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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917691
Clone id YMU001_000104_C04
Library
Length 330
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCCAGAAGACTTGTGATTTTGTACCTGCTCGTGCACAGGTGATCCAATCTTCTCCCCTC
GAACAGCCTTAGCTTGAGCACTATCCTCAGTATGCATAACTGATTTTTCACGCCATTCTT
GACCATTGCCAGTAAGCACAACAAAGTCCTCACCATCCTCACTATCATCGGCAATACCTT
CATTTACAGCTTTCCGCAAGGGACCTAGGACAATGCGTAAGTCATCGTCACTATCGGTTG
CAAGGTCATCTGCCCTAAAAGCAATGCCTGCAGCATCAATACTGCCATTTTTGCAATTGT
TTNCATGCCCTGCTCGATTATCCTTCCTGG
■■Homology search results ■■ -
sp_hit_id Q9HCN8
Definition sp|Q9HCN8|SDF2L_HUMAN Stromal cell-derived factor 2-like protein 1 OS=Homo sapiens
Align length 107
Score (bit) 32.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917691|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_C04.
         (330 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9HCN8|SDF2L_HUMAN Stromal cell-derived factor 2-like protein...    32   1.00 
sp|Q3T083|SDF2L_BOVIN Stromal cell-derived factor 2-like protein...    32   1.3  
sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-inter...    31   1.7  
sp|Q24256|BARH2_DROME Homeobox protein B-H2 OS=Drosophila melano...    30   2.9  
sp|Q9RA11|YU61_VIBMA UPF0061 protein ORF18 OS=Vibrio marinus PE=...    30   2.9  
sp|Q8BXK8|AGAP1_MOUSE Arf-GAP, GTPase, ANK repeat and PH domain-...    30   2.9  
sp|Q9UPQ3|AGAP1_HUMAN Arf-GAP, GTPase, ANK repeat and PH domain-...    30   2.9  
sp|Q9H8Y1|CN115_HUMAN Uncharacterized protein C14orf115 OS=Homo ...    30   3.8  
sp|Q5A2K0|NST1_CANAL Stress response protein NST1 OS=Candida alb...    30   4.9  
sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoid...    29   6.4  
sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=...    29   6.5  
sp|P51022|PNT1_DROME ETS-like protein pointed, isoform P1 OS=Dro...    29   8.4  
sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/...    29   8.4  
sp|Q7S6P8|BFR2_NEUCR Protein bfr-2 OS=Neurospora crassa GN=bfr-2...    29   8.4  

>sp|Q9HCN8|SDF2L_HUMAN Stromal cell-derived factor 2-like protein 1
           OS=Homo sapiens GN=SDF2L1 PE=1 SV=2
          Length = 221

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
 Frame = -3

Query: 316 RAGHXNNCKNGSIDAAGIAFRXXXXXXXXXXXLRIVLGPLRKAVNEGIADDSEDGE---- 149
           R G    C  GS    G A R                 PL    N+ ++   EDGE    
Sbjct: 85  RGGSEGGCPRGSPVRCGQAVRLTHVLTGKNLHTHHFPSPLSN--NQEVSAFGEDGEGDDL 142

Query: 148 DFVVLTGNGQEWREKSVMHTEDSAQAK--AVRGEKIGSPVHEQVQNH 14
           D   +  +GQ W  ++ +  +    +   +V GE+ GSP+  Q + H
Sbjct: 143 DLWTVRCSGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEVH 189


>sp|Q3T083|SDF2L_BOVIN Stromal cell-derived factor 2-like protein 1
           OS=Bos taurus GN=SDF2L1 PE=2 SV=1
          Length = 221

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
 Frame = -3

Query: 316 RAGHXNNCKNGSIDAAGIAFRXXXXXXXXXXXLRIVLGPLRKAVNEGIADDSEDGE---- 149
           R G    C  GS    G A R                 PL    N+ ++   EDGE    
Sbjct: 85  RGGTEGECPRGSPVRCGQAVRLTHVLTGKNLHTHHFPSPLTN--NQEVSAFGEDGEGDDL 142

