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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917672
Clone id YMU001_000104_A08
Library
Length 430
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GAGAGAGAGAGAGATGTATTTACGTGAACAGTCTCTCACTAACATAGATAAATTTCGTTT
AACTTTCTTGAAGCAGTATCAAGATTGTTTGCATAGATTCTCTTCCCGATGAATTGCCCG
GAGAACGTCCAGAAGATCATAGAATTGATATTATCCCAAGAAACTCTCCTCCAAATCCTA
ACACAGCAACAAGAAGAGATTATGAAAGCAAGTAAACGAGCTTTTGGAGAAGGGCTTGAT
TCTCTCCATATTCTTCACCAGTTTCACTTGTTCAGAAGAAAGACGACACTTTTTGAATGT
GCATAGATTACAAATCTCTCACTAAGATTACTATCGAGGAATCGATTTCCAATACCACGA
ATTGATGACATTCTTGACAAGTTACAGGGTGCACGTATTTCAGCCGCATAGACCTTATGA
AACCGGCCTG
■■Homology search results ■■ -
sp_hit_id Q99315
Definition sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae
Align length 33
Score (bit) 44.7
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917672|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_A08.
         (430 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    45   2e-06
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    45   2e-06
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...    37   0.044
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra...    35   0.17 
sp|P42158|KC1D_ARATH Casein kinase I isoform delta-like OS=Arabi...    33   0.63 
sp|Q922H7|RSLBB_MOUSE Ras-like protein family member 11B OS=Mus ...    31   1.8  
sp|Q89928|POL_HV2EH Gag-Pol polyprotein OS=Human immunodeficienc...    30   3.1  
sp|Q2JMD7|IF2_SYNJB Translation initiation factor IF-2 OS=Synech...    30   3.1  
sp|Q02836|POL_SIVG1 Gag-Pol polyprotein OS=Simian immunodeficien...    30   5.3  
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra...    30   5.3  
sp|Q74120|POL_HV2KR Gag-Pol polyprotein OS=Human immunodeficienc...    29   7.0  
sp|P19028|POL_FIVSD Pol polyprotein OS=Feline immunodeficiency v...    29   7.0  
sp|P16088|POL_FIVPE Pol polyprotein OS=Feline immunodeficiency v...    29   7.0  
sp|P92522|M850_ARATH Uncharacterized mitochondrial protein AtMg0...    29   7.0  
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...    29   7.1  
sp|Q9BPW5|RSLBB_HUMAN Ras-like protein family member 11B OS=Homo...    29   9.1  

>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
           OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 243 SPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEE 341
           SP SSPV LV KKD TF +C+DY++L K TI +
Sbjct: 630 SPCSSPVVLVPKKDGTFRLCVDYRTLNKATISD 662



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1

Query: 346 FPIPRIDDILDKLQGARI 399
           FP+PRID++L ++  A+I
Sbjct: 664 FPLPRIDNLLSRIGNAQI 681


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
           OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +3

Query: 243 SPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEE 341
           SP SSPV LV KKD TF +C+DY++L K TI +
Sbjct: 656 SPCSSPVVLVPKKDGTFRLCVDYRTLNKATISD 688



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1

Query: 346 FPIPRIDDILDKLQGARI 399
           FP+PRID++L ++  A+I
Sbjct: 690 FPLPRIDNLLSRIGNAQI 707


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score = 36.6 bits (83), Expect = 0.044
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
 Frame = +3

Query: 243 SPYSSPVSLVQKKDDT-----F*MCIDYKSLTKITI--EESISNTTN**HS*QVTG---- 389
           SPY+SP+ +V KK D      F + IDY+ L +IT+     I N        ++ G    
Sbjct: 241 SPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMD------EILGKLGR 294

Query: 390 CTYFSRIDLMK 422
           C YF+ IDL K
Sbjct: 295 CNYFTTIDLAK 305


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
           transposon 297 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1059

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +3

Query: 243 SPYSSPVSLVQKKDDT-----F*MCIDYKSLTKITIEESISNTTN**HS*QVTGCTYFSR 407
           SPY+SP  +V KK D      + + IDY+ L +ITI +            ++  C YF+ 
Sbjct: 240 SPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTT 299

Query: 408 IDLMK 422
           IDL K
Sbjct: 300 IDLAK 304


>sp|P42158|KC1D_ARATH Casein kinase I isoform delta-like
           OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2
          Length = 450

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
 Frame = +3

Query: 72  SSIKIVCIDSLPDELPGE-------RPEDHRIDIIPRNSPPNPNTATRRDYES 209
           SS ++  +    D  PG        R  D    +IPRNSP     +TRR YES
Sbjct: 381 SSRRVTAVSGSRDNFPGSEELLQRSRTGDVSRGVIPRNSPGEAGKSTRRHYES 433


