BP917673
Clone id YMU001_000104_A09
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGTGAACATGGCACATGCATGCACATCTAGTCTGCATACTCATGTGCACAATCTGTTGCG
TGCATGAGATGCATGCCAACAAGTCCCAAAACTAGCAGCCTTCTTCTCTCTTTTCCAGGC
TTCCTTATTTAACGACTTACATTTGGTTGTGGATAGCATACCTACAGTTAGCATGGCTGC
TCTTACCGCGTTCTTCAGTCTCCACCACGGCTGCTCTGAAGCATGAATCAAAGTCTGAGA
AGGTAGAGAATCTCAAGAGTTCATCTTTTGTCCCTAGGCTCCCAGCATCTAGAGTTTCTT
GTGCTGCAAATGCCACTGTGAACAATGGTGCTCTCGGGGCTAGGGCGGTGATCACGCCAT
CCTTGGGCTCGGAAAAGCCCAACCGGACTCGAGCTGCAACCAAGGATCCCTCCTCCCCTG
AGTTTCTTCCCATCCCTTCTTTTGAGGAGTGCTTTCCAAACAGCACCAAAGAAAGCAGGG
AAATTGTGCATGAACCTACAGGTTC
■■Homology search results ■■ -
sp_hit_id Q5NVK0
Definition sp|Q5NVK0|CA114_PONAB Uncharacterized protein C1orf114 homolog OS=Pongo abelii
Align length 59
Score (bit) 35.0
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917673|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_A09.
(505 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5NVK0|CA114_PONAB Uncharacterized protein C1orf114 homolog O... 35 0.20
sp|Q18892|U493_CAEEL UPF0493 protein C56C10.12 OS=Caenorhabditis... 32 1.7
sp|A3KN19|FA83D_BOVIN Protein FAM83D OS=Bos taurus GN=FAM83D PE=... 32 1.7
sp|A8MG11|GLPK_ALKOO Glycerol kinase OS=Alkaliphilus oremlandii ... 32 1.7
sp|A2AQ25|SKT_MOUSE Sickle tail protein OS=Mus musculus GN=Skt P... 32 2.2
sp|Q5T5P2|SKT_HUMAN Sickle tail protein homolog OS=Homo sapiens ... 31 2.9
sp|Q62407|SPEG_MOUSE Striated muscle-specific serine/threonine-p... 31 3.7
sp|Q696W0|SPEG_DANRE Striated muscle preferentially expressed pr... 31 3.7
sp|Q5XFW8|SEC13_RAT Protein SEC13 homolog OS=Rattus norvegicus G... 31 3.7
sp|Q9D1M0|SEC13_MOUSE Protein SEC13 homolog OS=Mus musculus GN=S... 31 3.7
sp|Q5TID7|CA114_HUMAN Uncharacterized protein C1orf114 OS=Homo s... 31 3.7
sp|P75556|Y213_MYCPN Uncharacterized protein MG075 homolog OS=My... 30 4.9
sp|P02845|VIT2_CHICK Vitellogenin-2 OS=Gallus gallus GN=VTG2 PE=... 30 4.9
sp|Q63638|SPEG_RAT Striated muscle-specific serine/threonine-pro... 30 4.9
sp|Q66H29|GP160_RAT Probable G-protein coupled receptor 160 OS=R... 30 4.9
sp|P40468|TAO3_YEAST Cell morphogenesis protein PAG1 OS=Saccharo... 30 6.4
sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Dros... 30 6.4
sp|A8MVM7|YD021_HUMAN Putative uncharacterized protein ENSP00000... 30 6.5
sp|Q3ZCC9|SEC13_BOVIN Protein SEC13 homolog OS=Bos taurus GN=SEC... 30 8.3
sp|Q8GUH1|PUB33_ARATH U-box domain-containing protein 33 OS=Arab... 30 8.3
sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isom... 30 8.3

>sp|Q5NVK0|CA114_PONAB Uncharacterized protein C1orf114 homolog
OS=Pongo abelii PE=2 SV=1
Length = 509

Score = 35.0 bits (79), Expect = 0.20
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Frame = +3

