BP917622
Clone id YMU001_000103_C09
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTGTTGAGGCAAGAGTTAGCTGCCCAATACTATACAAAATTGTACATGGTTAAATGGTCC
ACTACAGAAGGTGTGGTAAAAGTAAAATACTCATACACCCAACATATTTGCAAGGCAAAG
TACGTCAATGGTCTTTCCCTACTGAAGGTAGAAGCAAATGATGGGAGTATGGGAGGCATT
AAGACTCTGAGCCTCCCTGTTCAACCGCGCACAACCACCCTTGAAGTAGGTTAGAGACGA
TGGATGGCAAGTGAGCTCACATTCAAGGCTTCAAAATCCATCAAAACCTATACCAATGCC
ACATGCAGGTTTCAGCTGCAAGATTATGCATCGACAATTCATTCAGAAGATATAACCGCA
TTGCATTATACTTTTGCAAAAACCTGTCTGCACACATTGTTCTGCTTTTTTTCATTTGCA
TTCTCCAATCTGATAGGTCCAATTATTTCTGTCTCCCTTTGCATGCCAGATGCTGTATAT
ATACTAGCCATATATGCA
■■Homology search results ■■ -
sp_hit_id Q5UQ44
Definition sp|Q5UQ44|YR390_MIMIV Uncharacterized protein R390 OS=Acanthamoeba polyphaga mimivirus
Align length 27
Score (bit) 30.8
E-value 3.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917622|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C09.
(498 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5UQ44|YR390_MIMIV Uncharacterized protein R390 OS=Acanthamoe... 31 3.6
sp|P47344|Y098_MYCGE Uncharacterized protein MG098 OS=Mycoplasma... 31 3.6
sp|Q8MQW8|SPRI_DROME Protein sprint OS=Drosophila melanogaster G... 31 3.7
sp|Q6PLS1|POLG_ASGVK Genome polyprotein OS=Apple stem grooving v... 30 8.2
sp|Q06FL4|CEMA_PELHO Chloroplast envelope membrane protein OS=Pe... 30 8.2

>sp|Q5UQ44|YR390_MIMIV Uncharacterized protein R390 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R390 PE=4 SV=1
Length = 763

Score = 30.8 bits (68), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3

Query: 373 KYNAMRLYLLNELSMHNLAAETCMWHW 293
KY R ++ N L +NL ETC WH+
Sbjct: 173 KYGPNRYFIRNILRKYNLIDETCNWHY 199


>sp|P47344|Y098_MYCGE Uncharacterized protein MG098 OS=Mycoplasma
genitalium GN=MG098 PE=3 SV=1
Length = 477

Score = 30.8 bits (68), Expect = 3.6
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3

Query: 264 QGFKIHQNLYQCHMQVSAARLCIDNSFRRYNRIALYFCKNLSAHIVLLFFICILQSDRSN 443
Q Q+ Q ++ +A+ L S +RY +I YF + +V+L+F+ I++ N
Sbjct: 195 QNLSAFQSNDQIVLRFNASPLNFSISLQRYVQIIFYFAMVVIITMVVLYFVWIIKQKHFN 254

Query: 444 Y 446
Y
Sbjct: 255 Y 255


>sp|Q8MQW8|SPRI_DROME Protein sprint OS=Drosophila melanogaster
GN=spri PE=1 SV=2
Length = 1790

Score = 30.8 bits (68), Expect = 3.7
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1

Query: 136 SLLKVEANDGSMGGIKTLSLPVQPRTTTLEV 228
S+L+V D G ++T +LPV+P TTT EV
Sbjct: 1692 SVLRVIIPDECNGSLQTRTLPVRPHTTTREV 1722


>sp|Q6PLS1|POLG_ASGVK Genome polyprotein OS=Apple stem grooving virus
(strain Korea) PE=3 SV=1
Length = 2105

Score = 29.6 bits (65), Expect = 8.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1

Query: 1 LLRQELAAQYYTKLYMVKWSTTEGVVKVKYSYTQHICKAKYVNGLSLLKVEANDGSMGGI 180
L RQ A ++ + +W + T H C + V+ + +LK E ++G+ G
Sbjct: 1786 LHRQSAAVKHLNTMKRSRWRSW---------ITNHRCFWRKVHRMCILKKECSEGTRSGG 1836

Query: 181 KTLSLP 198
+ LSLP
Sbjct: 1837 RALSLP 1842


>sp|Q06FL4|CEMA_PELHO Chloroplast envelope membrane protein
OS=Pelargonium hortorum GN=cemA-A PE=3 SV=1
Length = 229

Score = 29.6 bits (65), Expect = 8.2
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1

