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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917697
Clone id YMU001_000104_C11
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGAGCAGGTTATAATATTTAACTCAGTATGTGGCTGCCACTTCCAAAAAGGGTGTACCCC
AAGGTCACAATAACATGGGAAGAAAGGTCAAAATTAATGCCCATATAGTGGCAAAAGAAT
GATGGGTCCAACACCCTGTGACAAAATGTACACAAAAGAATCTGGTGATAATACAAAAGT
TGTTGCCCTCTGGCAATTACAATAGTTCCTGAACCCTTGGGGGAGAAATCAACCGTCGCA
TCTGCTTCCTGCAGCGCTGAAAAATGCTCGTATACAAATGGTCAAACCGCACACCAGCCC
TTTCTCGGTTAAGAATGAAGAAAATGTGATCACCTTCAATCAGAGTATAATACCACATTC
CTGGTTGCAAGGATTGGCCATCCTTGTAGTCAGGCCCCAATTAACAATGGGGATGAG
■■Homology search results ■■ -
sp_hit_id B0JIR2
Definition sp|B0JIR2|HCP_MICAN Hydroxylamine reductase OS=Microcystis aeruginosa (strain NIES-843)
Align length 41
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917697|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_C11.
         (417 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B0JIR2|HCP_MICAN Hydroxylamine reductase OS=Microcystis aerug...    31   2.2  
sp|O60103|YOX7_SCHPO Putative E3 ubiquitin-protein ligase C14F5....    30   2.9  
sp|Q8E1T5|SYGA_STRA5 Glycyl-tRNA synthetase alpha subunit OS=Str...    30   4.9  
sp|Q3K3B1|SYGA_STRA1 Glycyl-tRNA synthetase alpha subunit OS=Str...    30   4.9  
sp|P39057|DYHC_ANTCR Dynein beta chain, ciliary OS=Anthocidaris ...    30   4.9  
sp|Q5RC98|S38AA_PONAB Putative sodium-coupled neutral amino acid...    29   6.4  
sp|Q9HBR0|S38AA_HUMAN Putative sodium-coupled neutral amino acid...    29   6.4  
sp|Q68RU8|YCF1_PANGI Putative membrane protein ycf1 OS=Panax gin...    29   6.4  
sp|Q8CX31|SYGA_STRA3 Glycyl-tRNA synthetase alpha subunit OS=Str...    29   6.4  
sp|Q757K7|GPI18_ASHGO GPI mannosyltransferase 2 OS=Ashbya gossyp...    29   6.4  
sp|Q9CK01|RAPA_PASMU RNA polymerase-associated protein rapA OS=P...    29   8.4  

>sp|B0JIR2|HCP_MICAN Hydroxylamine reductase OS=Microcystis
           aeruginosa (strain NIES-843) GN=hcp PE=3 SV=1
          Length = 542

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 281 PFVYEHFSALQEADATVDFSPKGSGTIVIARGQQLLYYHQI 159
           P  Y H + L+  D  +DFSP      VIA+ Q LL + +I
Sbjct: 324 PVGYAHINRLETVDGAIDFSP------VIAKAQSLLGFTEI 358


>sp|O60103|YOX7_SCHPO Putative E3 ubiquitin-protein ligase C14F5.07
           OS=Schizosaccharomyces pombe GN=SPBC14F5.07 PE=1 SV=1
          Length = 1242

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -2

Query: 185 QQLLYYHQILLCTFCHRVLDPSFFCHYMGINFDL 84
           Q+++++ ++LL  FC  VL P  F H   +NF +
Sbjct: 87  QRVIFFTRVLLTFFCWTVLLPLIFKHVWNLNFKI 120


>sp|Q8E1T5|SYGA_STRA5 Glycyl-tRNA synthetase alpha subunit
           OS=Streptococcus agalactiae serotype V GN=glyQ PE=3 SV=1
          Length = 304

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
 Frame = +2

Query: 101 PYSGKRMMGPTPCDKMYTKES--------GDN-TKVVALWQLQ*FLNPWGRNQPSHLLPA 253
           PY+  R +GP P +  Y + S        G+N  ++    Q Q  + P     PS++   
Sbjct: 40  PYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKP----SPSNIQEL 95

