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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917656
Clone id YMU001_000103_G10
Library
Length 334
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATAGTTGAGGGCATGGAATGCTCACCTTCACTTCACAAAACAGTTGCTTCTCCCATACAC
AAAGCCTTTCAAGAGCGAGGGCATGACTGCCCATAACCTAAGACCCCCCTAGAATACAGA
AGTTGTCATCAAGGGAGCCATGAGGGCTTTTGCTCCAGTTCCATTCCACGGGCTGAGTAT
GCTCCACTATTTGCAACTGCAAATTCAAGACAAACACAACTGTAATTAGCCAAAATGAAA
TTAGTGCATACAATAGATGCACGTTACTTTTACATGGTATCCGGATAGGATCAATGGAGG
ATCTTGGTGCTCCACGACTGGCTTTAACCTTCTT
■■Homology search results ■■ -
sp_hit_id Q8TE56
Definition sp|Q8TE56|ATS17_HUMAN A disintegrin and metalloproteinase with thrombospondin motifs 17 OS=Homo sapiens
Align length 38
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917656|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_G10.
         (334 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TE56|ATS17_HUMAN A disintegrin and metalloproteinase with t...    32   1.3  
sp|Q9XZU1|XPO2_DROME Exportin-2 OS=Drosophila melanogaster GN=Ca...    29   8.4  

>sp|Q8TE56|ATS17_HUMAN A disintegrin and metalloproteinase with
            thrombospondin motifs 17 OS=Homo sapiens GN=ADAMTS17 PE=2
            SV=1
          Length = 1095

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 19   CSPSLHKTVASPIHKAFQERGHDCP*PKTPLEYRSCHQ 132
            C   L   V   +HK     G +CP    P  YR C+Q
Sbjct: 988  CGKGLQSRVVQCMHKVTGRHGSECPALSKPAPYRQCYQ 1025


>sp|Q9XZU1|XPO2_DROME Exportin-2 OS=Drosophila melanogaster GN=Cas
           PE=1 SV=2
          Length = 975

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +2

Query: 32  FTKQLLLPYTKPFKSEGMTAHNLRPP*NTEVVIKGAMRAF-----APVPFHGLSMLHYLQ 196
           F  Q+L PYT    S      +L      E V+K  MR+F     A +PF G+++    +
Sbjct: 544 FGPQILAPYTTELISGLFATLSLPGSGENEYVMKAIMRSFSVLQSAAMPFMGVALPRLTE 603

Query: 197 LQIQDKHNCN*PK*N 241
           +  Q   N + P+ N
Sbjct: 604 ILTQVAKNPSRPQFN 618
tr_hit_id A7PG46
Definition tr|A7PG46|A7PG46_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera
Align length 39
Score (bit) 38.1
E-value 0.22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917656|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_G10.
         (334 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PG46|A7PG46_VITVI Chromosome chr6 scaffold_15, whole genome...    38   0.22 
tr|A5ASK1|A5ASK1_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|B8A2W2|B8A2W2_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.29 
tr|Q9SD19|Q9SD19_ARATH Putative uncharacterized protein F24M12.3...    37   0.38 
tr|Q0GPD1|Q0GPD1_SOYBN BZIP transcription factor bZIP114 (Fragme...    36   0.85 
tr|Q9ZVD1|Q9ZVD1_ARATH Putative uncharacterized protein At2g2709...    35   2.5  
tr|Q69JE4|Q69JE4_ORYSJ Putative uncharacterized protein P0229B10...    35   2.5  
tr|Q0J002|Q0J002_ORYSJ Os09g0538700 protein OS=Oryza sativa subs...    35   2.5  
tr|B8LQT1|B8LQT1_PICSI Putative uncharacterized protein OS=Picea...    35   2.5  
tr|A7R5F9|A7R5F9_VITVI Chromosome undetermined scaffold_957, who...    35   2.5  
tr|Q5XV54|Q5XV54_ARATH Putative uncharacterized protein OS=Arabi...    34   4.2  
tr|O65666|O65666_ARATH Putative uncharacterized protein AT4g3979...    34   4.2  
tr|O64472|O64472_ARATH Putative uncharacterized protein At2g1909...    34   4.2  
tr|Q0V6D7|Q0V6D7_PHANO Putative uncharacterized protein OS=Phaeo...    34   4.2  
tr|Q8H241|Q8H241_GOSHI Putative uncharacterized protein OS=Gossy...    33   5.5  
tr|A5BNV3|A5BNV3_VITVI Putative uncharacterized protein OS=Vitis...    33   5.5  
tr|Q10M67|Q10M67_ORYSJ Os03g0321500 protein OS=Oryza sativa subs...    33   7.2  
tr|A5AK20|A5AK20_VITVI Putative uncharacterized protein OS=Vitis...    33   7.2  
tr|B4QMM2|B4QMM2_DROSI GD12956 OS=Drosophila simulans GN=GD12956...    33   7.2  
tr|B4HK43|B4HK43_DROSE GM24909 OS=Drosophila sechellia GN=GM2490...    33   7.2  
tr|A0DYG0|A0DYG0_PARTE Chromosome undetermined scaffold_7, whole...    33   7.2  
tr|B3M5X7|B3M5X7_DROAN GF10142 OS=Drosophila ananassae GN=GF1014...    33   9.4  