Query: 148 DFVVLTGNGQEWREKSVMHTEDSAQAK--AVRGEKIGSPVHEQVQNH 14
           D   +  +GQ W  ++ +  +    +   +V GE+ GSP+  Q + H
Sbjct: 143 DLWTVRCSGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEVH 189


>sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental
           retardation-interacting protein 2 OS=Homo sapiens
           GN=NUFIP2 PE=1 SV=1
          Length = 695

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +1

Query: 124 HCQ*AQQSPHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHLP*KQCLQH 276
           H Q  QQ PHH H++  Y H            SH H+    H    Q LQH
Sbjct: 22  HPQQQQQQPHHHHHYYFYNH------------SHNHHHHHHHQQPHQYLQH 60


>sp|Q24256|BARH2_DROME Homeobox protein B-H2 OS=Drosophila
           melanogaster GN=B-H2 PE=1 SV=3
          Length = 645

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
 Frame = +1

Query: 55  PLEQP*LEHYPQYA*LIFHAILDHCQ*AQQSPHHPHYHRQYLHLQLSARDLGQCVSHRH- 231
           P+    L H+P       +A+L   Q  QQ   HPH H    HLQL    L     HRH 
Sbjct: 176 PMPPHLLAHFPP----AHYAVLQQQQQQQQQQQHPHPH----HLQLERERLE--ALHRHG 225

Query: 232 YRLQG----HLP*KQCLQHQYCH 288
           + L G    HL     L HQ  H
Sbjct: 226 HGLTGDPAQHLSHLSHLSHQQHH 248


>sp|Q9RA11|YU61_VIBMA UPF0061 protein ORF18 OS=Vibrio marinus PE=3
           SV=1
          Length = 557

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -3

Query: 208 LGPLRKAVNEGIADDSEDGEDFVVLTGNGQEWREKSVMHTEDSAQAKAV 62
           +GPL+K+    + +D+ D  D + L     EW EK  M    +  AK +
Sbjct: 425 IGPLKKSFYSNLYNDAADDPDTLALEKYWIEWLEKWQMLLNSTCDAKGI 473


>sp|Q8BXK8|AGAP1_MOUSE Arf-GAP, GTPase, ANK repeat and PH
           domain-containing protein 1 OS=Mus musculus GN=Agap1
           PE=2 SV=1
          Length = 857

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = -3

Query: 178 GIADDSEDGEDFVVLTGNGQEWREKSVMHTEDSAQAKAVRGEKIGS 41
           G A++ E+  +F++++  GQ W  ++  + E  A  +A+  + + S
Sbjct: 545 GTAEEQEENLEFIIVSLTGQTWHFEATTYEERDAWVQAIESQILAS 590


>sp|Q9UPQ3|AGAP1_HUMAN Arf-GAP, GTPase, ANK repeat and PH
           domain-containing protein 1 OS=Homo sapiens GN=AGAP1
           PE=1 SV=4
          Length = 857

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = -3

Query: 178 GIADDSEDGEDFVVLTGNGQEWREKSVMHTEDSAQAKAVRGEKIGS 41
           G A++ E+  +F++++  GQ W  ++  + E  A  +A+  + + S
Sbjct: 545 GTAEEQEENFEFIIVSLTGQTWHFEATTYEERDAWVQAIESQILAS 590


>sp|Q9H8Y1|CN115_HUMAN Uncharacterized protein C14orf115 OS=Homo
           sapiens GN=C14orf115 PE=2 SV=1
          Length = 702

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 178 LHLQLSARDLGQCVSHRHYRLQGHLP*KQCLQHQYCHFCN 297
           L L+L AR + + + HRHY LQG +  K  LQ      C+
Sbjct: 100 LSLELRARTVVEMLLHRHYYLQGMIDSKVMLQAVRYSLCS 139


>sp|Q5A2K0|NST1_CANAL Stress response protein NST1 OS=Candida
           albicans GN=NST1 PE=3 SV=1
          Length = 1399

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 136 AQQSPHHPHYHRQYLHLQLSARDLGQCVSHRH 231
           A  +PHH H+H Q+ + Q    D   C +HRH
Sbjct: 586 ACDNPHHHHHHHQHSNKQ---HDHHHCHNHRH 614


