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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917620
Clone id YMU001_000103_C07
Library
Length 328
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGTTTCATGCTTTAACACAAGATAGAGGCCCTGGGATGGGGTAGCAGCTTTTAGCTGTCT
TGGGAAGTAGGCTCAAAAATGCATGACGTTGCAACTTGACTCGACATGGTACTTGCCAAG
TGCTCTTCAACATGCTGCGGAATCATAAAATATGTATCTGCATTGTCGAGTATTGTCATT
ACAAAAAAACGGGTCTGCTGATGTGATCTTGAGCATGCGTCATAGATGAGTGATGCTTTT
AAATTATCTCTAGATGATCTGGCCATATAGAGCAGCATAGCTTGGTCTTATTGTGTGGGG
GATGCAAGCTTTAAAATACATGTTTGCG
■■Homology search results ■■ -
sp_hit_id Q4JTI5
Definition sp|Q4JTI5|METX_CORJK Homoserine O-acetyltransferase OS=Corynebacterium jeikeium (strain K411)
Align length 42
Score (bit) 30.4
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917620|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C07.
         (328 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4JTI5|METX_CORJK Homoserine O-acetyltransferase OS=Corynebac...    30   2.9  
sp|Q8E3Q6|Y1700_STRA3 UPF0348 protein gbs1700 OS=Streptococcus a...    30   3.8  
sp|Q3JZN3|Y1668_STRA1 UPF0348 protein SAK_1668 OS=Streptococcus ...    30   3.8  
sp|Q8DY37|Y1656_STRA5 UPF0348 protein SAG1656 OS=Streptococcus a...    30   3.8  
sp|P55259|GP2_HUMAN Pancreatic secretory granule membrane major ...    30   3.8  
sp|A6VN19|RECR_ACTSZ Recombination protein recR OS=Actinobacillu...    29   6.5  
sp|A2RRP1|NAG_HUMAN Neuroblastoma-amplified gene protein OS=Homo...    29   6.5  
sp|O68640|METX_CORGL Homoserine O-acetyltransferase OS=Corynebac...    29   8.5  

>sp|Q4JTI5|METX_CORJK Homoserine O-acetyltransferase
           OS=Corynebacterium jeikeium (strain K411) GN=metX PE=3
           SV=1
          Length = 395

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 182 VMTILDNADTYFMIPQHVEEHLASTMSSQVATSCIFEPTSQD 57
           V T++   DT  + P H +EHL+  +   +  S I  PT  D
Sbjct: 318 VPTMVVGVDTDILYPLHQQEHLSRNLGDFIGMSKITSPTGHD 359


>sp|Q8E3Q6|Y1700_STRA3 UPF0348 protein gbs1700 OS=Streptococcus
           agalactiae serotype III GN=gbs1700 PE=3 SV=1
          Length = 369

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 209 RSHQQTRFFVMTILDNADTYFMIPQHVEEHLASTMSSQVAT 87
           R HQ  RFFV   + N+D +   PQ V +   S +  Q+ T
Sbjct: 196 RKHQSDRFFVEKGMPNSDLFLNSPQVVWQDYFSLLKYQIMT 236


>sp|Q3JZN3|Y1668_STRA1 UPF0348 protein SAK_1668 OS=Streptococcus
           agalactiae serotype Ia GN=SAK_1668 PE=3 SV=1
          Length = 369

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 209 RSHQQTRFFVMTILDNADTYFMIPQHVEEHLASTMSSQVAT 87
           R HQ  RFFV   + N+D +   PQ V +   S +  Q+ T
Sbjct: 196 RKHQSDRFFVEKGMPNSDLFLNSPQVVWQDYFSLLKYQIMT 236


>sp|Q8DY37|Y1656_STRA5 UPF0348 protein SAG1656 OS=Streptococcus
           agalactiae serotype V GN=SAG1656 PE=3 SV=1
          Length = 369

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 209 RSHQQTRFFVMTILDNADTYFMIPQHVEEHLASTMSSQVAT 87
           R HQ  RFFV   + N+D +   PQ V +   S +  Q+ T
Sbjct: 196 RKHQSDRFFVEKGMPNSDLFLNSPQVVWQDYFSLLKYQIMT 236


>sp|P55259|GP2_HUMAN Pancreatic secretory granule membrane major
           glycoprotein GP2 OS=Homo sapiens GN=GP2 PE=2 SV=3
          Length = 537

