BP917696 |
Clone id |
YMU001_000104_C10 |
Library |
YMU01 |
Length |
403 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_C10. |
Accession |
BP917696 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTGTCTTTCTGTGTAGATTTCTTGTCTTTAATCCAAACCGGATCATTGACTTTGACTAA ATTGCTCTGAACAAACACTTGCTTTACTTTCTTCTTATTTCTTGAATACTTTGGCTGCTA TATCTTTGCTTTTCTGGGTGTCTTCTTAGAGGTGTCAGTTGGGTCAACCATTGACTTGAA GTTTTGAAAGCCTGACTTGCTTGAAAAGCTGACCCATGAGGGTTTTTTGATGTAGAGGCA TATGATATCACATCTTTTGTGCTAATCGGTGGAAGTTCCAGTTTAGCTTTACCTTTGTCT GCAAGATTTATCTTCGATTCTTGTGACTTATGCAACTCTGAATCCAGGATTAACAGTACC TGTAAATGTTGTTGTATACCTCTTGGAAAAGAGAGTATTAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q09950 |
Definition |
sp|Q09950|YSR2_CAEEL Uncharacterized protein F59B10.2 OS=Caenorhabditis elegans |
Align length |
92 |
Score (bit) |
32.3 |
E-value |
0.75 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917696|Adiantum capillus-veneris mRNA, clone: YMU001_000104_C10. (403 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q09950|YSR2_CAEEL Uncharacterized protein F59B10.2 OS=Caenorh... 32 0.75 sp|P53908|YNO3_YEAST Uncharacterized membrane protein YNL143C OS... 31 1.7 sp|P51818|HSP83_ARATH Heat shock protein 81-3 OS=Arabidopsis tha... 30 2.8 sp|P55737|HSP82_ARATH Heat shock protein 81-2 OS=Arabidopsis tha... 30 2.8 sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum l... 30 2.8 sp|Q17VM4|PNP_HELAH Polyribonucleotide nucleotidyltransferase OS... 30 2.8 sp|Q8Y339|ARGC_RALSO N-acetyl-gamma-glutamyl-phosphate reductase... 30 2.8 sp|Q11178|YPC1_CAEEL Uncharacterized protein C05D10.1 OS=Caenorh... 30 4.9 sp|P17121|SAC7_YEAST GTPase-activating protein SAC7 OS=Saccharom... 30 4.9 sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thal... 29 6.3 sp|O34528|YRVN_BACSU Uncharacterized AAA domain-containing prote... 29 8.3 sp|Q5RA02|XPOT_PONAB Exportin-T OS=Pongo abelii GN=XPOT PE=2 SV=1 29 8.3 sp|O43592|XPOT_HUMAN Exportin-T OS=Homo sapiens GN=XPOT PE=1 SV=2 29 8.3 sp|P42975|BIRA_BACSU Bifunctional protein birA OS=Bacillus subti... 29 8.3
>sp|Q09950|YSR2_CAEEL Uncharacterized protein F59B10.2 OS=Caenorhabditis elegans GN=F59B10.2 PE=2 SV=1 Length = 482
Score = 32.3 bits (72), Expect = 0.75 Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 8/92 (8%) Frame = -3
Query: 341 SELHKSQESKINLAD-KGKAKLELPPISTKDVISYASTSKNPHGSAFQASQAFKTSSQWL 165 SE S ES + ++ + ++K E S+K S AS+SK +GS F++ ++ +S+ + Sbjct: 226 SESSTSSESSSSASESESESKSESQVSSSKTSTSKASSSK-AYGSDFESEKSSSSSASTI 284
Query: 164 TQLTPLR-------RHPEKQRYSSQSIQEIRR 90 +++TP + + P+K+R I++ ++ Sbjct: 285 SKVTPKKLDKPQKTKKPDKKRAKPDDIRQNKK 316
>sp|P53908|YNO3_YEAST Uncharacterized membrane protein YNL143C OS=Saccharomyces cerevisiae GN=YNL143C PE=1 SV=1 Length = 130
Score = 31.2 bits (69), Expect = 1.7 Identities = 15/53 (28%), Positives = 30/53 (56%) Frame = -2
Query: 210 SFSSKSGFQNFKSMVDPTDTSKKTPRKAKI*QPKYSRNKKKVKQVFVQSNLVK 52 +F SGF +++++ +++SKK P+ + + K + KKK K V + +K Sbjct: 16 TFLILSGFDYYQTLLISSNSSKKRPKDSSLLSEKKKKKKKKKKDVLSYLSYLK 68
>sp|P51818|HSP83_ARATH Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2 Length = 699
Score = 30.4 bits (67), Expect = 2.8 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = -2
Query: 177 KSMVDPTDTSKKTPRKAKI*Q-----PKYSRNKKKVKQVFVQSNLVKVNDPVWIKDKKST 13 K + D + +K + K+ + K + KKK+K+V + +LV P+W++ + Sbjct: 216 KEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKIKEVSHEWDLVNKQKPIWMRKPEEI 275
