BP917636 |
Clone id |
YMU001_000103_E03 |
Library |
YMU01 |
Length |
495 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000103_E03. |
Accession |
BP917636 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL604Contig1 |
Sequence |
GCTTGTCTTCTTCGTCGTTAATCCTTTTCACTTCCAAATTCTTGTTTTCTAGGAGGAGCT CTGTTTGCTTTAGCTTTGCCTCTACCTTTTTCAACTCATCATCTAGCTCTTCAAGTGCTT TCTCTCTGGCACGCTCAGTAACCTTTAATGCTTTAATTTCTGCTTGGGCTTCCTGAAGTT CCCTATCTTTATCTCGAACGTCATTTTCAAGACGAGTCAACTCCACTTTTAAAGGATTAG AGCCATGAAGCAGGTTGAAAGCATCCTCTGTGTCCAAATTTTGCTTTGCTCCACTTCTGC GCTTAGCTTTTCCTTCAGATTTAACCACAGTTATGGGCGGATATACTACACCATCAAGAT GAAGGGCCAGCATATCACTGTTGTTGTGTGGAAAGTTTTCATCCTTTTGAATTTGAAGAG TATCCTCAGACATTGCGCTGGAAAACTGCAAAAACAAGACAGGAACTCTGTAATTCTCAG GTTGAAACCAGAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9WUU9 |
Definition |
sp|Q9WUU9|MCM3A_MOUSE 80 kDa MCM3-associated protein OS=Mus musculus |
Align length |
97 |
Score (bit) |
38.5 |
E-value |
0.016 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P3V5 |
Definition |
tr|A7P3V5|A7P3V5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
115 |
Score (bit) |
90.9 |
E-value |
3.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917636|Adiantum capillus-veneris mRNA, clone: YMU001_000103_E03. (477 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P3V5|A7P3V5_VITVI Chromosome chr1 scaffold_5, whole genome ... 91 3e-17 tr|B6U1S0|B6U1S0_MAIZE ATMAP70-3 OS=Zea mays PE=2 SV=1 84 3e-15 tr|Q653N3|Q653N3_ORYSJ Os06g0251700 protein OS=Oryza sativa subs... 80 4e-14 tr|B8B0D2|B8B0D2_ORYSI Putative uncharacterized protein OS=Oryza... 80 4e-14 tr|B7ZZU6|B7ZZU6_MAIZE Putative uncharacterized protein OS=Zea m... 79 9e-14 tr|Q9ZUA3|Q9ZUA3_ARATH Putative myosin heavy chain-like protein ... 79 1e-13 tr|A9SYA5|A9SYA5_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|Q9LQU7|Q9LQU7_ARATH F10B6.24 (70 kDa microtubule associated p... 77 3e-13 tr|Q6Z746|Q6Z746_ORYSJ Os02g0736100 protein OS=Oryza sativa subs... 77 3e-13 tr|B8AI31|B8AI31_ORYSI Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|A3AB50|A3AB50_ORYSJ Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|Q84VC2|Q84VC2_ORYSJ Putative myosin heavy chain (Fragment) OS... 76 7e-13 tr|Q2QLI6|Q2QLI6_ORYSJ Os12g0640900 protein OS=Oryza sativa subs... 76 7e-13 tr|B8BN81|B8BN81_ORYSI Putative uncharacterized protein OS=Oryza... 76 7e-13 tr|A3CJW0|A3CJW0_ORYSJ Putative uncharacterized protein OS=Oryza... 76 7e-13 tr|Q9C9X0|Q9C9X0_ARATH Putative uncharacterized protein T23K23.9... 75 2e-12 tr|A9RVX1|A9RVX1_PHYPA Predicted protein (Fragment) OS=Physcomit... 74 3e-12 tr|A7QJH6|A7QJH6_VITVI Chromosome chr8 scaffold_106, whole genom... 74 4e-12 tr|A5AJJ7|A5AJJ7_VITVI Putative uncharacterized protein OS=Vitis... 74 4e-12 tr|Q9FXK0|Q9FXK0_ARATH F5A9.19 OS=Arabidopsis thaliana PE=4 SV=1 71 3e-11 tr|Q8L7S4|Q8L7S4_ARATH At1g68060/T23K23_9 OS=Arabidopsis thalian... 