BP917634 |
Clone id |
YMU001_000103_D12 |
Library |
YMU01 |
Length |
452 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000103_D12. |
Accession |
BP917634 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAAATCAACTCATTTATGCACTTCTTCAGCACTTCAAAGAGCCCCATACAGATCTTCCCC CTTTATTTTGTTTGTGCGTCGTCCAAAGTACCATATGCCCTCACAACGGTGAACGCCCAT ACACGACTTGACTATCTCTGATTTTCCAATGTATGAAGGTTGGTTTGATGATTCTTGATT TTTTTTCTTCAAAAGAAACCAATACTCCTTGAGTAGCTCCTAAATTTCATCTTCCTCATC GAATGGGTCAAGCTCGGGATAGTCTCCAACCTGTACTTTGTCAGGTCGTACCATCACTCC ATGGCCAGGAAGGCAACAAAAGTACCTTGTCCCCTTCACCATGCCATCATGCTTGCCTAC TGGCTCATCATACTGCACTCCAATCCAGTGACCCGATCATAAGTTTTCAGCCAATCCAAC AAACATTACTATGCCTCTCTTTCCTCCTGGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9D1E6 |
Definition |
sp|Q9D1E6|TBCB_MOUSE Tubulin folding cofactor B OS=Mus musculus |
Align length |
62 |
Score (bit) |
74.3 |
E-value |
2.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SZK9 |
Definition |
tr|A9SZK9|A9SZK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
65 |
Score (bit) |
106.0 |
E-value |
5.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917634|Adiantum capillus-veneris mRNA, clone: YMU001_000103_D12. (452 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SZK9|A9SZK9_PHYPA Predicted protein OS=Physcomitrella paten... 106 5e-22 tr|Q7XK99|Q7XK99_ORYSJ OSJNBb0020J19.11 protein (Putative unchar... 102 7e-21 tr|Q0J8Q8|Q0J8Q8_ORYSJ Os04g0692100 protein OS=Oryza sativa subs... 102 7e-21 tr|B8AS44|B8AS44_ORYSI Putative uncharacterized protein OS=Oryza... 102 7e-21 tr|A9PB57|A9PB57_POPTR Putative uncharacterized protein OS=Popul... 101 2e-20 tr|A5CFZ4|A5CFZ4_HORVD Tubulin folding cofactor B (Fragment) OS=... 101 2e-20 tr|B6TFP6|B6TFP6_MAIZE Tubulin-specific chaperone B OS=Zea mays ... 101 2e-20 tr|B4FE98|B4FE98_MAIZE Putative uncharacterized protein OS=Zea m... 101 2e-20 tr|B4FDB0|B4FDB0_MAIZE Putative uncharacterized protein OS=Zea m... 101 2e-20 tr|Q9SS34|Q9SS34_ARATH Putative cytoskeleton-associated protein ... 100 4e-20 tr|Q8L5R5|Q8L5R5_ARATH Tubulin folding cofactor B OS=Arabidopsis... 100 4e-20 tr|Q67Z52|Q67Z52_ARATH Tubulin folding cofactor B OS=Arabidopsis... 100 4e-20 tr|Q67XW4|Q67XW4_ARATH Tubulin folding cofactor B OS=Arabidopsis... 100 4e-20 tr|A7QJK1|A7QJK1_VITVI Chromosome chr8 scaffold_106, whole genom... 100 5e-20 tr|A8JDW7|A8JDW7_CHLRE Tubulin folding cofactor B OS=Chlamydomon... 87 4e-16 tr|Q388K4|Q388K4_9TRYP Tubulin-specific chaperone, putative OS=T... 84 3e-15 tr|Q4E5F9|Q4E5F9_TRYCR Tubulin-specific chaperone, putative OS=T... 84 5e-15 tr|Q3KPK1|Q3KPK1_XENLA MGC132396 protein OS=Xenopus laevis GN=tb... 82 2e-14 tr|Q6NU87|Q6NU87_XENLA MGC81145 protein OS=Xenopus laevis GN=MGC... 81 2e-14 tr|B0CT99|B0CT99_LACBS Predicted protein OS=Laccaria bicolor (st... 80 4e-14 tr|A4RTP2|A4RTP2_OSTLU Predicted protein OS=Ostreococcus lucimar... 79 9e-14 tr|Q5KME4|Q5KME4_CRYNE Tubulin-folding cofactor B, putative (Put... 79 1e-13 tr|A8N8L9|A8N8L9_COPC7 Putative uncharacterized protein OS=Copri... 79 1e-13 tr|Q01DE6|Q01DE6_OSTTA Cytoskeleton-associated protein and relat... 78 3e-13 tr|A4H9F4|A4H9F4_LEIBR Tubulin-specific chaperone, putative OS=L... 77 4e-13 tr|A7S7S7|A7S7S7_NEMVE Predicted protein OS=Nematostella vectens... 77 6e-13 tr|Q803K6|Q803K6_DANRE Tubulin folding cofactor B OS=Danio rerio... 76 1e-12 tr|A8E5P1|A8E5P1_DANRE Tubulin folding cofactor B OS=Danio rerio... 76 1e-12 tr|A8DZJ0|A8DZJ0_DANRE Novel protein (Zgc:55620) OS=Danio rerio ... 76 1e-12 tr|Q4QDZ6|Q4QDZ6_LEIMA Tubulin-specific chaperone, putative OS=L... 76 1e-12
>tr|A9SZK9|A9SZK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137947 PE=4 SV=1 Length = 256