Query: 12 QKDK 1 K++ Sbjct: 276 NKEE 279
>sp|P55737|HSP82_ARATH Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1 Length = 699
Score = 30.4 bits (67), Expect = 2.8 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = -2
Query: 177 KSMVDPTDTSKKTPRKAKI*Q-----PKYSRNKKKVKQVFVQSNLVKVNDPVWIKDKKST 13 K + D + +K + K+ + K + KKK+K+V + +LV P+W++ + Sbjct: 216 KEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKIKEVSHEWDLVNKQKPIWMRKPEEI 275
Query: 12 QKDK 1 K++ Sbjct: 276 NKEE 279
>sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1 Length = 699
Score = 30.4 bits (67), Expect = 2.8 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Frame = -2
Query: 177 KSMVDPTDTSKKTPRKAKI*Q-----PKYSRNKKKVKQVFVQSNLVKVNDPVWIKDKKST 13 K + D + +K + K+ + K + KKKVK+V + +LV P+W++ + Sbjct: 216 KEISDDEEEEEKKDEEGKVEEVDEEKEKEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEI 275
Query: 12 QKDK 1 K++ Sbjct: 276 TKEE 279
>sp|Q17VM4|PNP_HELAH Polyribonucleotide nucleotidyltransferase OS=Helicobacter acinonychis (strain Sheeba) GN=pnp PE=3 SV=1 Length = 688
Score = 30.4 bits (67), Expect = 2.8 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Frame = -3
Query: 389 FPRGIQQHLQVLLI---LDSELHKSQESKINLADKGKAKLELPPISTKDVISYASTSKNP 219 F RG Q L V ++ D++ H+S E K + ++ PP + S +TS+ Sbjct: 342 FTRGQTQSLVVGVLGTDNDAQTHESLEHKAPIKERFMFHYNFPPFCVGEASSIGATSRRE 401
Query: 218 HGSAFQASQAFKTS 177 G A +A +TS Sbjct: 402 LGHGNLAKRALETS 415
>sp|Q8Y339|ARGC_RALSO N-acetyl-gamma-glutamyl-phosphate reductase OS=Ralstonia solanacearum GN=argC PE=3 SV=1 Length = 337
Score = 30.4 bits (67), Expect = 2.8 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = -3
Query: 311 INLADKGKAKLELPPISTKDVISYASTSKNPHGSAFQASQAFKTSSQW---LTQLTPLRR 141 +N AD A L LP +++++ +S NP+ AS AF+TS W L +L P +R Sbjct: 48 LNAADV--AFLCLPDVASREAVSLVD---NPNTCIIDASTAFRTSDDWAYGLPELAPGQR 102
>sp|Q11178|YPC1_CAEEL Uncharacterized protein C05D10.1 OS=Caenorhabditis elegans GN=C05D10.1 PE=2 SV=2 Length = 529
Score = 29.6 bits (65), Expect = 4.9 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = -3
Query: 254 DVISYASTSKN--PHGSAFQASQAFKTSSQWLTQLTP 150 D++ Y + KN PHG F ASQA + Q++ + P Sbjct: 323 DLVDYMVSLKNSDPHGGHFTASQALHMARQYILERAP 359
>sp|P17121|SAC7_YEAST GTPase-activating protein SAC7 OS=Saccharomyces cerevisiae GN=SAC7 PE=1 SV=2 Length = 654
Score = 29.6 bits (65), Expect = 4.9 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -3
Query: 398 ILSFPRGIQQHLQVLLILDSELHKSQESKINLADKGKAK-LELPPISTKDVISYASTSKN 222 ++ + + HL L + + S E+K N DK K +E+P I++ D S++KN Sbjct: 385 LIEYSYKLLPHLLKLAKREQQERLSTENKKNNGDKQKTDPIEIPKITSSDSPPIVSSNKN 444
Query: 221 P 219 P Sbjct: 445 P 445
>sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3 Length = 952
Score = 29.3 bits (64), Expect = 6.3 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 3/89 (3%) Frame = -3
Query: 380 GIQQHLQVLLILDSELHKSQESKINLAD---KGKAKLELPPISTKDVISYASTSKNPHGS 210 GI L +L+ + + L++ + + + ++ +GK K + KD+ S+ H Sbjct: 830 GIASFLALLIFVANFLYEHKHTLFDDSENSFRGKLKFLVRNFDEKDIKSHMFKENAVHNV 889
Query: 209 AFQASQAFKTSSQWLTQLTPLRRHPEKQR 123 + +Q +SS Q TPL R PE+ R Sbjct: 890 SSPITQG--SSSPLTDQSTPLPRSPEQYR 916
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3E2G1 |
Definition |
tr|A3E2G1|A3E2G1_9EUGL Hsp90 (Fragment) OS=Entosiphon sulcatum |
Align length |
46 |
Score (bit) |
36.2 |
E-value |
0.85 |
Report |
|