BP917661
Clone id YMU001_000103_H06
Library
Length 355
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000103_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTCATCTCCATGGGCAGTCCTCTTTTGAGTAGCTCAAAAGATGTACTCAATGAGGAAC
ACTATATTCAACAACCACGGCCCAAAAAGTGAAGCCACGGTTGTTGAGAACAAGCAGAGT
ATGGAAGCAAATTACTAGTGCGTAGTTGATCGAATCCAAAATTGAGGTAATTGCACAAAA
GGACCATGTATGCAGAGCTTAATGTTCTAAGGAGTACTAGCTAAAGCTACTCAATCAGCT
CTAGAGAAGTGCAGCTACAATGAACGAATGCATGGACTTGGTTGGCGTGTACAAAAACAA
GGGTCGTCATTGCATTGCTGATGAAGTCTCATGATGAATATGTGCAAAGTAAATG
■■Homology search results ■■ -
sp_hit_id Q750P7
Definition sp|Q750P7|SPC19_ASHGO DASH complex subunit SPC19 OS=Ashbya gossypii
Align length 67
Score (bit) 32.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917661|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_H06.
(355 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q750P7|SPC19_ASHGO DASH complex subunit SPC19 OS=Ashbya gossy... 32 1.0
sp|Q89A85|SECY_BUCBP Preprotein translocase subunit secY OS=Buch... 30 4.8

>sp|Q750P7|SPC19_ASHGO DASH complex subunit SPC19 OS=Ashbya gossypii
GN=SPC19 PE=3 SV=1
Length = 148

Score = 32.0 bits (71), Expect = 1.0
Identities = 20/67 (29%), Positives = 39/67 (58%)
Frame = +2

Query: 80 AQKVKPRLLRTSRVWKQITSA*LIESKIEVIAQKDHVCRA*CSKEY*LKLLNQL*RSAAT 259
++++ LLR+ RV++ ++ L ++++VI + + V CSK K LN+L R AT
Sbjct: 33 SRRLTSTLLRSKRVFELVSEYDLQRARLDVIEEVEPVVEKLCSKLE--KSLNKLERERAT 90

Query: 260 MNECMDL 280
+ + +L
Sbjct: 91 LQQTYEL 97


>sp|Q89A85|SECY_BUCBP Preprotein translocase subunit secY
OS=Buchnera aphidicola subsp. Baizongia pistaciae
GN=secY PE=3 SV=1
Length = 441

Score = 29.6 bits (65), Expect = 4.8
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Frame = -3

Query: 131 FASILCLFSTTVASLFG-----PWLLNIVFLIE 48
FAS + LF T+AS FG WL++IVF ++
Sbjct: 280 FASSIVLFPATIASWFGNRDHFKWLVDIVFYLQ 312


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917661|Adiantum capillus-veneris mRNA, clone:
YMU001_000103_H06.
(355 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******