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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917677
Clone id YMU001_000104_B01
Library
Length 446
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CATCAGCAAGCTTCTGCTCCAATATGATCCGTCGTTCTCTCCGTTCCTGCAAAATTTCAT
CTGAGACTTGTAATGGTTCTCAATAAACTGCTTGGCTGCTGCAACCTTTTGCCTAGTAAT
GGTGGATGGCAGCTCCTCAACAGTTTGTTTGCTTCCACTATCTGAGCCATGTGAGCTCTT
CTTCTTTCCAAGCAAAGCCTTTGCCCTTTGCTGTAACCTCTTAAACCAGCTCTTTGTGTC
TTCCATGAGCTAAATTTTCTGGAATCTCCACATGAGCTATTTTATGCAGACCCGTTTGTA
ACGACCTCTTTAGCTCGGTTCAAGCTGTTGAAGACCCCTTGTAAAGGTAGCTGTCTTATA
TTCCCTAATTTGCAAATCGCTCTTGTTCCTCAGCCTAACAAGGACAAAGGGGAGCTTTCC
ATTGAACCTGTAGAAGGCCCTCTCCT
■■Homology search results ■■ -
sp_hit_id Q0A8V7
Definition sp|Q0A8V7|DXS_ALHEH 1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1)
Align length 34
Score (bit) 30.0
E-value 4.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917677|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_B01.
         (446 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0A8V7|DXS_ALHEH 1-deoxy-D-xylulose-5-phosphate synthase OS=A...    30   4.6  

>sp|Q0A8V7|DXS_ALHEH 1-deoxy-D-xylulose-5-phosphate synthase
           OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3
           SV=1
          Length = 628

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -2

Query: 277 AHVEIPENLAHGRHKELV*EVTAKGKGFAWKEEE 176
           A VE+  NLAH R   L+  VT KGKG+   E++
Sbjct: 262 ALVEVLGNLAHQRGPRLLHVVTCKGKGYRPAEQD 295
tr_hit_id A9SJX9
Definition tr|A9SJX9|A9SJX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 75
Score (bit) 62.8
E-value 8.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917677|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_B01.
         (446 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SJX9|A9SJX9_PHYPA Predicted protein OS=Physcomitrella paten...    63   8e-09
tr|A9RQ95|A9RQ95_PHYPA Predicted protein OS=Physcomitrella paten...    61   2e-08
tr|A9SKA9|A9SKA9_PHYPA Predicted protein OS=Physcomitrella paten...    59   1e-07
tr|Q6L6R7|Q6L6R7_WHEAT Protein kinase OS=Triticum aestivum GN=WN...    55   2e-06
tr|Q6L6R6|Q6L6R6_WHEAT Protein kinase OS=Triticum aestivum GN=WN...    55   2e-06
tr|Q6L615|Q6L615_TRIMO WNdr1A-like protein kinase OS=Triticum mo...    55   2e-06
tr|Q6L614|Q6L614_AEGSP WNdr1B-like protein kinase OS=Aegilops sp...    55   2e-06
tr|Q6L613|Q6L613_AEGTA WNdr1D-like protein kinase OS=Aegilops ta...    55   2e-06
tr|Q9AUZ4|Q9AUZ4_ORYSJ Putative uncharacterized protein OSJNBa00...    54   3e-06
tr|Q7G7X1|Q7G7X1_ORYSA Putative kinase OS=Oryza sativa GN=OSJNBb...    54   3e-06
tr|Q0IX06|Q0IX06_ORYSJ Os10g0476100 protein OS=Oryza sativa subs...    54   3e-06
tr|A7NXD3|A7NXD3_VITVI Chromosome chr5 scaffold_2, whole genome ...    54   3e-06
tr|A5BWH0|A5BWH0_VITVI Putative uncharacterized protein OS=Vitis...    54   3e-06
tr|A2Z8I4|A2Z8I4_ORYSI Putative uncharacterized protein OS=Oryza...    54   3e-06
tr|Q6L535|Q6L535_ORYSJ Os05g0511400 protein OS=Oryza sativa subs...    54   5e-06
tr|B8B015|B8B015_ORYSI Putative uncharacterized protein OS=Oryza...    54   5e-06
tr|A3B5R8|A3B5R8_ORYSJ Putative uncharacterized protein OS=Oryza...    54   5e-06
tr|A7Q1R0|A7Q1R0_VITVI Chromosome chr7 scaffold_44, whole genome...    53   9e-06
tr|A5B9W2|A5B9W2_VITVI Putative uncharacterized protein OS=Vitis...    53   9e-06
tr|Q53VE2|Q53VE2_LOTJA Ser/Thr protein kinase OS=Lotus japonicus...    51   2e-05
tr|A7Q4V3|A7Q4V3_VITVI Chromosome chr10 scaffold_50, whole genom...    51   2e-05
tr|Q9SIM2|Q9SIM2_ARATH Putative uncharacterized protein At2g2047...    50   6e-05
tr|Q1PF34|Q1PF34_ARATH Protein kinase OS=Arabidopsis thaliana GN...    50   6e-05
tr|A9SKA7|A9SKA7_PHYPA Predicted protein OS=Physcomitrella paten...    50   7e-05
tr|Q9LW99|Q9LW99_MESCR Protein kinase MK6 OS=Mesembryanthemum cr...    49   9e-05
tr|A9RQ93|A9RQ93_PHYPA Predicted protein OS=Physcomitrella paten...    49   1e-04
tr|Q9SA79|Q9SA79_ARATH T5I8.9 protein OS=Arabidopsis thaliana GN...    48   3e-04
tr|A9SJX7|A9SJX7_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|Q2QTL1|Q2QTL1_ORYSJ Os12g0290100 protein OS=Oryza sativa subs...    45   0.002
tr|A2ZJP2|A2ZJP2_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002

