BP917680 [AcEST]

BP917680
Clone id	YMU001_000104_B04
Library	YMU01
Length	529
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000104_B04.
Accession	BP917680
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GTCAAACTGCTGTATGAACATAAGAGCTCGGCAGGCATCCTTGAAGCCTAAAAAAGTATC AAAGTGTACCAGTTTGACCCCCATCCTTAAACTCTTAGGTCTTCTTCCTCCTGTTCTCAC CGTTTGAATTGTCAAAAGAGGAAACAATCTTCTCCCCTGAGTTGCTAGAGTGGTAATGCG TGAAGTAAAGATCTCACACTATTCAGAGGCTTATTGCACGTGCCAAGGAAGGCTTAGGTA TGCATTCAGGCGCTTTGACCTAACTGATGGAGAAGCCATAGTTCAAGTCAACGGGAAAGG AGTCTTTTAAGGAAAAGAAGAAGGGCTAGGAGCAGTACAAGAGATCCATAGGGATGTGGT GAATAGGGACATATCTTCTAGAAATGTCCAAAGAAAGAACTGGTTGATAGTCCATCAGAG AGTTCCGAAGAACCAAGGGAACATGCTGGTAGCTCATCAAAGAGTTTCGGAGATTTAGAA CGATGGTGCTAGTGGACTGGCCAGAGCAGCAACCAATAGGTCCGAGGGC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P26366
Definition	sp\|P26366\|AMIB_SALTY N-acetylmuramoyl-L-alanine amidase amiB OS=Salmonella typhimurium
Align length	85
Score (bit)	30.4
E-value	5.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917680\|Adiantum capillus-veneris mRNA, clone: YMU001_000104_B04. (529 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P26366\|AMIB_SALTY N-acetylmuramoyl-L-alanine amidase amiB OS=... 30 5.5 >sp\|P26366\|AMIB_SALTY N-acetylmuramoyl-L-alanine amidase amiB OS=Salmonella typhimurium GN=amiB PE=3 SV=2 Length = 439 Score = 30.4 bits (67), Expect = 5.5 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +2 Query: 266 DGEAIVQVNGKGVFGKEEGLGAVQEIHRDVV-NRDISSRNVQRKNWLIVHQRVPKNQGN 442 DG+ + V G+ +++ + IH D NRD + +V W++ ++R N Sbjct: 237 DGDYFISVMGRSDV-ARKQNANFLVSIHADAAPNRDATGASV----WVLSNRRANSEMAN 291 Query: 443 MLVAHQRVSEINDGASGLARAATN 517 L H++ SE+ LA + ++ Sbjct: 292 WLEQHEKQSELLGGAGDVLANSQSD 316
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0WAZ4
Definition	tr\|B0WAZ4\|B0WAZ4_CULQU Speckle-type POZ protein B OS=Culex quinquefasciatus
Align length	46
Score (bit)	35.0
E-value	2.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917680\|Adiantum capillus-veneris mRNA, clone: YMU001_000104_B04. (529 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0WAZ4\|B0WAZ4_CULQU Speckle-type POZ protein B OS=Culex quinq... 35 2.4 >tr\|B0WAZ4\|B0WAZ4_CULQU Speckle-type POZ protein B OS=Culex quinquefasciatus GN=CpipJ_CPIJ004154 PE=4 SV=1 Length = 233 Score = 35.0 bits (79), Expect = 2.4 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = -1 Query: 520 PIGCCSGQSTSTIVLNLRNSLMSYQHVPLVLRNSLMDYQPVLSLDI 383 P CC+ +TI ++L++ + +++ LV+ SL +Y+P S+ I Sbjct: 16 PYSCCTDTKATTITMSLKSQACNLRNILLVVMISLTEYEPEASMPI 61