>sp|Q922H7|RSLBB_MOUSE Ras-like protein family member 11B OS=Mus
           musculus GN=Rasl11b PE=2 SV=1
          Length = 247

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 72  SSIKIVCIDSLPDELPGERPEDHRIDIIPRNSPPNPNTATRR 197
           ++  ++C +  P + P   PE  R  +IPR   PN     RR
Sbjct: 191 NAFHVLCKEVSPKQQPSSTPEKRRTSLIPRPKSPNMQDLKRR 232


>sp|Q89928|POL_HV2EH Gag-Pol polyprotein OS=Human immunodeficiency
           virus type 2 (isolate EHO subtype B) GN=gag-pol PE=3
           SV=3
          Length = 1464

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 243 SPYSSPVSLVQKKD-DTF*MCIDYKSLTKITIE 338
           +PY+SP   ++KKD + + M ID++ L K+T E
Sbjct: 663 NPYNSPTFAIKKKDKNKWRMLIDFRELNKVTQE 695


>sp|Q2JMD7|IF2_SYNJB Translation initiation factor IF-2
           OS=Synechococcus sp. GN=infB PE=3 SV=1
          Length = 1054

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 102 LPDELPGERPEDHRIDIIPRNSPPNPNTATRRDYESK*TSFWRRA 236
           LP+ +PGERP    ++   R +PP     T  + + +  +  RRA
Sbjct: 322 LPERIPGERPSPVLVEAPVRPTPPKVKRKTEEEEDDELQALSRRA 366


>sp|Q02836|POL_SIVG1 Gag-Pol polyprotein OS=Simian immunodeficiency
           virus agm.grivet (isolate AGM gr-1) GN=gag-pol PE=3 SV=2
          Length = 1472

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +3

Query: 243 SPYSSPVSLVQKKDDT-F*MCIDYKSLTKIT 332
           +PY++PV  ++KKD T + M +D++ L K T
Sbjct: 663 NPYNTPVFAIKKKDKTQWRMLVDFRELNKAT 693


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
           transposon opus OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1003

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
 Frame = +3

Query: 243 SPYSSPVSLVQKK-----DDTF*MCIDYKSLTKITIEES 344
           SPY+SP+ +V KK     +  + M +D+K L  +TI ++
Sbjct: 157 SPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDT 195
tr_hit_id Q6VPE8
Definition tr|Q6VPE8|Q6VPE8_PETHY Putative gag-pol polyprotein OS=Petunia hybrida
Align length 90
Score (bit) 51.6
E-value 8.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917672|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_A08.
         (430 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6VPE8|Q6VPE8_PETHY Putative gag-pol polyprotein OS=Petunia h...    52   8e-09
tr|Q2QR29|Q2QR29_ORYSJ Retrotransposon protein, putative, Ty3-gy...    53   3e-08
tr|Q7XXH8|Q7XXH8_ORYSJ OSJNBa0059H15.11 protein OS=Oryza sativa ...    53   3e-08
tr|Q8LLX8|Q8LLX8_ORYSJ Putative retroelement (Retrotransposon pr...    60   5e-08
tr|Q25AC4|Q25AC4_ORYSA H0522A01.6 protein (H0425E08.11 protein) ...    60   5e-08
tr|Q2R1L3|Q2R1L3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    48   6e-08
tr|Q2R2D1|Q2R2D1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    50   6e-08
tr|Q9AYB5|Q9AYB5_ORYSA Similar to Transposon MAGGYgagandpolgeneh...    60   7e-08
tr|Q338U3|Q338U3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    60   7e-08
tr|Q8W5E8|Q8W5E8_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    59   1e-07
tr|Q7G654|Q7G654_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   1e-07
tr|Q7FA96|Q7FA96_ORYSJ OSJNBa0011E07.12 protein OS=Oryza sativa ...    59   1e-07
tr|Q6F2X5|Q6F2X5_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   1e-07
tr|Q6ATE9|Q6ATE9_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   1e-07
tr|Q65WS7|Q65WS7_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   1e-07
tr|Q60DZ3|Q60DZ3_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   1e-07
tr|Q60DI3|Q60DI3_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   1e-07
tr|Q53JJ6|Q53JJ6_ORYSJ Retrotransposon protein, putative, Ty3-gy...    59   1e-07
tr|Q258Z7|Q258Z7_ORYSA H0624F09.1 protein (H0818H01.18 protein) ...    59   1e-07
tr|Q10LC3|Q10LC3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    59   1e-07
tr|Q10LB2|Q10LB2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    59   1e-07
tr|Q109V2|Q109V2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    59   1e-07
tr|Q2R8S5|Q2R8S5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    53   1e-07
tr|A5AN84|A5AN84_VITVI Putative uncharacterized protein OS=Vitis...    53   1e-07
tr|Q9AYC0|Q9AYC0_ORYSA Polyprotein OS=Oryza sativa GN=OSJNBa0094...    59   2e-07
tr|Q94H22|Q94H22_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    59   2e-07
tr|Q8SB03|Q8SB03_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    59   2e-07
tr|Q8S760|Q8S760_ORYSA Putative retroelement OS=Oryza sativa GN=...    59   2e-07
tr|Q8S644|Q8S644_ORYSJ Putative polyprotein OS=Oryza sativa subs...    59   2e-07
tr|Q8LMV8|Q8LMV8_ORYSJ Putative polyprotein (Retrotransposon pro...    59   2e-07