>tr|A9SJX9|A9SJX9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_229854 PE=4 SV=1
          Length = 541

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 36/75 (48%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTV-----------EELPSTITRQKVA 100
           ME T+SWF R Q R   L               + +           EELPS+ITRQKVA
Sbjct: 1   MEQTRSWFNRFQSRGDRLKSSESKKNGSGSDSGKDLVKTAGSDLDAGEELPSSITRQKVA 60

Query: 99  AAKQFIENHYKSQMK 55
           AAKQ+IENHYKSQMK
Sbjct: 61  AAKQYIENHYKSQMK 75


>tr|A9RQ95|A9RQ95_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_118072 PE=4 SV=1
          Length = 538

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTV-----------EELPSTITRQKVA 100
           ME T+SWF R Q R   L               + +           +ELPS+ITRQKVA
Sbjct: 1   MEQTRSWFNRFQPRGDRLKSNESKKNGSGSDSGKDLLRTAGSDQDVGDELPSSITRQKVA 60

Query: 99  AAKQFIENHYKSQMK 55
           AAKQ+IENHYKSQMK
Sbjct: 61  AAKQYIENHYKSQMK 75


>tr|A9SKA9|A9SKA9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_131231 PE=4 SV=1
          Length = 539

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 34/76 (44%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXK------------QTVEELPSTITRQKV 103
           ME T+SWF R Q R   +                              +ELPS+ITRQKV
Sbjct: 1   MEQTRSWFNRFQPRGDRIKSNESKKNGSAGSESGKDPLKSPRPDANASDELPSSITRQKV 60

Query: 102 AAAKQFIENHYKSQMK 55
           AAAKQ+IENHYKSQMK
Sbjct: 61  AAAKQYIENHYKSQMK 76


>tr|Q6L6R7|Q6L6R7_WHEAT Protein kinase OS=Triticum aestivum
           GN=WNdr1B PE=2 SV=1
          Length = 557

