BP917647 |
Clone id |
YMU001_000103_F10 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000103_F10. |
Accession |
BP917647 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4174Contig1 |
Sequence |
GGTGTGCCCACACCAACTGGATGGCATTACCACCTCGATCTTACAACATAACAAAAGCAG CAGCGGCACCCTCTCCATTTGGGGGGACTACAACTCATATTCTCATTCCCGGAAACATGT CTACAGTACCCAAACCTAAAATCCAAAGAAACCAAGCTCACTTGCTCGTTCTTTCTCAAA AGTCTCAAAGTATTGGTAAATGATGGTGACAGCCAGTAATATCCCAGTTCCCGATCCAAT AGCCCCCATAAAATCCGCAACAACAGTTAAAGCACCAATGCACATTCCACCAAATGCAGC TGCTGTTGGGATGTAGCGGTTAAGTTCCTTTTGTAAATTTGACTCTCTATGGCCTGGCAT CACCATTTGTTGCTCCTTGAGCTGCTTTGCAACATCACGAGCTGACGACCCAGAAACTTC GATCCAAGTCTTTGAGAAAAGTGCACATGCAGTCAGCATGAAAACAAGATAGAAAAGAGC ATGAAACGGATTTGCAGCAATTTCAGCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54XK2 |
Definition |
sp|Q54XK2|SC61A_DICDI Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum |
Align length |
117 |
Score (bit) |
194.0 |
E-value |
2.0e-49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKZ6 |
Definition |
tr|B8LKZ6|B8LKZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
118 |
Score (bit) |
235.0 |
E-value |
1.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917647|Adiantum capillus-veneris mRNA, clone: YMU001_000103_F10. (493 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKZ6|B8LKZ6_PICSI Putative uncharacterized protein OS=Picea... 235 1e-60 tr|A7R1K2|A7R1K2_VITVI Chromosome undetermined scaffold_359, who... 233 4e-60 tr|A7P222|A7P222_VITVI Chromosome chr19 scaffold_4, whole genome... 233 4e-60 tr|Q9SE40|Q9SE40_PHAVU Putative integral membrane protein OS=Pha... 232 6e-60 tr|Q9LP58|Q9LP58_ARATH Putative uncharacterized protein F28N24.2... 231 1e-59 tr|Q8RWJ5|Q8RWJ5_ARATH Putative uncharacterized protein At1g2931... 231 1e-59 tr|O80774|O80774_ARATH Putative uncharacterized protein At2g3425... 231 1e-59 tr|A9TUA0|A9TUA0_PHYPA Predicted protein OS=Physcomitrella paten... 231 1e-59 tr|A9PG45|A9PG45_POPTR Putative uncharacterized protein OS=Popul... 231 2e-59 tr|Q6ES90|Q6ES90_ORYSJ Putative Sec61 OS=Oryza sativa subsp. jap... 230 3e-59 tr|Q6ES11|Q6ES11_ORYSJ Os09g0347700 protein OS=Oryza sativa subs... 230 3e-59 tr|Q10Q18|Q10Q18_ORYSJ Os03g0213100 protein OS=Oryza sativa subs... 230 3e-59 tr|Q0J2F7|Q0J2F7_ORYSJ Os09g0347500 protein (Fragment) OS=Oryza ... 230 3e-59 tr|B8BEQ0|B8BEQ0_ORYSI Putative uncharacterized protein OS=Oryza... 230 3e-59 tr|B8BEP9|B8BEP9_ORYSI Putative uncharacterized protein OS=Oryza... 230 3e-59 tr|B8A2Y6|B8A2Y6_MAIZE Putative uncharacterized protein OS=Zea m... 230 3e-59 tr|B8A1R6|B8A1R6_MAIZE Putative uncharacterized protein OS=Zea m... 230 3e-59 tr|B4FL58|B4FL58_MAIZE Putative uncharacterized protein OS=Zea m... 230 3e-59 tr|A3BXT8|A3BXT8_ORYSJ Putative uncharacterized protein OS=Oryza... 230 3e-59 tr|A3BXT7|A3BXT7_ORYSJ Putative uncharacterized protein OS=Oryza... 230 3e-59 tr|A2XDW4|A2XDW4_ORYSI Putative uncharacterized protein OS=Oryza... 230 3e-59 tr|A9SSP0|A9SSP0_PHYPA Predicted protein OS=Physcomitrella paten... 229 4e-59 tr|Q8LB07|Q8LB07_ARATH Putative uncharacterized protein OS=Arabi... 227 3e-58 tr|B6TIE9|B6TIE9_MAIZE Putative uncharacterized protein OS=Zea m... 226 4e-58 tr|Q94B06|Q94B06_HORVU Sec61 alpha subunit OS=Hordeum vulgare PE... 225 8e-58 tr|Q9LLR4|Q9LLR4_WHEAT Sec61p OS=Triticum aestivum GN=sec61 PE=2... 224 1e-57 tr|Q9ZV90|Q9ZV90_ARATH F9K20.24 protein OS=Arabidopsis thaliana ... 221 1e-56 tr|A4S7Q7|A4S7Q7_OSTLU IISP family transporter: protein transpor... 198 1e-49 tr|Q00UZ9|Q00UZ9_OSTTA Putative Sec61 alpha form 2 [Oryza sativa... 197 2e-49 tr|A8IEL6|A8IEL6_CHLRE SEC61-alpha subunit of ER-translocon OS=C... 192 7e-48
>tr|B8LKZ6|B8LKZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 478
Score = 235 bits (599), Expect = 1e-60 Identities = 116/118 (98%), Positives = 117/118 (99%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHALFYL FMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 361 NPFHALFYLTFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 420
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGGMCIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF Sbjct: 421 IPTAAAFGGMCIGALTVMADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 478
>tr|A7R1K2|A7R1K2_VITVI Chromosome undetermined scaffold_359, whole genome shotgun sequence (Chromosome undetermined scaffold_1001, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00005279001 PE=3 SV=1 Length = 476
Score = 233 bits (594), Expect = 4e-60 Identities = 114/118 (96%), Positives = 117/118 (99%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHALFYL+FML ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRE+NLQKELNRY Sbjct: 359 NPFHALFYLIFMLAACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHREANLQKELNRY 418
