +
Sbjct: 972  KLGFLGNLHNIVTNSFSSFYLINYTKLISNKYSIITKFQHTCQNPKWYLIDESKKINKLI 1031

Query: 215  SGQKLQYKLSNW 250
             G+ + Y L NW
Sbjct: 1032 LGKHINYNLFNW 1043


>sp|Q6PGZ3|MIPT3_DANRE TRAF3-interacting protein 1 OS=Danio rerio
           GN=traf3ip1 PE=2 SV=1
          Length = 629

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +3

Query: 210 PSVDRSYNTSSQIGRPSHRKQLQGTK*SKADGHKVQIDPPQQKQS**NHERRDLLTRKR 386
           PS  RS +  ++ GR  HR + +     ++ G + Q DP Q K       +RD   R+R
Sbjct: 140 PSTSRSQDKENREGREHHRDREERKGIKESSGSREQKDPDQPKD---QESKRDDKDRRR 195
tr_hit_id A7P1T3
Definition tr|A7P1T3|A7P1T3_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera
Align length 54
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917618|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C04.
         (394 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P1T3|A7P1T3_VITVI Chromosome chr19 scaffold_4, whole genome...    35   2.4  
tr|A5DX54|A5DX54_LODEL Putative uncharacterized protein OS=Lodde...    33   5.4  
tr|Q2GRA9|Q2GRA9_CHAGB Putative uncharacterized protein OS=Chaet...    33   9.2  

>tr|A7P1T3|A7P1T3_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027744001
           PE=3 SV=1
          Length = 1180

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -2

Query: 354 GSINSAFAVVGLFVPCGHQLCFIWSLEVVFGG*ACQFESLYCSFCPLTAICKGR 193
           G IN  + + G+++   HQ C +WS EV F G       L C      A+C+GR
Sbjct: 133 GPINDRYGIAGIWI---HQHCAVWSPEVYFAG-------LGCLKNVRAALCRGR 176


>tr|A5DX54|A5DX54_LODEL Putative uncharacterized protein
           OS=Lodderomyces elongisporus GN=LELG_01941 PE=4 SV=1
          Length = 244

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +1

Query: 73  NSEQQQYSWTSEIL*TS*ATTEPHRQASKYSFGFTLDGRGSAFANCRQWTEATIQALKLA 252
           NS+    S T   L +   TT P   ASK +FGF   G GS F N  ++  A  ++LKL 
Sbjct: 8   NSDSTTSSTTGSTLTSK--TTNPKSPASKPAFGF---GSGSTFGNKSRFGNAFQESLKLK 62

Query: 253 GL----ATENNFKGPNEAK 297
                 +TE   +  N+ K
Sbjct: 63  SFLDADSTEATLESKNDTK 81


>tr|Q2GRA9|Q2GRA9_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_09495 PE=3 SV=1
          Length = 916

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = +1

Query: 49  LSTVSPWQNSEQQQYSWTSEIL*TS*ATTEPHR--QASKYSFGFTLDGRGSAFANCRQWT 222
           ++ V PW + E ++Y W         A    HR   A+ Y   F LD  GS         
Sbjct: 763 ITEVRPWVDMEHRRYLWAETKEGEIAALCVLHRLSPANGYQIKFALDFPGSPSGTIEALI 822

Query: 223 EATIQALKLAGL 258
            ATIQ L  AG+
Sbjct: 823 SATIQTLAKAGV 834