71 3e-11 tr|Q3MQ34|Q3MQ34_ARATH 70 kDa microtubule associated protein Typ... 71 3e-11 tr|A3BAB2|A3BAB2_ORYSJ Putative uncharacterized protein OS=Oryza... 66 8e-10 tr|A9TW40|A9TW40_PHYPA Predicted protein (Fragment) OS=Physcomit... 61 3e-08 tr|A9TH17|A9TH17_PHYPA Predicted protein (Fragment) OS=Physcomit... 60 4e-08 tr|A9RMM2|A9RMM2_PHYPA Predicted protein OS=Physcomitrella paten... 60 5e-08 tr|A9RMM3|A9RMM3_PHYPA Predicted protein OS=Physcomitrella paten... 51 3e-05 tr|B6U2C6|B6U2C6_MAIZE ATMAP70-2 OS=Zea mays PE=2 SV=1 44 0.003 tr|Q10PZ6|Q10PZ6_ORYSJ Os03g0215700 protein OS=Oryza sativa subs... 44 0.005 tr|A3AFH3|A3AFH3_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.005
>tr|A7P3V5|A7P3V5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030592001 PE=4 SV=1 Length = 637
Score = 90.9 bits (224), Expect = 3e-17 Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 4/115 (3%) Frame = -3
Query: 340 PPITVVKS----EGKAKRRSGAKQNLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQ 173 PP+TV +S +G ++RR+ + +LD ++ NLLHGS+P+KVEL RLEN+VRDKDREL Sbjct: 40 PPLTVSQSFKEGKGSSRRRASVRPSLDADEFINLLHGSDPVKVELNRLENEVRDKDRELG 99
Query: 172 EAQAEIKALKVTERARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVKRINDEE 8 EAQAEIKAL+ +ER R E+K+INDE+ Sbjct: 100 EAQAEIKALRFSERLREKAVEEITEELSKVEEKLKLTESLLESKNLEIKKINDEK 154
>tr|B6U1S0|B6U1S0_MAIZE ATMAP70-3 OS=Zea mays PE=2 SV=1 Length = 590
Score = 84.3 bits (207), Expect = 3e-15 Identities = 40/64 (62%), Positives = 51/64 (79%) Frame = -3
Query: 316 EGKAKRRSGAKQNLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKALKVT 137 +G A+RR + LD +D L+HGS+P+KVEL RLEN+VRDKDREL EA AEIKAL+++ Sbjct: 15 KGSARRRGPVQAGLDADDLLTLMHGSDPVKVELNRLENEVRDKDRELGEAHAEIKALRLS 74
Query: 136 ERAR 125 ERAR Sbjct: 75 ERAR 78
>tr|Q653N3|Q653N3_ORYSJ Os06g0251700 protein OS=Oryza sativa subsp. japonica GN=P0431E05.19 PE=2 SV=1 Length = 608
Score = 80.5 bits (197), Expect = 4e-14 Identities = 44/106 (41%), Positives = 62/106 (58%) Frame = -3
Query: 325 VKSEGKAKRRSGAKQNLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKAL 146 V G A+RR + +LD ++ L+HGS+P++VELTRLEN++RDK+REL EAQ EI+AL Sbjct: 11 VAPRGPARRRGTVRASLDADEFIALMHGSDPVRVELTRLENELRDKERELGEAQTEIRAL 70
Query: 145 KVTERARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVKRINDEE 8 +++ERAR EVK+INDE+ Sbjct: 71 RLSERAREKAVEELTDELEKMFEKLKLTESLLDSKNLEVKKINDEK 116
>tr|B8B0D2|B8B0D2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22392 PE=4 SV=1 Length = 608
Score = 80.5 bits (197), Expect = 4e-14 Identities = 44/106 (41%), Positives = 62/106 (58%) Frame = -3
Query: 325 VKSEGKAKRRSGAKQNLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKAL 146 V G A+RR + +LD ++ L+HGS+P++VELTRLEN++RDK+REL EAQ EI+AL Sbjct: 11 VAPRGPARRRGTVRASLDADEFIALMHGSDPVRVELTRLENELRDKERELGEAQTEIRAL 70
Query: 145 KVTERARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVKRINDEE 8 +++ERAR EVK+INDE+ Sbjct: 71 RLSERAREKAVEELTDELEKMFEKLKLTESLLDSKNLEVKKINDEK 116
>tr|B7ZZU6|B7ZZU6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 592