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGGMCIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF Sbjct: 419 IPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
>tr|A7P222|A7P222_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027847001 PE=3 SV=1 Length = 476
Score = 233 bits (594), Expect = 4e-60 Identities = 114/118 (96%), Positives = 117/118 (99%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHALFYL+FML ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRE+NLQKELNRY Sbjct: 359 NPFHALFYLIFMLAACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHREANLQKELNRY 418
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGGMCIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF Sbjct: 419 IPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
>tr|Q9SE40|Q9SE40_PHAVU Putative integral membrane protein OS=Phaseolus vulgaris GN=sec61 PE=2 SV=1 Length = 476
Score = 232 bits (592), Expect = 6e-60 Identities = 114/118 (96%), Positives = 118/118 (100%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHALFYLVFML+ACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 359 NPFHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRY 418
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF Sbjct: 419 IPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
>tr|Q9LP58|Q9LP58_ARATH Putative uncharacterized protein F28N24.2 OS=Arabidopsis thaliana GN=At1g29310 PE=3 SV=1 Length = 475
Score = 231 bits (589), Expect = 1e-59 Identities = 113/118 (95%), Positives = 118/118 (100%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 +PFHALFY+VFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 358 HPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 417
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF Sbjct: 418 IPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>tr|Q8RWJ5|Q8RWJ5_ARATH Putative uncharacterized protein At1g29310 OS=Arabidopsis thaliana GN=At1g29310 PE=2 SV=1 Length = 475
Score = 231 bits (589), Expect = 1e-59 Identities = 113/118 (95%), Positives = 118/118 (100%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 +PFHALFY+VFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 358 HPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 417
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF Sbjct: 418 IPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>tr|O80774|O80774_ARATH Putative uncharacterized protein At2g34250 (At2g34250/F13P17.9) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g34250 PE=2 SV=1 Length = 475
Score = 231 bits (589), Expect = 1e-59 Identities = 113/118 (95%), Positives = 118/118 (100%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 +PFHALFY+VFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 358 HPFHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 417
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF Sbjct: 418 IPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>tr|A9TUA0|A9TUA0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225537 PE=3 SV=1 Length = 477
Score = 231 bits (589), Expect = 1e-59 Identities = 113/118 (95%), Positives = 116/118 (98%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHA+FYL FMLTACALFSKTWIEVSGSSARDVAKQLKEQQM MPGHRESNLQ+ELNRY Sbjct: 360 NPFHAIFYLTFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMFMPGHRESNLQRELNRY 419
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETF+KERASELGFFGF Sbjct: 420 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFDKERASELGFFGF 477
>tr|A9PG45|A9PG45_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 476
Score = 231 bits (588), Expect = 2e-59 Identities = 113/118 (95%), Positives = 117/118 (99%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHALFY VFML+ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 359 NPFHALFYFVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 418
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF Sbjct: 419 IPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 476
>tr|Q6ES90|Q6ES90_ORYSJ Putative Sec61 OS=Oryza sativa subsp. japonica GN=P0512H04.19 PE=3 SV=1 Length = 337
Score = 230 bits (586), Expect = 3e-59 Identities = 112/118 (94%), Positives = 118/118 (100%) Frame = -2
Query: 492 NPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRY 313 NPFHALFY+VFML+ACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGHRESNLQKELNRY Sbjct: 220 NPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRY 279
Query: 312 IPTAAAFGGMCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 139 IPTAAAFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETFEKERA+ELGFFGF Sbjct: 280 IPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF 337
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