Query: 180 LLPRSSVSTTAALKHESKSEKVENLKSSS------FVPRLPASRVSCAANATVNNGALG 338
LLPRSS S+ + K E + K+ + SS ++P+ P +R +C ++A +++ + G
Sbjct: 255 LLPRSSNSSVSGTKKEDSAAKIHAVTHSSTGKPLAYIPQPPLNRKTCPSSAVISDQSKG 313


>sp|Q18892|U493_CAEEL UPF0493 protein C56C10.12 OS=Caenorhabditis
elegans GN=C56C10.12 PE=2 SV=1
Length = 1599

Score = 32.0 bits (71), Expect = 1.7
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Frame = +3

Query: 204 TTAALKHESKSEKVENLKSSSFVPRLPASRVSCAANATVNNGALGARAVITP-------- 359
T +LK E SE +++++SS P P RVS A + R++I P
Sbjct: 64 TEDSLKREEASEPLKDVRSSPVRPAPPPPRVSQEREAP----PIPPRSMIFPRSTSMVAE 119

Query: 360 ----SLGSEKPNRTRAATKDPSSPEFLPIPSFEE 449
S + P R+ A P+ PE +PS+ +
Sbjct: 120 SRKESTTAVAPKRSVAVASYPAVPELAELPSYTD 153


>sp|A3KN19|FA83D_BOVIN Protein FAM83D OS=Bos taurus GN=FAM83D PE=2
SV=1
Length = 581

Score = 32.0 bits (71), Expect = 1.7
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3

Query: 198 VSTTAALKHESKSEKVENLKSSSFVPRLPASRVSCAANATV-NNGALGARAVITPSLGSE 374
V TT+A E V S P S++S + ++++ ++ +L ++ + S+GS+
Sbjct: 429 VPTTSATTQTDVDEGVLASPGSQSKEGSPVSKMSVSRSSSLRSSSSLSSQGSVASSIGSQ 488

Query: 375 KPNR-TRAATKDPSSPEFLPIPSFEECFPNSTK 470
R T AT P P++ P F+ CF +S +
Sbjct: 489 TSFRSTDFAT--PGPPKYQSTPHFDLCFRDSLR 519


>sp|A8MG11|GLPK_ALKOO Glycerol kinase OS=Alkaliphilus oremlandii
(strain OhILAs) GN=glpK PE=3 SV=1
Length = 504

Score = 32.0 bits (71), Expect = 1.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1

Query: 463 LFGKHSSKEGMGRNSGEEGSLVAARVRLGFSEPKDGVITALA 338
LFG+ KEGMG+N+ G + F + K+G++T LA
Sbjct: 249 LFGQGCFKEGMGKNTYGTGCFMLMNTGDQFVQSKNGLLTTLA 290


>sp|A2AQ25|SKT_MOUSE Sickle tail protein OS=Mus musculus GN=Skt PE=1
SV=1
Length = 1946

Score = 31.6 bits (70), Expect = 2.2
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3

Query: 258 SSSFVPRLPASRVSCAANATVNNGALGARAVITPSLGSEKPNRTRAATKDPSS 416
SSS P PAS S +N GA G R + TPSL S K ++ PS+
Sbjct: 1895 SSSSSPPSPASPTS------LNQGARGIRTIHTPSLASYKAQNGSSSKATPST 1941


>sp|Q5T5P2|SKT_HUMAN Sickle tail protein homolog OS=Homo sapiens
GN=SKT PE=1 SV=2
Length = 1943

Score = 31.2 bits (69), Expect = 2.9
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +3

Query: 195 SVSTTAALKHESKSEKVENLK-----SSSFVPRLPASRVSCAANATVNNGALGARAVITP 359
S++ T H S S + +N + S S P PAS VS +N GA G R + TP
Sbjct: 1866 SLTHTGKGHHLSFSPQSQNGRAPPPLSFSSSPPSPASSVS------LNQGAKGTRTIHTP 1919

Query: 360 SLGSEKPNRTRAATKDPSS 416
SL S K ++ PS+
Sbjct: 1920 SLTSYKAQNGSSSKATPST 1938


>sp|Q62407|SPEG_MOUSE Striated muscle-specific
serine/threonine-protein kinase OS=Mus musculus GN=Speg
PE=1 SV=2
Length = 3262

Score = 30.8 bits (68), Expect = 3.7
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = +3

