BP917694
Clone id YMU001_000104_C08
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAAGTGCATCATGTGAAACTTGTGGTAGATGGCTTATGCTCTAGGTAGCATGACTAGTTT
AGATCTATCAGGCGCTATTGGGGCTTCATACTTGGGTTTGAATGAATGAGGACAGCTTGG
GGATACTTTTTGAATGTGCCTTTTCACCAGTTAATTTTTCTATGTTTTTGGTAGGGGCTG
TTATATGCAGGCTTTCATAAAAGCAGCTGGTTGACCTTGATGTCAATCATGGATATATTT
TACCCTTTTCTTGGATTTCAGGAGGTTACATGGTGCACAAGTAGGGAAAGTGGGTGAATG
TCACCTATCTTGGTTTGTCAGAGATACTTTTATTTGGTCTGGCTACCAATCTCTTTCTAT
CGTTGAAATTTGACTAGAAACAAACCAAGAACAACAGCTCTGAGTTACTTTTTGCATTTT
TAGTGAAGCAGAAGACTAGGGATTAAGATATCCCTTGTAAGGGTGAAGAATACATCTCTA
ATTCTTTTGCTTGCTCTCAGTAGATTGGCCCCTTTGGTAGTAATCTCCC
■■Homology search results ■■ -
sp_hit_id Q9UUG5
Definition sp|Q9UUG5|MLR1_SCHPO Myosin regulatory light chain 1 OS=Schizosaccharomyces pombe
Align length 33
Score (bit) 30.0
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917694|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_C08.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UUG5|MLR1_SCHPO Myosin regulatory light chain 1 OS=Schizosa... 30 7.1
sp|Q61419|CMAH_MOUSE Cytidine monophosphate-N-acetylneuraminic a... 30 9.4

>sp|Q9UUG5|MLR1_SCHPO Myosin regulatory light chain 1
OS=Schizosaccharomyces pombe GN=rlc1 PE=1 SV=1
Length = 184

Score = 30.0 bits (66), Expect = 7.1
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = +3

Query: 105 NEDSLGILFECAFSPVNFSMFL--VGAVICRLS 197
+EDS+ +FE P+N + FL +G+++CR+S
Sbjct: 82 SEDSINHMFESINPPINLAAFLTAMGSMLCRIS 114


>sp|Q61419|CMAH_MOUSE Cytidine monophosphate-N-acetylneuraminic acid
hydroxylase OS=Mus musculus GN=Cmah PE=1 SV=1
Length = 577

Score = 29.6 bits (65), Expect = 9.4
Identities = 10/31 (32%), Positives = 23/31 (74%)
Frame = +2

Query: 299 CHLSWFVRDTFIWSGYQSLSIVEI*LETNQE 391
CH SW +++ F W+G+++ ++V +ET+++
Sbjct: 453 CHSSW-IKEYFTWAGFKNYNLVVRMIETDED 482


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917694|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_C08.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******