Query: 254 ALKNARIQMVKP--HTSPFSVKNEENVITFNQSIIPHSWLQGLAI 382
            LK+  +  + P  H   F   N EN  T +  +    WL G+ I
Sbjct: 96  YLKSLELLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEI 140


>sp|Q3K3B1|SYGA_STRA1 Glycyl-tRNA synthetase alpha subunit
           OS=Streptococcus agalactiae serotype Ia GN=glyQ PE=3
           SV=1
          Length = 304

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
 Frame = +2

Query: 101 PYSGKRMMGPTPCDKMYTKES--------GDN-TKVVALWQLQ*FLNPWGRNQPSHLLPA 253
           PY+  R +GP P +  Y + S        G+N  ++    Q Q  + P     PS++   
Sbjct: 40  PYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKP----SPSNIQEL 95

Query: 254 ALKNARIQMVKP--HTSPFSVKNEENVITFNQSIIPHSWLQGLAI 382
            LK+  +  + P  H   F   N EN  T +  +    WL G+ I
Sbjct: 96  YLKSLELLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEI 140


>sp|P39057|DYHC_ANTCR Dynein beta chain, ciliary OS=Anthocidaris
           crassispina PE=1 SV=1
          Length = 4466

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +2

Query: 158 ESGDNTKVVALWQLQ*FLNPWGRNQPSHLLPAALKNAR-IQMVKPHTSPFSVKN-EENVI 331
           E  DN ++V        +NP G   PS+  P+ALKN + I  +K    P    N + N++
Sbjct: 45  EKADNPQLVFT------VNPAGLITPSYEFPSALKNTKAIYFIKKGREPVGKDNIKTNLV 98

Query: 332 TFNQSIIPHSWLQGLAILVVRPQL 403
             + S  P   L  L   V+ P L
Sbjct: 99  YGDLSYTPLEQLSALVDEVLVPLL 122


>sp|Q5RC98|S38AA_PONAB Putative sodium-coupled neutral amino acid
           transporter 10 OS=Pongo abelii GN=SLC38A10 PE=2 SV=1
          Length = 1121

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 11/45 (24%)
 Frame = -1

Query: 402 NWGLTTRMANP-----------CNQECGIIL*LKVITFSSFLTEK 301
           NWGL T + N            C ++CGI+L   ++ F S++T +
Sbjct: 8   NWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQ 52


>sp|Q9HBR0|S38AA_HUMAN Putative sodium-coupled neutral amino acid
           transporter 10 OS=Homo sapiens GN=SLC38A10 PE=1 SV=2
          Length = 1119

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 11/45 (24%)
 Frame = -1

Query: 402 NWGLTTRMANP-----------CNQECGIIL*LKVITFSSFLTEK 301
           NWGL T + N            C ++CGI+L   ++ F S++T +
Sbjct: 8   NWGLITNIVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWMTHQ 52


>sp|Q68RU8|YCF1_PANGI Putative membrane protein ycf1 OS=Panax
           ginseng GN=ycf1 PE=3 SV=1
          Length = 1919

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +3

Query: 18  LTQYVAATSKKGVPQGHNNMGRKVKINAHIVAKE*WVQHPVTKCTQKNLVIIQKLL 185
           L  Y    +K+   Q  NN+  KV+I       E W   P +K T+  L+IIQ +L
Sbjct: 821 LKDYTEEQTKRREKQEENNIKEKVRIEL----PEIWDLVPFSKTTRSLLLIIQSML 872


>sp|Q8CX31|SYGA_STRA3 Glycyl-tRNA synthetase alpha subunit
           OS=Streptococcus agalactiae serotype III GN=glyQ PE=3
           SV=1
          Length = 304

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
 Frame = +2

Query: 101 PYSGKRMMGPTPCDKMYTKES--------GDN-TKVVALWQLQ*FLNPWGRNQPSHLLPA 253
           PY+  R +GP P +  Y + S        G+N  ++    Q Q  + P     PS++   
Sbjct: 40  PYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKP----SPSNVQEL 95