Query: 174 WLLLPRSSV-STTAALKHESKSEKVENLKS--SSFVPRLPASRVSCAANATVNNGALGAR 344
W+ +PR S + +S+ E++E L S P SRVS T + ALG
Sbjct: 1910 WVAMPRRQPPSGGLSSSSDSEEEELEELPSVPRPLQPEFSGSRVSLTDIPTEDE-ALG-- 1966

Query: 345 AVITPSLGSEKP------NRTRAATKDPSSPEFLPIPSFE 446
TP G+ P RT + ++ SPE LP P E
Sbjct: 1967 ---TPEAGAATPMDWQEQERTPSKDQEAPSPEALPSPGQE 2003


>sp|Q696W0|SPEG_DANRE Striated muscle preferentially expressed protein
kinase OS=Danio rerio GN=speg PE=2 SV=1
Length = 2995

Score = 30.8 bits (68), Expect = 3.7
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +3

Query: 216 LKHESKSEKVENLKSSSFVPRLPASRVSCAANATVNNGALGARAVITPSLGSEKPNRTRA 395
L H S S K L + +L R TVN G R + +LG + RT +
Sbjct: 1714 LPHRSSSPKTAKLSKEDYALKLDLMRQRLLKGGTVNKNMSGLRGPLLETLGVDDERRTSS 1773

Query: 396 ATKD 407
++
Sbjct: 1774 LDRN 1777


>sp|Q5XFW8|SEC13_RAT Protein SEC13 homolog OS=Rattus norvegicus
GN=Sec13 PE=1 SV=1
Length = 322

Score = 30.8 bits (68), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3

Query: 359 WRDHRPSPESTIVHSGICSTRNSRCWEPRD 270
W++ + E T HSG S+ NS CW P D
Sbjct: 86 WKEENGTWEKTHEHSGHDSSVNSVCWAPHD 115


>sp|Q9D1M0|SEC13_MOUSE Protein SEC13 homolog OS=Mus musculus
GN=Sec13 PE=2 SV=3
Length = 322

Score = 30.8 bits (68), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3

Query: 359 WRDHRPSPESTIVHSGICSTRNSRCWEPRD 270
W++ + E T HSG S+ NS CW P D
Sbjct: 86 WKEENGTWEKTHEHSGHDSSVNSVCWAPHD 115


tr_hit_id O82392
Definition tr|O82392|O82392_ARATH Putative thiamin biosynthesis protein OS=Arabidopsis thaliana
Align length 108
Score (bit) 69.7
E-value 7.0e-11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917673|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_A09.
(505 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|O82392|O82392_ARATH Putative thiamin biosynthesis protein OS=... 70 7e-11
tr|A9PJ85|A9PJ85_POPJC Putative uncharacterized protein OS=Popul... 69 1e-10
tr|Q9AUL7|Q9AUL7_ORYSA Putative thiamin biosynthesis protein OS=... 68 2e-10
tr|Q10F62|Q10F62_ORYSJ Os03g0679700 protein OS=Oryza sativa subs... 68 2e-10
tr|A9U0I3|A9U0I3_PHYPA Predicted protein OS=Physcomitrella paten... 67 4e-10
tr|Q9AXS1|Q9AXS1_POASE Putative thiamine biosythesis protein Thi... 67 6e-10
tr|B6U4S7|B6U4S7_MAIZE Thiamine biosynthesis protein thiC OS=Zea... 65 2e-09
tr|A9SKH4|A9SKH4_PHYPA Predicted protein OS=Physcomitrella paten... 59 2e-07
tr|A5B0Y1|A5B0Y1_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06
tr|B8CG62|B8CG62_THAPS Predicted protein OS=Thalassiosira pseudo... 39 0.14
tr|B8C8G5|B8C8G5_THAPS Thiamin biosynthesis protein OS=Thalassio... 39 0.14
tr|A4HE47|A4HE47_LEIBR Putative uncharacterized protein OS=Leish... 39 0.14
tr|B7G4W8|B7G4W8_PHATR Predicted protein OS=Phaeodactylum tricor... 38 0.24
tr|A8IZH2|A8IZH2_CHLRE Predicted protein OS=Chlamydomonas reinha... 38 0.31
tr|B6NLU1|B6NLU1_BRAFL Putative uncharacterized protein OS=Branc... 37 0.53
tr|Q55SQ2|Q55SQ2_CRYNE Putative uncharacterized protein OS=Crypt... 37 0.53
tr|Q869U3|Q869U3_DICDI Similar to Dictyostelium discoideum (Slim... 37 0.69
tr|Q551I6|Q551I6_DICDI Gelsolin-related protein OS=Dictyostelium... 37 0.69
tr|Q5KH39|Q5KH39_CRYNE Expressed protein OS=Cryptococcus neoform... 36 0.90
tr|Q9M895|Q9M895_ARATH Cell division protein FtsH-like protein (... 36 1.2
tr|Q8LBL6|Q8LBL6_ARATH Cell division protein FtsH-like protein O... 36 1.2
tr|A4R7S2|A4R7S2_MAGGR Predicted protein OS=Magnaporthe grisea G... 35 1.5
tr|B6KT99|B6KT99_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.0
tr|B7S913|B7S913_9HYME Putative uncharacterized protein OS=Glypt... 34 3.4
tr|B4MYI0|B4MYI0_DROWI GK22225 OS=Drosophila willistoni GN=GK222... 34 3.4
tr|A8RAJ2|A8RAJ2_9FIRM Putative uncharacterized protein OS=Eubac... 34 4.6
tr|Q2GV41|Q2GV41_CHAGB Putative uncharacterized protein OS=Chaet... 34 4.6
tr|Q18I21|Q18I21_HALWD Major facilitator superfamily transporter... 34 4.6
tr|Q2KUW2|Q2KUW2_BORA1 Putative adenosine kinase OS=Bordetella a... 33 5.8
tr|B0D9L6|B0D9L6_LACBS Predicted protein OS=Laccaria bicolor (st... 33 5.8