>tr|Q6VPE8|Q6VPE8_PETHY Putative gag-pol polyprotein OS=Petunia
           hybrida PE=4 SV=1
          Length = 803

 Score = 51.6 bits (122), Expect(2) = 8e-09
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
 Frame = +3

Query: 96  DSLPDELPGERPEDHRIDIIPRNSPPNP-----NTATRRDYESK*TSFWR----RA*FSP 248
           D +PD LP  R  +H+ID IP +  PN      N    R+ + +          R   SP
Sbjct: 691 DEMPDGLPPLRGIEHQIDFIPGSQIPNKPAYRSNPEDTRELQKQVDDLLSKGLVRESLSP 750

Query: 249 YSSPVSLVQKKDDTF*MCIDYKSLTKITIE 338
            + PV LV KKD T+ MC+D +++ KITI+
Sbjct: 751 CAVPVILVPKKDGTWRMCVDCRAVNKITIK 780



 Score = 31.2 bits (69), Expect(2) = 8e-09
 Identities = 11/18 (61%), Positives = 17/18 (94%)
 Frame = +1

Query: 349 PIPRIDDILDKLQGARIS 402
           PIPR+DD+LD+L G+R++
Sbjct: 784 PIPRLDDMLDELSGSRVT 801


>tr|Q2QR29|Q2QR29_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g29000 PE=4 SV=1
          Length = 1375

 Score = 53.1 bits (126), Expect(2) = 3e-08
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
 Frame = +3

Query: 96  DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
           D  PD+LPG  P+   + RID++P  +P          N     +R  +      + R  
Sbjct: 423 DVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPS 482

Query: 240 FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIE 338
            SP+ +PV  V+KKD T  MC+DY++L  +TI+
Sbjct: 483 SSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIK 515



 Score = 27.7 bits (60), Expect(2) = 3e-08
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +1

Query: 346 FPIPRIDDILDKLQG 390
           +P+PRIDD+ D+L+G
Sbjct: 518 YPLPRIDDLFDQLKG 532


>tr|Q7XXH8|Q7XXH8_ORYSJ OSJNBa0059H15.11 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBa0059H15.11 PE=4 SV=2
          Length = 585

 Score = 53.1 bits (126), Expect(2) = 3e-08
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 12/93 (12%)
 Frame = +3

Query: 96  DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
           D  PD+LPG  P+   + RID++P  +P          N     +R  +      + R  
Sbjct: 467 DVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPS 526

Query: 240 FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIE 338
            SP+ +PV  V+KKD T  MC+DY++L  +TI+
Sbjct: 527 SSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIK 559



 Score = 27.7 bits (60), Expect(2) = 3e-08
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +1

Query: 346 FPIPRIDDILDKLQG 390
           +P+PRIDD+ D+L+G
Sbjct: 562 YPLPRIDDLFDQLKG 576


>tr|Q8LLX8|Q8LLX8_ORYSJ Putative retroelement (Retrotransposon
            protein, putative, Ty3-gypsy subclass) OS=Oryza sativa
            subsp. japonica GN=OSJNAa0053D03.10 PE=4 SV=1
          Length = 1825

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
 Frame = +3

Query: 96   DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
            D  P+ELPG  P+   + RID+ P  +P          N  T  ++  E      + R+ 
Sbjct: 861  DVFPEELPGMPPKREIEFRIDLAPGTTPLHKRPYRMAANELTEVKKQLEELKEKGYIRSS 920

Query: 240  FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEESISNTTN**HS*QVTGCTYFSRIDL 416
             SP+ +PV  V+KKD T  MC+DY++L ++TI+             Q+ G T FS+IDL
Sbjct: 921  TSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDL 979


>tr|Q25AC4|Q25AC4_ORYSA H0522A01.6 protein (H0425E08.11 protein)
           OS=Oryza sativa GN=H0522A01.6 PE=4 SV=1
          Length = 1475

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
 Frame = +3

Query: 96  DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
           D LPD+LPG  P+   + RID++P  +P          N     +R  +      + R  
Sbjct: 511 DVLPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPS 570