>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum
           GN=mybI PE=3 SV=1
          Length = 977

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/69 (27%), Positives = 28/69 (40%)
 Frame = +1

Query: 73  LEHYPQYA*LIFHAILDHCQ*AQQSPHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHL 252
           L  YP++     H ++D+    QQ  HH  +H+Q    Q       Q   H   + Q H 
Sbjct: 44  LPQYPRFLDNSHHQVMDNSDHEQQQQHH--HHQQQQQQQQHHHQQQQQQQHHQQQQQQHH 101

Query: 253 P*KQCLQHQ 279
             +Q   HQ
Sbjct: 102 QQQQQHHHQ 110
tr_hit_id B4M9N8
Definition tr|B4M9N8|B4M9N8_DROVI GJ18352 OS=Drosophila virilis
Align length 51
Score (bit) 34.7
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917691|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_C04.
         (330 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4M9N8|B4M9N8_DROVI GJ18352 OS=Drosophila virilis GN=GJ18352 ...    35   2.5  
tr|B4IZV3|B4IZV3_DROGR GH16421 OS=Drosophila grimshawi GN=GH1642...    35   2.5  
tr|B4JUU0|B4JUU0_DROGR GH15023 OS=Drosophila grimshawi GN=GH1502...    34   3.2  
tr|B4LKM8|B4LKM8_DROVI GJ22216 OS=Drosophila virilis GN=GJ22216 ...    34   4.2  
tr|Q38E49|Q38E49_9TRYP Putative uncharacterized protein OS=Trypa...    33   5.5  
tr|Q4PF35|Q4PF35_USTMA Putative uncharacterized protein OS=Ustil...    33   5.5  
tr|Q5BCA1|Q5BCA1_EMENI Putative uncharacterized protein OS=Emeri...    33   7.0  
tr|A8JF52|A8JF52_CHLRE Voltage-gated Ca2+ channel, alpha subunit...    33   7.2  
tr|B4L8X2|B4L8X2_DROMO GI16660 OS=Drosophila mojavensis GN=GI166...    33   7.2  
tr|B5DQC9|B5DQC9_DROPS GA23400 OS=Drosophila pseudoobscura pseud...    33   9.4  
tr|B4JMS7|B4JMS7_DROGR GH24275 OS=Drosophila grimshawi GN=GH2427...    33   9.4  

>tr|B4M9N8|B4M9N8_DROVI GJ18352 OS=Drosophila virilis GN=GJ18352
           PE=4 SV=1
          Length = 213

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 139 QQSPHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHLP*KQCLQHQYCHF 291
           QQ  HH HY +   HLQL  +   Q + H  ++ Q     +Q  QHQ  H+
Sbjct: 145 QQQQHHQHYLQHQQHLQLQHQQQQQQLQHHQHQQQ-----QQQQQHQLYHY 190


>tr|B4IZV3|B4IZV3_DROGR GH16421 OS=Drosophila grimshawi GN=GH16421
           PE=4 SV=1
          Length = 749

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 145 SPHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHL 252
           +PHHPH+H Q+ H  L +       +H H     HL
Sbjct: 53  APHHPHHHHQFHHHHLHSHHHSHTHAHHHQHHHQHL 88


>tr|B4JUU0|B4JUU0_DROGR GH15023 OS=Drosophila grimshawi GN=GH15023
           PE=4 SV=1
          Length = 396

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 148 PHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHLP*KQCLQHQYCH 288
           PHH H+H+ + H Q  A      ++H H++ Q H P      HQ+ H
Sbjct: 325 PHHHHHHQHHHHQQQHANAPPTPLTHYHHQQQQHQP----HHHQHIH 367


>tr|B4LKM8|B4LKM8_DROVI GJ22216 OS=Drosophila virilis GN=GJ22216 PE=4
            SV=1
          Length = 1044

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = +1

Query: 124  HCQ*AQQSPHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHLP*KQCLQHQYCH 288
            H Q  QQSPH  H+ +Q  H+Q         V H   + Q     +Q LQ  Y H
Sbjct: 983  HMQQQQQSPHQAHHQQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQLQQIYQH 1037


