BP917631
Clone id YMU001_000103_D09
Library
Length 348
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATACAAACTGATACACTAAGCACATTGAGTGCAAGTACCAGACTCACAAGAGCTGCAATT
CCATCATTAGGTTCTCTCAATCTATCCTCACGTAACGAGGGCTTCCTCACCTGGCATAGA
AAACAGATCCTGGCCTGACTATCTTGAAGACCATACTGCAACAAACAAAGAGAGATTCCT
CATCAACAACTGCCATTGATACCAAAAAGATCACCTGTACATACATGACTTCTTAAGATG
TCAAAGATCCGTTAAACTGAAATATCCAAGCAATGGCCAAAATAAGCAATATCCCTACAA
AGCTGTGTGCAGAACTCACAGAAGGCCACAGGAAATACACATGGAAAT
■■Homology search results ■■ -
sp_hit_id P16761
Definition sp|P16761|PP85_HCMVA Phosphoprotein 85 OS=Human cytomegalovirus (strain AD169)
Align length 28
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917631|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_D09.
(348 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P16761|PP85_HCMVA Phosphoprotein 85 OS=Human cytomegalovirus ... 30 3.7
sp|O60103|YOX7_SCHPO Putative E3 ubiquitin-protein ligase C14F5.... 30 4.8
sp|P55028|TYRP1_CARAU 5,6-dihydroxyindole-2-carboxylic acid oxid... 29 8.2
sp|A0B9N3|SYP_METTP Prolyl-tRNA synthetase OS=Methanosaeta therm... 29 8.3
sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sat... 29 8.3

>sp|P16761|PP85_HCMVA Phosphoprotein 85 OS=Human cytomegalovirus
(strain AD169) GN=UL25 PE=3 SV=1
Length = 656

Score = 30.0 bits (66), Expect = 3.7
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2

Query: 167 CLLQYGLQDSQARICFLCQVRKPSLRED 84
C LQ+ LQ S + +C+L V+ PSLRED
Sbjct: 433 CYLQHQLQ-SISELCYLIYVQLPSLRED 459


>sp|O60103|YOX7_SCHPO Putative E3 ubiquitin-protein ligase C14F5.07
OS=Schizosaccharomyces pombe GN=SPBC14F5.07 PE=1 SV=1
Length = 1242

Score = 29.6 bits (65), Expect = 4.8
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = -3

Query: 301 FVGILLILAIAWIFQFNGSLTS*EVMYV---QVIFL---VSMAVVDEESLFVCCSMVFKI 140
F GILL + + F+ + VM V Q IFL + + + E ++F+ SMV KI
Sbjct: 678 FCGILLSMCLIGTFKKLAAENLLNVMTVYPAQSIFLAWFIGITFMFEFAVFI--SMVRKI 735

Query: 139 VRPGSVFYAR 110
VRPG +++ R
Sbjct: 736 VRPGVLYFLR 745


>sp|P55028|TYRP1_CARAU 5,6-dihydroxyindole-2-carboxylic acid oxidase
OS=Carassius auratus GN=tyrp1 PE=2 SV=1
Length = 522

Score = 28.9 bits (63), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1

Query: 64 SLGSLNLSSRNEGFLTWHRKQIL 132
S G ++ S GFLTWHR +L
Sbjct: 197 SFGGVDFSHEGPGFLTWHRYHLL 219


>sp|A0B9N3|SYP_METTP Prolyl-tRNA synthetase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=proS PE=3 SV=1
Length = 478

Score = 28.9 bits (63), Expect = 8.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2

Query: 218 YIHDFLRCQRSVKLKYPSNGQNKQYPYKAVCRTH 319
+ H+ LR V ++YP G + YP+ R+H
Sbjct: 20 WYHELLRSAEIVDVRYPVKGMSVWYPFGFALRSH 53


>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa
subsp. japonica GN=CM-LOX1 PE=2 SV=2
Length = 924

Score = 28.9 bits (63), Expect = 8.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2

Query: 257 LKYPSNGQNKQYPYKAVCRTHRRPQE 334
L P G NKQ+PY CRT R P +
Sbjct: 278 LARPVLGGNKQFPYPRRCRTGRPPSK 303


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917631|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_D09.
(348 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******