Query: 254 ALKNARIQMVKP--HTSPFSVKNEENVITFNQSIIPHSWLQGLAI 382
            LK+  +  + P  H   F   N EN  T +  +    WL G+ I
Sbjct: 96  YLKSLELLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEI 140


>sp|Q757K7|GPI18_ASHGO GPI mannosyltransferase 2 OS=Ashbya gossypii
           GN=GPI18 PE=3 SV=1
          Length = 427

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 376 QSLQPGMWYYTLIEGDHIFFILN 308
           Q LQP  WY+ L+  D ++F+ N
Sbjct: 41  QPLQPEKWYHKLLSWDSVYFVKN 63
tr_hit_id A9RU77
Definition tr|A9RU77|A9RU77_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 86.3
E-value 7.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917697|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_C11.
         (417 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RU77|A9RU77_PHYPA Predicted protein OS=Physcomitrella paten...    86   7e-16
tr|B6UAB9|B6UAB9_MAIZE Lipase OS=Zea mays PE=2 SV=1                    81   3e-14
tr|Q6I575|Q6I575_ORYSJ Os05g0408300 protein OS=Oryza sativa subs...    79   9e-14
tr|A2Y4L2|A2Y4L2_ORYSI Putative uncharacterized protein OS=Oryza...    79   9e-14
tr|Q9SAC8|Q9SAC8_ARATH T16B5.12 protein (At1g10740) (Putative li...    79   1e-13
tr|A7R3D4|A7R3D4_VITVI Chromosome undetermined scaffold_504, who...    77   4e-13
tr|Q9LR26|Q9LR26_ARATH F26F24.20 OS=Arabidopsis thaliana GN=At1g...    75   2e-12
tr|Q8GXY1|Q8GXY1_ARATH Putative uncharacterized protein At1g2333...    75   2e-12
tr|B6THY3|B6THY3_MAIZE Lipase OS=Zea mays PE=2 SV=1                    71   3e-11
tr|Q9SGX6|Q9SGX6_ARATH F20B24.17 OS=Arabidopsis thaliana PE=4 SV=1     65   2e-09
tr|Q2SSK7|Q2SSK7_MYCCT ABC transporter, permease protein, putati...    34   4.1  
tr|B6G9N5|B6G9N5_9ACTN Putative uncharacterized protein OS=Colli...    33   9.2  

>tr|A9RU77|A9RU77_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_178181 PE=4 SV=1
          Length = 457

 Score = 86.3 bits (212), Expect = 7e-16
 Identities = 39/63 (61%), Positives = 49/63 (77%), Gaps = 3/63 (4%)
 Frame = -3

Query: 415 HPHC*LGPDY---KDGQSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRK 245
           H +C LG D    KDG+ LQPG+WYY+ +  DHI+FI+NRERAGV FD LY +IFQRCRK
Sbjct: 389 HSNCELGADLNDLKDGRVLQPGIWYYSTLVADHIYFIINRERAGVHFDVLYDNIFQRCRK 448

Query: 244 QMR 236
           Q++
Sbjct: 449 QIK 451


>tr|B6UAB9|B6UAB9_MAIZE Lipase OS=Zea mays PE=2 SV=1
          Length = 476

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 42/68 (61%), Positives = 47/68 (69%)
 Frame = -3

Query: 415 HPHC*LGPDYKDGQSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMR 236
           HPH  +  D  D   LQPG+WYY +IE DHI FI+NRERAGV+FD LY  IFQRCRK   
Sbjct: 405 HPHHFVVDD-SDCHPLQPGIWYYKIIEADHILFIVNRERAGVQFDLLYDGIFQRCRKHAF 463

Query: 235 RLISPPRV 212
           R  SPP V
Sbjct: 464 RK-SPPTV 470


>tr|Q6I575|Q6I575_ORYSJ Os05g0408300 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0014K18.6 PE=2 SV=1
          Length = 471

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 39/60 (65%), Positives = 43/60 (71%)
 Frame = -3

