| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917619|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C05.
(332 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9BY71|LRRC3_HUMAN Leucine-rich repeat-containing protein 3 O... 32 0.99
sp|O42844|KCC2_SCHPO Calcium/calmodulin-dependent protein kinase... 30 2.9
sp|Q46IK0|THIC_PROMT Thiamine biosynthesis protein thiC OS=Proch... 30 4.9
sp|A2C559|THIC_PROM1 Thiamine biosynthesis protein thiC OS=Proch... 30 4.9
sp|Q92Q22|SYS_RHIME Seryl-tRNA synthetase OS=Rhizobium meliloti ... 30 4.9
sp|Q866Z6|GCNT3_SHEEP Beta-1,3-galactosyl-O-glycosyl-glycoprotei... 30 4.9
sp|Q1M0V6|GCNT3_BUBBU Beta-1,3-galactosyl-O-glycosyl-glycoprotei... 30 4.9
sp|Q7YQE1|GCNT3_BOVIN Beta-1,3-galactosyl-O-glycosyl-glycoprotei... 30 4.9
sp|Q866Z5|GCNT3_BOSMU Beta-1,3-galactosyl-O-glycosyl-glycoprotei... 30 4.9
sp|Q3AND3|THIC_SYNSC Thiamine biosynthesis protein thiC OS=Synec... 29 8.4
sp|Q3B0I6|THIC_SYNS9 Thiamine biosynthesis protein thiC OS=Synec... 29 8.4
sp|Q0IDV6|THIC_SYNS3 Thiamine biosynthesis protein thiC OS=Synec... 29 8.4
sp|A5GQ73|THIC_SYNR3 Thiamine biosynthesis protein thiC OS=Synec... 29 8.4
sp|Q7U9W2|THIC_SYNPX Thiamine biosynthesis protein thiC OS=Synec... 29 8.4
sp|A5GI51|THIC_SYNPW Thiamine biosynthesis protein thiC OS=Synec... 29 8.4
sp|Q6CP76|ATM_KLULA Serine/threonine-protein kinase TEL1 OS=Kluy... 29 8.4
>sp|Q9BY71|LRRC3_HUMAN Leucine-rich repeat-containing protein 3
OS=Homo sapiens GN=LRRC3 PE=1 SV=1
Length = 257
Score = 32.0 bits (71), Expect = 0.99
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 190 CYHMGYTCPMPCRHPQH 240
C H+G CP PCR P H
Sbjct: 26 CLHLGAACPQPCRCPDH 42
>sp|O42844|KCC2_SCHPO Calcium/calmodulin-dependent protein kinase
type II OS=Schizosaccharomyces pombe GN=cmk2 PE=1 SV=1
Length = 504
Score = 30.4 bits (67), Expect = 2.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 222 WHWACVSHVVACGHFPPRTTDTVDDVLSDEVTHEVIYFMP 103
W CV H + CG FPP + + D+ S V E + P
Sbjct: 277 WAMGCVLHTMLCG-FPPFFDENIKDLASKVVNGEFEFLSP 315
>sp|Q46IK0|THIC_PROMT Thiamine biosynthesis protein thiC
OS=Prochlorococcus marinus (strain NATL2A) GN=thiC PE=3
SV=1
Length = 466
Score = 29.6 bits (65), Expect = 4.9
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
Frame = -1
Query: 170 GLLTQWMMYYLMKSPM--RSSILC-LYKRH-CTHSL 75
G+L QWM+Y+ ++P+ R +C ++KR+ CT SL
Sbjct: 199 GILAQWMLYHYKQNPLFTRFDDICEIFKRYDCTFSL 234
>sp|A2C559|THIC_PROM1 Thiamine biosynthesis protein thiC
OS=Prochlorococcus marinus (strain NATL1A) GN=thiC PE=3
SV=1
Length = 466
Score = 29.6 bits (65), Expect = 4.9
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
Frame = -1
Query: 170 GLLTQWMMYYLMKSPM--RSSILC-LYKRH-CTHSL 75
G+L QWM+Y+ ++P+ R +C ++KR+ CT SL
Sbjct: 199 GILAQWMLYHYKQNPLFTRFDDICEIFKRYDCTFSL 234
>sp|Q92Q22|SYS_RHIME Seryl-tRNA synthetase OS=Rhizobium meliloti
GN=serS PE=3 SV=1
Length = 427
Score = 29.6 bits (65), Expect = 4.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 322 LYENIICRLLGSVGFGLRLGFFVRIFSSVEDAYMALGMCIPCG 194
L+ ++ G +GFG R + + ++ +DAY + C CG
Sbjct: 315 LHYRVMTLCTGDMGFGARKTYDLEVWLPGQDAYREISSCSVCG 357
>sp|Q866Z6|GCNT3_SHEEP Beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase 3 OS=Ovis aries
GN=GCNT3 PE=3 SV=1
Length = 440
Score = 29.6 bits (65), Expect = 4.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 219 HWACVSHVVACGHFPPRTTDTVDDVLSDEVTHEVIY 112
HW +H + F PR D V L + + H+ IY
Sbjct: 401 HWILQNHHLLANKFDPRVDDNVLQCLEEYLRHKAIY 436
>sp|Q1M0V6|GCNT3_BUBBU Beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase 3 OS=Bubalus
bubalis GN=GCNT3 PE=3 SV=1
Length = 440
Score = 29.6 bits (65), Expect = 4.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 219 HWACVSHVVACGHFPPRTTDTVDDVLSDEVTHEVIY 112
HW +H + F PR D V L + + H+ IY
Sbjct: 401 HWILQNHHLLANKFDPRVDDNVLQCLEEYLRHKAIY 436
>sp|Q7YQE1|GCNT3_BOVIN Beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase 3 OS=Bos taurus
GN=GCNT3 PE=1 SV=1
Length = 440
Score = 29.6 bits (65), Expect = 4.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 219 HWACVSHVVACGHFPPRTTDTVDDVLSDEVTHEVIY 112
HW +H + F PR D V L + + H+ IY
Sbjct: 401 HWILQNHHLLANKFDPRVDDNVLQCLEEYLRHKAIY 436
>sp|Q866Z5|GCNT3_BOSMU Beta-1,3-galactosyl-O-glycosyl-glycoprotein
beta-1,6-N-acetylglucosaminyltransferase 3 OS=Bos mutus
grunniens GN=GCNT3 PE=3 SV=1
Length = 440
Score = 29.6 bits (65), Expect = 4.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 219 HWACVSHVVACGHFPPRTTDTVDDVLSDEVTHEVIY 112
HW +H + F PR D V L + + H+ IY
Sbjct: 401 HWILQNHHLLANKFDPRVDDNVLQCLEEYLRHKAIY 436
>sp|Q3AND3|THIC_SYNSC Thiamine biosynthesis protein thiC
OS=Synechococcus sp. (strain CC9605) GN=thiC PE=3 SV=1
Length = 484
Score = 28.9 bits (63), Expect = 8.4
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 4/36 (11%)
Frame = -1
Query: 170 GLLTQWMMYYLMKSPM--RSSILC-LYKRH-CTHSL 75
G+L QWM+Y+ ++P+ R +C ++KR+ CT SL
Sbjct: 216 GILAQWMLYHHRQNPLYTRFDDICEIFKRYDCTFSL 251
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| Report |
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