BP917637 |
Clone id |
YMU001_000103_E08 |
Library |
YMU01 |
Length |
309 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000103_E08. |
Accession |
BP917637 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCCACTCTTGGGTTCACGGCAGCCAGCTTCATGGAAAGAAACTCCACTTGCCTTTGGAG AGACTGCACATAGTTAATTATCTCATCCAGCATCACAGCTTTGCCAGTTACCTTGCTACA ACCAGGCACAAGGTCCTGCAAAAATTTCATTCTCTCACTGATCTTTTCTCGCCGAACCCT CTCTGCAAGGCTGTGACTATCTGTGGCTTGGCCTCTCCTTGCTCTCACATGAATAAAATC TGGCTTCGGTGCTTCTGGGGGCTTGGAGGTTTCTTTGGCAGACTTAGGGGTTGACTCTTC TGAGTTCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LK48 |
Definition |
sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana |
Align length |
92 |
Score (bit) |
157.0 |
E-value |
1.0e-38 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TN45 |
Definition |
tr|A9TN45|A9TN45_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
103 |
Score (bit) |
168.0 |
E-value |
1.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917637|Adiantum capillus-veneris mRNA, clone: YMU001_000103_E08. (309 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TN45|A9TN45_PHYPA Predicted protein (Fragment) OS=Physcomit... 168 1e-40 tr|B8LLM2|B8LLM2_PICSI Putative uncharacterized protein OS=Picea... 167 2e-40 tr|A5AD41|A5AD41_VITVI Putative uncharacterized protein OS=Vitis... 166 4e-40 tr|A9TAG1|A9TAG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 6e-39 tr|A9TYX4|A9TYX4_PHYPA Predicted protein (Fragment) OS=Physcomit... 162 1e-38 tr|A7P900|A7P900_VITVI Chromosome chr3 scaffold_8, whole genome ... 160 4e-38 tr|A7PNA9|A7PNA9_VITVI Chromosome chr1 scaffold_22, whole genome... 158 1e-37 tr|A9TPG3|A9TPG3_PHYPA Predicted protein OS=Physcomitrella paten... 157 3e-37 tr|B4G0X6|B4G0X6_MAIZE Putative uncharacterized protein OS=Zea m... 156 4e-37 tr|A9PEQ2|A9PEQ2_POPTR Putative uncharacterized protein OS=Popul... 156 4e-37 tr|Q69JJ6|Q69JJ6_ORYSJ Os09g0474100 protein OS=Oryza sativa subs... 156 6e-37 tr|A3BZV4|A3BZV4_ORYSJ Putative uncharacterized protein OS=Oryza... 156 6e-37 tr|B6UFP6|B6UFP6_MAIZE Putative uncharacterized protein OS=Zea m... 154 2e-36 tr|Q5VR96|Q5VR96_ORYSJ Os06g0275600 protein OS=Oryza sativa subs... 154 2e-36 tr|B8B0K5|B8B0K5_ORYSI Putative uncharacterized protein OS=Oryza... 154 2e-36 tr|Q71SQ1|Q71SQ1_CATRO MYC1 OS=Catharanthus roseus GN=myc1 PE=2 ... 154 3e-36 tr|Q70KS8|Q70KS8_ORYSJ TA1 protein (Fragment) OS=Oryza sativa su... 154 3e-36 tr|Q5N802|Q5N802_ORYSJ cDNA clone:J033022O19, full insert sequen... 154 3e-36 tr|B8BCQ2|B8BCQ2_ORYSI Putative uncharacterized protein OS=Oryza... 154 3e-36 tr|B8A855|B8A855_ORYSI Putative uncharacterized protein OS=Oryza... 154 3e-36 tr|A9TT60|A9TT60_PHYPA Predicted protein OS=Physcomitrella paten... 154 3e-36 tr|A3A0W1|A3A0W1_ORYSJ Putative uncharacterized protein OS=Oryza... 154 3e-36 tr|B6UFP4|B6UFP4_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1 153 5e-36 tr|A9NUY0|A9NUY0_PICSI Putative uncharacterized protein OS=Picea... 153 5e-36 tr|B6U6D0|B6U6D0_MAIZE BHLH transcription factor OS=Zea mays PE=... 151 1e-35 tr|B4FNR8|B4FNR8_MAIZE Putative uncharacterized protein OS=Zea m... 151 1e-35 tr|B4FEL0|B4FEL0_MAIZE Putative uncharacterized protein OS=Zea m... 151 1e-35 tr|A7PUT5|A7PUT5_VITVI Chromosome chr4 scaffold_32, whole genome... 151 2e-35 tr|B4FIY8|B4FIY8_MAIZE Putative uncharacterized protein OS=Zea m... 150 2e-35 tr|B4FIT4|B4FIT4_MAIZE Putative uncharacterized protein OS=Zea m... 150 2e-35
>tr|A9TN45|A9TN45_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48267 PE=4 SV=1 Length = 160
Score = 168 bits (426), Expect = 1e-40 Identities = 84/103 (81%), Positives = 95/103 (92%), Gaps = 1/103 (0%) Frame = -1
Query: 306 NSEESTPKSAKETSKPPE-APKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 130 + + ++P+S K TSKPP+ K D+IHVRARRGQATDSHSLAERVRREKISERMKFLQDL Sbjct: 42 SGDSASPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 101
Query: 129 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 VPGCSK+TGKAVMLDEIINYVQSLQRQ+EFLSMKLAAVNPR++ Sbjct: 102 VPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLD 144
>tr|B8LLM2|B8LLM2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 605
Score = 167 bits (424), Expect = 2e-40 Identities = 86/99 (86%), Positives = 91/99 (91%) Frame = -1
Query: 297 ESTPKSAKETSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 118 ES+PK K+ K PE PK D+IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC Sbjct: 382 ESSPKQTKDIVKTPEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 440
Query: 117 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VNPR++ Sbjct: 441 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 479
>tr|A5AD41|A5AD41_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005183 PE=4 SV=1 Length = 569
Score = 166 bits (421), Expect = 4e-40 Identities = 84/99 (84%), Positives = 91/99 (91%) Frame = -1