Score = 79.3 bits (194), Expect = 9e-14 Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 2/66 (3%) Frame = -3
Query: 316 EGKAKRRSGAKQNLDTEDAFNLLHGSNPLKVELTRLENDVR--DKDRELQEAQAEIKALK 143 +G A+RR + LD +D L+HGS+P+KVEL RLEN+VR DKDREL EA AEIKAL+ Sbjct: 15 KGSARRRGPVQAGLDADDLLTLMHGSDPVKVELNRLENEVRVLDKDRELGEAHAEIKALR 74
Query: 142 VTERAR 125 ++ERAR Sbjct: 75 LSERAR 80
>tr|Q9ZUA3|Q9ZUA3_ARATH Putative myosin heavy chain-like protein (70 kDa microtubule associated protein Type 3) OS=Arabidopsis thaliana GN=map70-3 PE=2 SV=1 Length = 629
Score = 79.0 bits (193), Expect = 1e-13 Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%) Frame = -3
Query: 319 SEGKAKRRSGAKQNLDTEDAF-NLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKALK 143 S+G +RRS K + D ++ F LLHGS+P+KVEL RLENDVRDKDREL E+QAEIKAL+ Sbjct: 46 SKGLTRRRS-MKPSFDADNEFITLLHGSDPVKVELNRLENDVRDKDRELSESQAEIKALR 104
Query: 142 VTERAR 125 ++ER R Sbjct: 105 LSERQR 110
>tr|A9SYA5|A9SYA5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189721 PE=4 SV=1 Length = 623
Score = 78.6 bits (192), Expect = 1e-13 Identities = 39/68 (57%), Positives = 49/68 (72%) Frame = -3
Query: 328 VVKSEGKAKRRSGAKQNLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKA 149 + +S+ +R+S + DTED NLLHGS+P+KVEL RLEN+VRDKDR+L EA AE K Sbjct: 38 LTRSDSNTRRKSVVRACPDTEDLLNLLHGSDPVKVELNRLENEVRDKDRKLAEATAECKV 97
Query: 148 LKVTERAR 125 LK ER R Sbjct: 98 LKQRERLR 105
>tr|Q9LQU7|Q9LQU7_ARATH F10B6.24 (70 kDa microtubule associated protein Type 4) OS=Arabidopsis thaliana GN=map70-4 PE=2 SV=1 Length = 604
Score = 77.4 bits (189), Expect = 3e-13 Identities = 39/66 (59%), Positives = 54/66 (81%), Gaps = 1/66 (1%) Frame = -3
Query: 319 SEGKAKRRSGAKQNLDTEDAF-NLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKALK 143 S+G ++RRS + + D ++ F NLLHGS+P+++EL RLEN+VRDKDREL E QAEIKAL+ Sbjct: 22 SKGMSRRRS-MRPSFDADNEFMNLLHGSDPVRIELNRLENEVRDKDRELSEGQAEIKALR 80
Query: 142 VTERAR 125 ++ER R Sbjct: 81 LSERQR 86
>tr|Q6Z746|Q6Z746_ORYSJ Os02g0736100 protein OS=Oryza sativa subsp. japonica GN=P0487D09.19-1 PE=2 SV=1 Length = 599
Score = 77.4 bits (189), Expect = 3e-13 Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Frame = -3
Query: 313 GKAKRRSGAKQ-NLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKALKVT 137 G A+RR + LD ++ L+HGS+P+KVEL RLEN+VRDKDREL +A AEIKAL+++ Sbjct: 17 GSARRRGAVQPAGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLS 76
Query: 136 ERAR 125 ERAR Sbjct: 77 ERAR 80
>tr|B8AI31|B8AI31_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08848 PE=4 SV=1 Length = 599
Score = 77.4 bits (189), Expect = 3e-13 Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 1/64 (1%) Frame = -3
Query: 313 GKAKRRSGAKQ-NLDTEDAFNLLHGSNPLKVELTRLENDVRDKDRELQEAQAEIKALKVT 137 G A+RR + LD ++ L+HGS+P+KVEL RLEN+VRDKDREL +A AEIKAL+++ Sbjct: 17 GSARRRGAVQPAGLDADELLTLMHGSDPVKVELNRLENEVRDKDRELGDAHAEIKALRLS 76
Query: 136 ERAR 125 ERAR Sbjct: 77 ERAR 80
|