>tr|O82392|O82392_ARATH Putative thiamin biosynthesis protein
OS=Arabidopsis thaliana GN=At2g29630 PE=2 SV=1
Length = 644

Score = 69.7 bits (169), Expect = 7e-11
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Frame = +3

Query: 210 AALKHESKSEKVENLKSSSFVPRLPASRVSCAANATVNNGALG-------ARAVIT---P 359
AA H + V N K+ S P+LP S + + V A RA +T P
Sbjct: 2 AASVHCTLMSVVCNNKNHSARPKLPNSSLLPGFDVVVQAAATRFKKETTTTRATLTFDPP 61

Query: 360 SLGSEKPNRTRAATKDPSSPEFLPIPSFEECFPNSTKESREIVHEPTG 503
+ SE+ + R T DPSSP+F PIPSFEECFP STKE +E+VHE +G
Sbjct: 62 TTNSERAKQ-RKHTIDPSSPDFQPIPSFEECFPKSTKEHKEVVHEESG 108


>tr|A9PJ85|A9PJ85_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 637

Score = 68.9 bits (167), Expect = 1e-10
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +3

Query: 288 SRVSCAANATVNNGALGARAVITPSLGSEKPNRT--RAATKDPSSPEFLPIPSFEECFPN 461
S +C ++ A GARA +T + P RT + T DPSSP+FLP+PSFE+CFP
Sbjct: 32 SSAACKKEFCAHSMASGARATLT----FDPPTRTNQKKHTVDPSSPDFLPLPSFEQCFPK 87

Query: 462 STKESREIVHEPTG 503
STKE RE+ HE +G
Sbjct: 88 STKEYREVKHEESG 101


>tr|Q9AUL7|Q9AUL7_ORYSA Putative thiamin biosynthesis protein
OS=Oryza sativa GN=OSJNBa0067E01.3 PE=4 SV=1
Length = 628

Score = 68.2 bits (165), Expect = 2e-10
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +3

Query: 339 ARAVITPSLGSEKPNRTRAATKDPSSPEFLPIPSFEECFPNSTKESREIVHEPTG 503
A +V S R T DPS+PEFLP+PSFEECFP STKESREIVHE +G
Sbjct: 40 AASVTDQSTAEPAKPRQNKHTVDPSAPEFLPLPSFEECFPRSTKESREIVHEESG 94