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
 Frame = -3

Query: 305 ASPTQ*DQAMLL--YMARSSRDNLKASLIYDACSRSHQQTRFFVMTILDNADTYFMIPQH 132
           A+PT+ D+A L+  ++ R+S  N + S I+   +    ++RF V   +  A  Y ++  H
Sbjct: 403 ATPTE-DKADLVKYFIIRNSCSNQRDSTIHVEENGQSSESRFSVQMFMF-AGHYDLVFLH 460

Query: 131 VEEHLASTMSSQVATSC 81
            E HL  +++ Q   SC
Sbjct: 461 CEIHLCDSLNEQCQPSC 477


>sp|A6VN19|RECR_ACTSZ Recombination protein recR OS=Actinobacillus
           succinogenes (strain ATCC 55618 / 130Z) GN=recR PE=3
           SV=1
          Length = 200

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +3

Query: 3   FHALTQDRGPGMG*-QLLAVLGSRLKNA*RCN-LTRHGTCQVLFNMLRNHKICICIVE 170
           +H L +DR  GM   + L    S++ +  +C   T   TC +  N  R H   +C+VE
Sbjct: 30  YHLLQRDRSGGMNLARALTDAMSKIGHCSQCRTFTEQETCAICDNPRRQHSGLLCVVE 87


>sp|A2RRP1|NAG_HUMAN Neuroblastoma-amplified gene protein OS=Homo
           sapiens GN=NAG PE=1 SV=2
          Length = 2371

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 164 NADTYFMIPQHVEEHLASTMSSQVATSCIFEPTSQDS*KLL 42
           N D+  +IP H  +H A     ++A   + EP  QD  + L
Sbjct: 782 NGDSLMIIPWHEHKHRAKDWCEELACRMVVEPNLQDESEFL 822


>sp|O68640|METX_CORGL Homoserine O-acetyltransferase
           OS=Corynebacterium glutamicum GN=metX PE=1 SV=2
          Length = 377

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 182 VMTILDNADTYFMIPQHVEEHLASTMSSQVATSCIFEPTSQDS 54
           V  ++   DT  + P H +EHL+  + + +A + I  P   D+
Sbjct: 301 VPVLVAGVDTDILYPYHQQEHLSRNLGNLLAMAKIVSPVGHDA 343
tr_hit_id A3BSQ6
Definition tr|A3BSQ6|A3BSQ6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica
Align length 21
Score (bit) 33.1
E-value 7.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917620|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C07.
         (328 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3BSQ6|A3BSQ6_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.0  
tr|A7XK98|A7XK98_9HIV1 Envelope glycoprotein (Fragment) OS=Human...    33   9.1  
tr|Q23QZ3|Q23QZ3_TETTH Putative uncharacterized protein OS=Tetra...    33   9.2  

>tr|A3BSQ6|A3BSQ6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_026078 PE=4 SV=1
          Length = 368

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 292 NKTKLCCSIWPDHLEII*KHH 230
           N+ KLCCS WP  ++++  HH
Sbjct: 300 NEAKLCCSSWPSDIDVVVMHH 320


>tr|A7XK98|A7XK98_9HIV1 Envelope glycoprotein (Fragment) OS=Human
           immunodeficiency virus 1 GN=env PE=4 SV=1
          Length = 137

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -1

Query: 133 MLKSTWQVPCRVKLQRHAFLSLLPKTAKSCY--PIPGPLSC 17
           +  STW +PCR+K      +++  +  K+ Y  PI GP+SC
Sbjct: 97  LFNSTWTLPCRIK----QIVNMWQEVGKAMYAPPIRGPISC 133


>tr|Q23QZ3|Q23QZ3_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00997680 PE=4
           SV=1
          Length = 633

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 24/103 (23%), Positives = 41/103 (39%)
 Frame = -3

Query: 323 TCILKLASPTQ*DQAMLLYMARSSRDNLKASLIYDACSRSHQQTRFFVMTILDNADTYFM 144
           T +L++  P + +Q    + A   +      LI D    +   +  F   +L+ A  +  
Sbjct: 463 TQLLRMKEPKELEQFRQRFSAYLKKKKFNNKLIKDLLM-NQSYSAVFEFWLLNYAQDWLF 521

Query: 143 IPQHVEEHLASTMSSQVATSCIFEPTSQDS*KLLPHPRASILC 15
           I   VE   +  +  Q    CI +P   D  K+L +PR    C
Sbjct: 522 IHSKVENKDSHLIMLQYFQKCIGQPDQLDKLKVLKNPRKQSFC 564