Query: 391 DYKDGQSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRRLISPPRV 212
           D  D   LQPG+WYY +IE DHI FI+NRERAGV+FD LY  IFQRCRK   R  SPP V
Sbjct: 405 DDSDCHPLQPGIWYYKIIEADHILFIVNRERAGVQFDLLYDGIFQRCRKHAFRR-SPPTV 463


>tr|A2Y4L2|A2Y4L2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19937 PE=4 SV=1
          Length = 471

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 39/60 (65%), Positives = 43/60 (71%)
 Frame = -3

Query: 391 DYKDGQSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRRLISPPRV 212
           D  D   LQPG+WYY +IE DHI FI+NRERAGV+FD LY  IFQRCRK   R  SPP V
Sbjct: 405 DDSDCHPLQPGIWYYKIIEADHILFIVNRERAGVQFDLLYDGIFQRCRKHAFRR-SPPTV 463


>tr|Q9SAC8|Q9SAC8_ARATH T16B5.12 protein (At1g10740) (Putative
           lipase) OS=Arabidopsis thaliana GN=At1g10740 PE=2 SV=1
          Length = 473

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -3

Query: 376 QSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRRLI 227
           Q+LQPG+WYY ++E DHI FI+NRERAGV+FD +Y SIFQRCRK + R I
Sbjct: 399 QTLQPGIWYYKIVEADHIMFIVNRERAGVQFDLIYDSIFQRCRKHVFRKI 448


>tr|A7R3D4|A7R3D4_VITVI Chromosome undetermined scaffold_504, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00013574001 PE=4 SV=1
          Length = 456

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = -3

Query: 376 QSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRRLISP 221
           Q LQPG+WYY ++E DH+ FI+NRERAGV+FD +Y SIF+RCRK + R   P
Sbjct: 395 QPLQPGIWYYKIVEADHVLFIVNRERAGVQFDLIYDSIFERCRKHVFRKTPP 446


>tr|Q9LR26|Q9LR26_ARATH F26F24.20 OS=Arabidopsis thaliana
           GN=At1g23330 PE=4 SV=1
          Length = 471

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = -3

Query: 370 LQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRR 233
           LQPG+WYY ++E DHI FI+NRERAGV FD +Y SIF+RCRK + R
Sbjct: 406 LQPGIWYYKIVEADHIMFIINRERAGVEFDLIYDSIFERCRKHVFR 451


>tr|Q8GXY1|Q8GXY1_ARATH Putative uncharacterized protein
           At1g23330/F26F24_16 (At1g23330) OS=Arabidopsis thaliana
           GN=At1g23330/F26F24_16 PE=2 SV=1
          Length = 231

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = -3

Query: 370 LQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRR 233
           LQPG+WYY ++E DHI FI+NRERAGV FD +Y SIF+RCRK + R
Sbjct: 166 LQPGIWYYKIVEADHIMFIINRERAGVEFDLIYDSIFERCRKHVFR 211


>tr|B6THY3|B6THY3_MAIZE Lipase OS=Zea mays PE=2 SV=1
          Length = 476

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = -3

Query: 415 HPHC*LGPDYKDGQSLQPGMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMR 236
           HP   +  D +D + L+PG+WYY ++E DH+ F++NR R GV+FD +Y SIF  CRK + 
Sbjct: 406 HPSVQVEKD-EDCRPLRPGIWYYKIVEADHMTFVINRRRGGVQFDLVYDSIFDNCRKHVF 464

Query: 235 RLISPP 218
           R   PP
Sbjct: 465 RTAPPP 470


>tr|Q9SGX6|Q9SGX6_ARATH F20B24.17 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 404

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
 Frame = -3

Query: 388 YKDGQSLQP---GMWYYTLIEGDHIFFILNRERAGVRFDHLYTSIFQRCRKQMRRLI 227
           +K  Q + P   G  YY ++E DHI FI+NRERAGV+FD +Y SIFQRCRK + R I
Sbjct: 323 WKFPQDVSPPYKGYRYYKIVEADHIMFIVNRERAGVQFDLIYDSIFQRCRKHVFRKI 379