>tr|Q10F62|Q10F62_ORYSJ Os03g0679700 protein OS=Oryza sativa subsp.
japonica GN=Os03g0679700 PE=2 SV=1
Length = 639

Score = 68.2 bits (165), Expect = 2e-10
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +3

Query: 339 ARAVITPSLGSEKPNRTRAATKDPSSPEFLPIPSFEECFPNSTKESREIVHEPTG 503
A +V S R T DPS+PEFLP+PSFEECFP STKESREIVHE +G
Sbjct: 51 AASVTDQSTAEPAKPRQNKHTVDPSAPEFLPLPSFEECFPRSTKESREIVHEESG 105


>tr|A9U0I3|A9U0I3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_153830 PE=4 SV=1
Length = 598

Score = 67.4 bits (163), Expect = 4e-10
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3

Query: 384 RTRAATKDPSSPEFLPIPSFEECFPNSTKESREIVHEPTG 503
RTR TKDP++P+F PIPSFEECFP+STKE +E+VHEPTG
Sbjct: 18 RTRP-TKDPAAPDFKPIPSFEECFPSSTKEIKEVVHEPTG 56


>tr|Q9AXS1|Q9AXS1_POASE Putative thiamine biosythesis protein ThiC
OS=Poa secunda PE=2 SV=1
Length = 643

Score = 66.6 bits (161), Expect = 6e-10
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +3

Query: 309 NATVNNGALGARAVITPSLGSEKPNRTRAATKDPSSPEFLPIPSFEECFPNSTKESREIV 488
NA++ A +V S+ R + T DP++PEFLP+P+FEECFP STKES EIV
Sbjct: 46 NASLTCSRPKAASVTDQSVAEPAKPRQKKQTVDPAAPEFLPLPAFEECFPRSTKESSEIV 105

Query: 489 HEPTG 503
HE +G
Sbjct: 106 HEKSG 110


>tr|B6U4S7|B6U4S7_MAIZE Thiamine biosynthesis protein thiC OS=Zea
mays PE=2 SV=1
Length = 643

Score = 65.1 bits (157), Expect = 2e-09
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +3

Query: 339 ARAVITPSLGSEKPNRTRAATKDPSSPEFLPIPSFEECFPNSTKESREIVHEPTG 503
A +V S+ + T DP++PEFLP+PSFEECFP STKES EI+HE +G
Sbjct: 55 AASVTDQSIAEPPKTKQNRHTVDPTAPEFLPLPSFEECFPRSTKESSEIIHEESG 109


>tr|A9SKH4|A9SKH4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_58059 PE=4 SV=1
Length = 668

Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = +3

Query: 357 PSLGSEKPNRTRAATKDPSSPEFLPIPSFEECFPNSTKESR--EIVHEPTG 503
PS + RTR T DP++P+F PIP+FEECFPNSTKE+ E+VH TG
Sbjct: 76 PSSSASGVGRTRP-TSDPAAPDFKPIPAFEECFPNSTKETMHIEVVHSTTG 125


>tr|A5B0Y1|A5B0Y1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018106 PE=4 SV=1
Length = 515

Score = 55.8 bits (133), Expect = 1e-06
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +3

Query: 405 DPSSPEFLPIPSFEECFPNSTKESREIVHEPTG 503
DPS+P+F P P+FE+CFP S+KE RE++HEP+G
Sbjct: 39 DPSAPDFEPHPTFEQCFPRSSKEYREVIHEPSG 71


>tr|B8CG62|B8CG62_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_11998 PE=4 SV=1
Length = 716

Score = 38.9 bits (89), Expect = 0.14
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +3

Query: 180 LLPRSSVSTTAALKHESKSEKVENLKSSSFV-----PRLPASRVSCAANATVNNGALGAR 344
LL S+ T ES E E + S V P +S+ + + +TV++ + G+R
Sbjct: 541 LLSFSASDTVEQPSEESVDEDAEVMHGSKMVGSGKSPSKKSSKAAIGSASTVSHASGGSR 600

Query: 345 AVITPSLGSEKPNRTRAATKDPSSPEFLPI 434
+ T S GS KPNR + T +S E P+
Sbjct: 601 SSRTGSKGSRKPNRRSSLTNSVTSNESGPL 630