BP917644 [AcEST]

BP917644
Clone id	YMU001_000103_F04
Library	YMU01
Length	517
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000103_F04.
Accession	BP917644
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GGGACCCACTCTGATGGGGCCCAAAGTTAATAAAGAAGGACCCGCGCACACAAGCCATAG CGTAGTTGTTGATGATGTGGCAACTGTACGGTCGCCGCGATTTACGTTGACTGTTGTACA GATAGCCTGCAATTCGTGCTAACAAGCACTGACAGCTTTTGAAGGCTAGATACTTTTGAA ACTAGATGCTTTTTAGTTTGATGCTTTTCATGTACTCCTTTTCATGGCCAAAAGGCCTTA AAATATGTGCCAAGGACTGATTCTTTGGCATGCACCCACATAGAGGTGCAGACCAAAAAG TACCGGTGTTGTACTGAGTTGAAGCAATATATAGAAATACGGAAAGGGGTGGGAGTGGAA CTCTGCCACTACGCGTCTCGTGTGTCGTGCATCTCTTTCAGTCAACTTGTTATTGAAGTG CTTAAAGTTTGTTTCGTATATTCTCTTTAGTATGCGTGTGGTGCCGTACTGTTGTAGTGG TATCAAAGTTCAAGTCGTGTACTTTTCTGAAAGCATA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q90511
Definition	sp\|Q90511\|EI2BB_FUGRU Translation initiation factor eIF-2B subunit beta OS=Fugu rubripes
Align length	32
Score (bit)	32.0
E-value	1.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917644\|Adiantum capillus-veneris mRNA, clone: YMU001_000103_F04. (517 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q90511\|EI2BB_FUGRU Translation initiation factor eIF-2B subun... 32 1.8 >sp\|Q90511\|EI2BB_FUGRU Translation initiation factor eIF-2B subunit beta OS=Fugu rubripes GN=eif2b2 PE=3 SV=1 Length = 355 Score = 32.0 bits (71), Expect = 1.8 Identities = 16/32 (50%), Positives = 22/32 (68%) Frame = +3 Query: 285 GADQKVPVLY*VEAIYRNTERGGSGTLPLRVS 380 GAD++V + +EA + +RGGSGT PLR S Sbjct: 3 GADKEVDLTERIEAFLSDLKRGGSGTGPLRGS 34
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q800K7
Definition	tr\|Q800K7\|Q800K7_PAROL Tumor necrosis factor receptor-2 OS=Paralichthys olivaceus
Align length	103
Score (bit)	33.5
E-value	6.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917644\|Adiantum capillus-veneris mRNA, clone: YMU001_000103_F04. (517 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q800K7\|Q800K7_PAROL Tumor necrosis factor receptor-2 OS=Paral... 33 6.5 >tr\|Q800K7\|Q800K7_PAROL Tumor necrosis factor receptor-2 OS=Paralichthys olivaceus GN=TNFR-2 PE=2 SV=1 Length = 483 Score = 33.5 bits (75), Expect = 6.5 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Frame = +1 Query: 76 CGNCTVAAIYVDCCTDSLQFVLTSTDSFRLDTFETRCFLVCFSCTPFHGQKALKYVPR 255 C C + C+D+ + V DS ++ + + C SC K L+Y R Sbjct: 41 CKKCPPGQRLIQKCSDATESVCKQCDSGQYMEKWN---YAQKCLSCNKCKSNKGLQYAQR 97 Query: 256 TDSLACTHIEVQTKKY-------RCCTELKQYIEIRKGVGVEL 363 S T + Y C E + Y + R G GV L Sbjct: 98 CSSTTRTGCVCKPGMYCIMDFDNPYCAECRNYSQCRAGYGVSL 140