Query: 297 ESTPKSAKETSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 118 + K +K+ KPPEAPK D+IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC Sbjct: 350 DGNQKQSKDNPKPPEAPK-DYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 408
Query: 117 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 +KVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VNPR++ Sbjct: 409 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMD 447
>tr|A9TAG1|A9TAG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48139 PE=4 SV=1 Length = 162
Score = 162 bits (411), Expect = 6e-39 Identities = 87/99 (87%), Positives = 90/99 (90%), Gaps = 1/99 (1%) Frame = -1
Query: 303 SEESTPKSAKETSKPPE-APKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 127 S ST K A TSKPP+ PK D+IHVRARRGQATDSHSLAERVRREKISERMKFLQDLV Sbjct: 52 SPRSTLKGA--TSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLV 109
Query: 126 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNP 10 PGCSKVTGKAVMLDEIINYVQSLQRQ+EFLSMKLAAVNP Sbjct: 110 PGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNP 148
>tr|A9TYX4|A9TYX4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_36721 PE=4 SV=1 Length = 164
Score = 162 bits (409), Expect = 1e-38 Identities = 86/104 (82%), Positives = 93/104 (89%), Gaps = 2/104 (1%) Frame = -1
Query: 306 NSEEST-PKSAKETSKPPE-APKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQD 133 NS +S P S K +SK + PK D+IHVRARRGQATDSHSLAERVRREKISERMKFLQD Sbjct: 45 NSGDSVGPSSLKASSKSVQNLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQD 104
Query: 132 LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 LVPGCSKVTGKAVMLDEIINYVQSLQRQ+EFLSMKLAAVNPR++ Sbjct: 105 LVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRLD 148
>tr|A7P900|A7P900_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036369001 PE=4 SV=1 Length = 392
Score = 160 bits (404), Expect = 4e-38 Identities = 79/95 (83%), Positives = 89/95 (93%) Frame = -1
Query: 285 KSAKETSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVT 106 +++ +TSK E KPD+IHVRARRGQATDSHSLAERVRREKISERMK+LQDLVPGC+K+T Sbjct: 173 ETSADTSKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIT 232
Query: 105 GKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 GKA MLDEIINYVQSLQRQVEFLSMKLAAVNPR++ Sbjct: 233 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 267
>tr|A7PNA9|A7PNA9_VITVI Chromosome chr1 scaffold_22, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021166001 PE=4 SV=1 Length = 521
Score = 158 bits (400), Expect = 1e-37 Identities = 79/99 (79%), Positives = 90/99 (90%) Frame = -1
Query: 297 ESTPKSAKETSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 118 ++T K K+ ++ + PK ++IHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGC Sbjct: 304 KNTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGC 363
Query: 117 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VNPR++ Sbjct: 364 SKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 402
>tr|A9TPG3|A9TPG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148564 PE=4 SV=1 Length = 221
Score = 157 bits (396), Expect = 3e-37 Identities = 84/102 (82%), Positives = 90/102 (88%), Gaps = 1/102 (0%) Frame = -1
Query: 303 SEESTPKSAKETSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 124 S ST K A + +P + PK D+IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP Sbjct: 40 SPRSTLKGAT-SKRPQDFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVP 98
Query: 123 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVN-PRVE 1 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLA VN PR++ Sbjct: 99 GCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNVPRLD 140
>tr|B4G0X6|B4G0X6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 460
Score = 156 bits (395), Expect = 4e-37 Identities = 81/103 (78%), Positives = 90/103 (87%), Gaps = 1/103 (0%) Frame = -1
Query: 306 NSEESTPKSAKE-TSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 130 NS+ K K+ SKPPE PK D+IHVRARRG+ATDSHSLAERVRREKIS+RMK LQDL Sbjct: 226 NSDNGGKKQGKDGASKPPEPPK-DYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 284
Query: 129 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 VPGC+KV GKAVMLDEIINYVQSLQRQVEFLSMKLA VNP+++ Sbjct: 285 VPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQLD 327
>tr|A9PEQ2|A9PEQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 348
Score = 156 bits (395), Expect = 4e-37 Identities = 79/95 (83%), Positives = 86/95 (90%) Frame = -1
Query: 285 KSAKETSKPPEAPKPDFIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVT 106 K K+ S + PK ++IHVRARRGQAT+SHSLAERVRREKISERMKFLQDLVPGCSKVT Sbjct: 131 KQGKQGSLGSDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVT 190
Query: 105 GKAVMLDEIINYVQSLQRQVEFLSMKLAAVNPRVE 1 GKAVMLDEIINYVQSLQRQVEFLSMKLA VNPR++ Sbjct: 191 GKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLD 225
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