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF++ Q R K+               K  V++ PS+ T+QKVAAAKQ+IENHYK
Sbjct: 1   MDSARSWFQKFQPRDKSK-SPAVPASHGKDPGKPPVDDAPSSATKQKVAAAKQYIENHYK 59

Query: 66  SQMK 55
           +QMK
Sbjct: 60  TQMK 63


>tr|Q6L6R6|Q6L6R6_WHEAT Protein kinase OS=Triticum aestivum
           GN=WNdr1A PE=2 SV=1
          Length = 557

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF++ Q R K+               K  V++ PS+ T+QKVAAAKQ+IENHYK
Sbjct: 1   MDSARSWFQKFQPRDKSK-SPAVPASHGKDPGKPPVDDAPSSATKQKVAAAKQYIENHYK 59

Query: 66  SQMK 55
           +QMK
Sbjct: 60  TQMK 63


>tr|Q6L615|Q6L615_TRIMO WNdr1A-like protein kinase OS=Triticum
           monococcum subsp. aegilopoides PE=2 SV=1
          Length = 557

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF++ Q R K+               K  V++ PS+ T+QKVAAAKQ+IENHYK
Sbjct: 1   MDSARSWFQKFQPRDKSK-SPAVPASHGKDPGKPPVDDAPSSATKQKVAAAKQYIENHYK 59

Query: 66  SQMK 55
           +QMK
Sbjct: 60  TQMK 63


>tr|Q6L614|Q6L614_AEGSP WNdr1B-like protein kinase OS=Aegilops
           speltoides PE=2 SV=1
          Length = 557

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF++ Q R K+               K  V++ PS+ T+QKVAAAKQ+IENHYK
Sbjct: 1   MDSARSWFQKFQPRDKSK-SPAVPASHGKDPGKPPVDDAPSSATKQKVAAAKQYIENHYK 59

Query: 66  SQMK 55
           +QMK
Sbjct: 60  TQMK 63


>tr|Q6L613|Q6L613_AEGTA WNdr1D-like protein kinase OS=Aegilops
           tauschii PE=2 SV=1
          Length = 557

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF++ Q R K+               K  V++ PS+ T+QKVAAAKQ+IENHYK
Sbjct: 1   MDSARSWFQKFQPRDKSK-SPAVPASHGKDPGKPPVDDAPSSATKQKVAAAKQYIENHYK 59

Query: 66  SQMK 55
           +QMK
Sbjct: 60  TQMK 63


>tr|Q9AUZ4|Q9AUZ4_ORYSJ Putative uncharacterized protein
           OSJNBa0026O12.14 (Putative uncharacterized protein)
           (Protein kinase domain containing protein, expressed)
           OS=Oryza sativa subsp. japonica GN=OSJNBa0026O12.14 PE=4
           SV=1
          Length = 528

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF +LQ R K++              K+  +E PS+ T+Q+VAAAKQ+IE HYK
Sbjct: 1   MDSARSWFTKLQTREKSI----GKKKELPPNGKEGTDEAPSSATKQRVAAAKQYIEKHYK 56

Query: 66  SQMK 55
            QMK
Sbjct: 57  EQMK 60


>tr|Q7G7X1|Q7G7X1_ORYSA Putative kinase OS=Oryza sativa
           GN=OSJNBb0044B19.9 PE=4 SV=1
          Length = 528

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%)
 Frame = -3

Query: 246 MEDTKSWFKRLQQRAKALLXXXXXXXXXXXXXKQTVEELPSTITRQKVAAAKQFIENHYK 67
           M+  +SWF +LQ R K++              K+  +E PS+ T+Q+VAAAKQ+IE HYK
Sbjct: 1   MDSARSWFTKLQTREKSI----GKKKELPPNGKEGTDEAPSSATKQRVAAAKQYIEKHYK 56

Query: 66  SQMK 55
            QMK
Sbjct: 57  EQMK 60