>tr|Q38E49|Q38E49_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb09.211.1070 PE=4 SV=1
          Length = 1030

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +1

Query: 1   LQKTCDFVPARAQVIQSSPLEQP*LEHYPQYA*LI-FHAILDHCQ*AQQSPHHPHYHRQY 177
           +  T    PA   V    P  Q  L H+  +  LI  H      Q  QQ PHH H+H  +
Sbjct: 467 MNTTAPATPAVGAVSPPPPSAQRPLPHHHHHLHLIQHHQQSQQNQQQQQQPHHHHHHHHH 526

Query: 178 LH 183
           +H
Sbjct: 527 IH 528


>tr|Q4PF35|Q4PF35_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM01278.1 PE=4 SV=1
          Length = 1195

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +1

Query: 46  QSSPLEQP*LE-HYPQYA*LIFHAILDHCQ*AQQSPHHPHYHRQYLHLQLSARDLGQCVS 222
           Q   L+QP L+  +PQ+   + H  L H Q  QQS  HP   +Q+L   L A    Q   
Sbjct: 102 QHQQLQQPQLQLQHPQHPQHLQH--LHHSQLQQQSQQHPQQQQQHLQHHLGA----QQQH 155

Query: 223 HRHYRLQGHLP*KQCLQHQ 279
           H   + Q HL  +Q  Q Q
Sbjct: 156 HVQLQQQQHLQQQQQQQQQ 174


>tr|Q5BCA1|Q5BCA1_EMENI Putative uncharacterized protein
           OS=Emericella nidulans GN=AN1829.2 PE=4 SV=1
          Length = 578

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -3

Query: 211 VLGPLRKAVNEGIADDSEDGEDFVVLTGNGQEWREKSVMHTEDSAQAKAVRGEKIGSPVH 32
           VL P   ++++ I+  S   E F +LT     WRE      + S + K   G +I SP  
Sbjct: 64  VLEPGHPSMSQAISRPSRQKEKFKILTVEPTRWREGK---NDASREEKTPGGNEITSPAS 120

Query: 31  EQVQNHKSSG 2
           EQ      SG
Sbjct: 121 EQALETSISG 130


>tr|A8JF52|A8JF52_CHLRE Voltage-gated Ca2+ channel, alpha subunit
            OS=Chlamydomonas reinhardtii GN=CAV4 PE=4 SV=1
          Length = 2752

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 183  MKVLPMIVRMVRT---LLCLLAMVKNGVKNQLCILRIVLKLRLFEGRRLDHLCTSRYKIT 13
            M ++ MIV    T   ++ L+  V N + N L ILR+   LRLF   RL     S Y IT
Sbjct: 923  MNIMDMIVNAATTAEMIIELIPTVDNKLANTLSILRVFRLLRLF---RLSRQWKSLYAIT 979

Query: 12   SLL 4
            S L
Sbjct: 980  STL 982


>tr|B4L8X2|B4L8X2_DROMO GI16660 OS=Drosophila mojavensis GN=GI16660
            PE=4 SV=1
          Length = 1681

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +1

Query: 139  QQSPHHPHYHRQYLHLQLSARDLGQCVSHRHYRLQGHLP*KQCLQHQYCHFCNCXHALLD 318
            QQ   HPH H+Q  H QL         S+ H R  G  P    + HQ  ++ N  H+ + 
Sbjct: 958  QQQQQHPHQHQQQQHQQLQ-----HSTSNSHCRSSGGQP--LHVPHQPVNYGNAQHSSMS 1010

Query: 319  YPS 327
             P+
Sbjct: 1011 NPN 1013


>tr|B5DQC9|B5DQC9_DROPS GA23400 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA23400 PE=4 SV=1
          Length = 387

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = +1

Query: 148 PHHPHYHRQYLHLQLSARDLGQCVS----HRHYRLQG 246
           PHHPH H   LH Q   + L Q  S    H H+++ G
Sbjct: 211 PHHPHPHPHQLHQQQHQQHLAQMASPMYHHHHHQVTG 247