Query: 240 FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEESISNTTN**HS*QVTGCTYFSRIDL 416
            SP+ +PV  V+KKD T  MC+DY++L  +TI+             Q+ G T FS+IDL
Sbjct: 571 SSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDL 629


>tr|Q2R1L3|Q2R1L3_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g38820 PE=4 SV=1
          Length = 1710

 Score = 48.1 bits (113), Expect(2) = 6e-08
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
 Frame = +3

Query: 96   DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
            D  P++LPG  P+   +  ID+IP  +P          N     +R         + R  
Sbjct: 893  DVFPEDLPGMPPDRDVEFIIDLIPGTAPISKRPYRMPVNELEELKRQIRELQEKGFVRPS 952

Query: 240  FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIE 338
             SP+ +PV  V+KKD +  MC+DY+SL ++TI+
Sbjct: 953  SSPWGAPVLFVKKKDGSMRMCVDYRSLNEVTIK 985



 Score = 31.6 bits (70), Expect(2) = 6e-08
 Identities = 11/18 (61%), Positives = 17/18 (94%)
 Frame = +1

Query: 346  FPIPRIDDILDKLQGARI 399
            +P+PRIDD+ D+L+GA+I
Sbjct: 988  YPLPRIDDLFDQLKGAKI 1005


>tr|Q2R2D1|Q2R2D1_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g36220 PE=4 SV=1
          Length = 1668

 Score = 50.1 bits (118), Expect(2) = 6e-08
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
 Frame = +3

Query: 96   DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
            D  P+ELPG  P+   + RID+ P  +P          N     ++  E      + R  
Sbjct: 805  DVFPEELPGMPPKREIEFRIDLAPGTTPLYKRHYRMAANELVEVKKQLEELKEKGYIRPS 864

Query: 240  FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIE 338
             SP+ +PV  V+ KD T  MC+DY++L ++TI+
Sbjct: 865  TSPWGAPVIFVENKDKTKRMCVDYRALNEVTIK 897



 Score = 29.6 bits (65), Expect(2) = 6e-08
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = +1

Query: 346 FPIPRIDDILDKLQGARI 399
           +P+PRIDD+ D+L+GA +
Sbjct: 900 YPLPRIDDLFDQLKGAAL 917


>tr|Q9AYB5|Q9AYB5_ORYSA Similar to Transposon
            MAGGYgagandpolgenehomologues OS=Oryza sativa
            GN=OSJNBa0094H10.20 PE=4 SV=1
          Length = 2157

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
 Frame = +3

Query: 96   DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
            D  PD+LPG  P+   + RID++P  +P          N     +R  +      + R  
Sbjct: 973  DVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPS 1032

Query: 240  FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEES-----ISNTTN**HS*QVTGCTYFS 404
             SP+ +PV  V+KKD T  MC+DY++L  +TI+       I +  N     Q+ G T FS
Sbjct: 1033 SSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFN-----QLKGATVFS 1087

Query: 405  RIDL 416
            +IDL
Sbjct: 1088 KIDL 1091


>tr|Q338U3|Q338U3_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os10g24540 PE=4 SV=2
          Length = 1326

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
 Frame = +3

Query: 96  DSLPDELPGERPE---DHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA* 239
           D  PD+LPG  P+   + RID++P  +P          N     +R  +      + R  
Sbjct: 509 DVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPS 568

Query: 240 FSPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEES-----ISNTTN**HS*QVTGCTYFS 404
            SP+ +PV  V+KKD T  MC+DY++L  +TI+       I +  N     Q+ G T FS
Sbjct: 569 SSPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFN-----QLKGATVFS 623

Query: 405 RIDL 416
           +IDL
Sbjct: 624 KIDL 627


>tr|Q8W5E8|Q8W5E8_ORYSA Putative polyprotein OS=Oryza sativa
           GN=OSJNBb0008A05.16 PE=4 SV=1
          Length = 1416

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 11/118 (9%)
 Frame = +3

Query: 96  DSLPDELPGERP--EDHRIDIIPRNSP---------PNPNTATRRDYESK*TSFWRRA*F 242
           D  PD+LPG  P  ++ RID++P  +P          N     +R  +      + R   
Sbjct: 477 DVFPDDLPGMPPKRDEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSS 536

Query: 243 SPYSSPVSLVQKKDDTF*MCIDYKSLTKITIEESISNTTN**HS*QVTGCTYFSRIDL 416
           SP+ +PV  V+KKD T  MC+DY++L  +TI+             Q+ G T FS+IDL
Sbjct: 537 SPWGAPVIFVEKKDHTQRMCVDYRALNDVTIKNKYLLPRIDDLFDQLKGATVFSKIDL 594