Query: 331 STIHSEDITALHYTFAKTCLHTLFCFFSFAFSNLIGPIISV 453
S +H++ + +L + LHT++ F++F + N + P + V
Sbjct: 180 SVVHNDQMRSLLVCLFPSVLHTIYYFWTFNYLNCVSPSLVV 220


tr_hit_id Q5KCS4
Definition tr|Q5KCS4|Q5KCS4_CRYNE Protein kinase SNF, putative OS=Cryptococcus neoformans
Align length 43
Score (bit) 33.5
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917622|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_C09.
(498 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5KCS4|Q5KCS4_CRYNE Protein kinase SNF, putative OS=Cryptococ... 33 5.7
tr|A0C5X4|A0C5X4_PARTE Chromosome undetermined scaffold_150, who... 33 7.4
tr|Q6CJK5|Q6CJK5_KLULA KLLA0F17930p OS=Kluyveromyces lactis GN=K... 33 7.5
tr|B1YM63|B1YM63_EXIS2 Putative uncharacterized protein OS=Exigu... 33 9.7
tr|B2GVU2|B2GVU2_BURPS Putative lipoprotein OS=Burkholderia pseu... 33 9.7

>tr|Q5KCS4|Q5KCS4_CRYNE Protein kinase SNF, putative OS=Cryptococcus
neoformans GN=CNBL2060 PE=4 SV=1
Length = 1412

Score = 33.5 bits (75), Expect = 5.7
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1

Query: 94 YTQHICKAKYVNGLSLLKVEANDGSMGGIKTLSLPVQPRTTTL 222
+T +CK K + GL +LK++ G++ K + V RTTTL
Sbjct: 1368 FTVELCKMKNLPGLFILKIKRTKGNLWSFKFIYQTVIERTTTL 1410


>tr|A0C5X4|A0C5X4_PARTE Chromosome undetermined scaffold_150, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00035320001 PE=4 SV=1
Length = 1130

Score = 33.1 bits (74), Expect = 7.4
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = -1

Query: 423 ECK*KKAEQCVQTGFCKSIMQC--GYIF*MNCRCI------ILQLKPACGIG--IGFDGF 274
+CK + E C + I++C GY F +N +C+ I+ + C G I FDG
Sbjct: 479 QCKFQCIEDCNICDQGQCILKCEDGYKF-VNNKCLSVCGDSIVTKEEECDDGNTIKFDG- 536

Query: 273 *SLECELTCHPSSLTYFKGGCARLNREAQSLNAS 172
+CE +C + ++G C N + Q LN++
Sbjct: 537 -CFQCEYSCPENCYVCYQGTCLECNDQYQLLNSN 569


>tr|Q6CJK5|Q6CJK5_KLULA KLLA0F17930p OS=Kluyveromyces lactis
GN=KLLA0F17930g PE=4 SV=1
Length = 1664

Score = 33.1 bits (74), Expect = 7.5
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2

Query: 263 SRLQNPSKPIPMPHAGFSCKIMHRQFIQKI*PHCIILLQKPVCTHCSAFFHLHSPI**VQ 442
S L + SKP+ P G ++ R F++ + IL+Q+ + HLHSP+ +Q
Sbjct: 254 SLLLDASKPVVSPEPG----LLIRSFVRCLEDENEILIQRGILDLLLQRLHLHSPL--LQ 307

Query: 443 LFLSPFACQML 475
+ + P C++L
Sbjct: 308 VLVKPSDCRLL 318


>tr|B1YM63|B1YM63_EXIS2 Putative uncharacterized protein
OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
13490 / 255-15) GN=Exig_2572 PE=4 SV=1
Length = 430

Score = 32.7 bits (73), Expect = 9.7
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1

Query: 1 LLRQELAAQ--YYTKLYMVKWSTTEGVVKVKYSYTQHICKAKYVNGLSL 141
LLR +L A YT YMV+W+ + V + ++Y ++ + +GL++
Sbjct: 177 LLRDQLVALGIVYTLYYMVRWTLDKSVASLTFAYLGYLISTMFHSGLAI 225


>tr|B2GVU2|B2GVU2_BURPS Putative lipoprotein OS=Burkholderia
pseudomallei 1655 GN=BURPS1655_A2039 PE=4 SV=1
Length = 398

Score = 32.7 bits (73), Expect = 9.7
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +1

Query: 262 FKASKSIKTYTNATCRFQLQDYASTIHSEDITALHYTFAKTCLHTLFCFFSFAFSNLIGP 441
F A+ S+ + C Q + T+ S + + TF T LF F+FAF++L GP
Sbjct: 303 FFANASLPQCGSWFCPASTQTFDITLSSGNGASKATTFQVTSSQVLFSTFNFAFNDLAGP 362

Query: 442 IISV 453
I +V
Sbjct: 363 IGNV 366