>tr|A7PG46|A7PG46_VITVI Chromosome chr6 scaffold_15, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017371001
           PE=4 SV=1
          Length = 765

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = -1

Query: 136 SLDDNFCILGGS*VMGSHALALERLCVWEKQLFCEVKVS 20
           +L DNFC+  GS     HA  L+RL  WE++L+ EVK S
Sbjct: 434 NLFDNFCMTSGS-----HASTLDRLFAWERKLYDEVKAS 467


>tr|A5ASK1|A5ASK1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_005354 PE=4 SV=1
          Length = 471

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -1

Query: 136 SLDDNFCILGGS*VMGSHALALERLCVWEKQLFCEVKV 23
           +L DNFC+  GS     HA  L+RL  WE++L+ EVKV
Sbjct: 434 NLFDNFCMTSGS-----HASTLDRLFAWERKLYDEVKV 466


>tr|B8A2W2|B8A2W2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 573

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
 Frame = -1

Query: 175 QPVEWNWSKSPHGSLDDNFCILG-----------GS*VMGSHALALERLCVWEKQLFCEV 29
           +P+ W W    +G  +D F   G           G   M SH+  +E+L  WEK+LF EV
Sbjct: 187 KPMGWAWGGGGYGKGNDGFTRFGRGDGGMPMGNGGGGGMLSHSSTVEKLYAWEKKLFLEV 246

Query: 28  K 26
           K
Sbjct: 247 K 247


>tr|Q9SD19|Q9SD19_ARATH Putative uncharacterized protein F24M12.330
           OS=Arabidopsis thaliana GN=F24M12.330 PE=4 SV=1
          Length = 602

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 14/30 (46%), Positives = 24/30 (80%)
 Frame = -1

Query: 115 ILGGS*VMGSHALALERLCVWEKQLFCEVK 26
           ++GG+ ++GSH+  ++RL  WEK+L+ EVK
Sbjct: 279 VIGGNCIVGSHSSTVDRLYAWEKKLYQEVK 308


>tr|Q0GPD1|Q0GPD1_SOYBN BZIP transcription factor bZIP114 (Fragment)
           OS=Glycine max GN=bZIP114 PE=2 SV=1
          Length = 520

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1

Query: 136 SLDDNFCILGGS*VMGSHALALERLCVWEKQLFCEVKVS 20
           +L DN C++ GS     HA  L+RL  WE++L+ EVK S
Sbjct: 420 NLFDNSCMISGS-----HASTLDRLYAWERKLYDEVKAS 453


>tr|Q9ZVD1|Q9ZVD1_ARATH Putative uncharacterized protein At2g27090
           (At2g27090) OS=Arabidopsis thaliana GN=At2g27090 PE=1
           SV=1
          Length = 743

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -1

Query: 142 HGSLDDNFCILGGS*VMGSHALALERLCVWEKQLFCEVKVS 20
           + +L +N C++ GS     HA  L+RL  WE++L+ EVK S
Sbjct: 412 NSNLFENICMIAGS-----HASTLDRLYAWERKLYDEVKGS 447


>tr|Q69JE4|Q69JE4_ORYSJ Putative uncharacterized protein P0229B10.32
           (Putative uncharacterized protein B1274F11.1) OS=Oryza
           sativa subsp. japonica GN=P0229B10.32 PE=4 SV=1
          Length = 153

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -1

Query: 109 GGS*VMGSHALALERLCVWEKQLFCEVKVSI 17
           GGS  + SH+  +E+L  WEK+LF EVK S+
Sbjct: 4   GGSSGILSHSSTVEKLYAWEKKLFLEVKCSV 34


>tr|Q0J002|Q0J002_ORYSJ Os09g0538700 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0538700 PE=4 SV=1
          Length = 727

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = -1

Query: 109 GGS*VMGSHALALERLCVWEKQLFCEVKVSI 17
           GGS  + SH+  +E+L  WEK+LF EVK S+
Sbjct: 322 GGSSGILSHSSTVEKLYAWEKKLFLEVKCSV 352


>tr|B8LQT1|B8LQT1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 724

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 169 VEWNWS-KSPHGSLDDNFCILGGS*VMGSHALALERLCVWEKQLFCEVK 26
           + WN S K PHG  D N  + G      +HA  L++L  WE +L+ EVK
Sbjct: 325 ITWNRSFKGPHGLEDGNDDMQGKE--KETHASVLDKLLAWENKLYDEVK 371


>tr|A7R5F9|A7R5F9_VITVI Chromosome undetermined scaffold_957, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00005193001 PE=4 SV=1
          Length = 453

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -1

Query: 127 DNFCILGGS*VMGSHALALERLCVWEKQLFCEVKVS 20
           + FC++ GS     H+  LERL  WE++L+ EVK S
Sbjct: 150 EEFCMIAGS-----HSSTLERLYAWERKLYDEVKAS 180