Score = 106 bits (265), Expect = 5e-22 Identities = 46/65 (70%), Positives = 55/65 (84%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PGGKRG V FVG E L +G+W+GVQYDEPVGKHDG+VKG RYF C PGHG ++RPDK++ Sbjct: 180 PGGKRGEVKFVGKVEVLAAGYWVGVQYDEPVGKHDGVVKGKRYFTCPPGHGSILRPDKLK 239
Query: 270 VGDYP 256 VGD+P Sbjct: 240 VGDFP 244
>tr|Q7XK99|Q7XK99_ORYSJ OSJNBb0020J19.11 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBb0020J19.11 PE=4 SV=2 Length = 110
Score = 102 bits (255), Expect = 7e-21 Identities = 46/65 (70%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 36 PGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVK 95
Query: 270 VGDYP 256 VGDYP Sbjct: 96 VGDYP 100
>tr|Q0J8Q8|Q0J8Q8_ORYSJ Os04g0692100 protein OS=Oryza sativa subsp. japonica GN=Os04g0692100 PE=4 SV=1 Length = 246
Score = 102 bits (255), Expect = 7e-21 Identities = 46/65 (70%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 172 PGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVK 231
Query: 270 VGDYP 256 VGDYP Sbjct: 232 VGDYP 236
>tr|B8AS44|B8AS44_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18050 PE=4 SV=1 Length = 245
Score = 102 bits (255), Expect = 7e-21 Identities = 46/65 (70%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 172 PGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVK 231
Query: 270 VGDYP 256 VGDYP Sbjct: 232 VGDYP 236
>tr|A9PB57|A9PB57_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 243
Score = 101 bits (252), Expect = 2e-20 Identities = 45/65 (69%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG+V +VG AE+L G W+GVQ+DEP GKHDGMVKG RYF P HG M+RPDKV+ Sbjct: 169 PGEKRGVVKYVGRAESLAPGFWVGVQFDEPFGKHDGMVKGVRYFDSPPLHGAMIRPDKVK 228
Query: 270 VGDYP 256 VGDYP Sbjct: 229 VGDYP 233
>tr|A5CFZ4|A5CFZ4_HORVD Tubulin folding cofactor B (Fragment) OS=Hordeum vulgare var. distichum GN=tfc B PE=2 SV=1 Length = 232
Score = 101 bits (252), Expect = 2e-20 Identities = 45/65 (69%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 157 PGAKRGTVKFVGKAEALGRGFWVGVQYDEPLGKHDGMVKGVRFFECPQGHGAIVRPEKVK 216
Query: 270 VGDYP 256 VGD+P Sbjct: 217 VGDFP 221
>tr|B6TFP6|B6TFP6_MAIZE Tubulin-specific chaperone B OS=Zea mays PE=2 SV=1 Length = 245
Score = 101 bits (251), Expect = 2e-20 Identities = 45/65 (69%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 169 PGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVK 228
Query: 270 VGDYP 256 VGD+P Sbjct: 229 VGDFP 233
>tr|B4FE98|B4FE98_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 158
Score = 101 bits (251), Expect = 2e-20 Identities = 45/65 (69%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 54 PGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVK 113
Query: 270 VGDYP 256 VGD+P Sbjct: 114 VGDFP 118
>tr|B4FDB0|B4FDB0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 131
Score = 101 bits (251), Expect = 2e-20 Identities = 45/65 (69%), Positives = 52/65 (80%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG V FVG AE L G W+GVQYDEP+GKHDGMVKG R+F C GHG +VRP+KV+ Sbjct: 54 PGAKRGTVKFVGRAEALGRGFWVGVQYDEPLGKHDGMVKGIRFFECPQGHGAIVRPEKVK 113
Query: 270 VGDYP 256 VGD+P Sbjct: 114 VGDFP 118
>tr|Q9SS34|Q9SS34_ARATH Putative cytoskeleton-associated protein OS=Arabidopsis thaliana GN=F14P13.18 PE=4 SV=1 Length = 240
Score = 100 bits (249), Expect = 4e-20 Identities = 45/65 (69%), Positives = 54/65 (83%) Frame = -3
Query: 450 PGGKRGIVMFVGLAENL*SGHWIGVQYDEPVGKHDGMVKGTRYFCCLPGHGVMVRPDKVQ 271 PG KRG+V +VG AE+L G+W+G+QYDEP+GKHDGMVKGTR+F C G MVRPDKV+ Sbjct: 166 PGEKRGMVKYVGRAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVK 225
Query: 270 VGDYP 256 VGDYP Sbjct: 226 VGDYP 230
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