BP917699 |
Clone id |
YMU001_000104_D01 |
Library |
YMU01 |
Length |
413 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_D01. |
Accession |
BP917699 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1823Contig1 |
Sequence |
TTTTTGAACAAGGTGAGTACATTGCATTCACATCAGTAAAGTAATTCCATGCTCCTTTAC CGAGTCTACGACAGCTAATAGTTTCCCCTCCAGCTTTTCATTCTTACGGGTGTAATACAA GGATGTAAACACATCAGCCTCCTTGGCACGCTCAGCCAGTACTTGGCCGACAATCCGACA GGCATTCAAGTCGCACCTTGACTTGAGCACTGATCGCAAGTCCTTAGAATTGGTGCTTGC CACAGCAACAACCTTGTTGGACATGCGATGCATAATGCTTGCGTGGATGTACTTCTTGGA AATGAATACATCAAGGGTAAATGGGAGCATGTATGCCTCTGTTCTATGCTTGAAAGACCT GATAGGCCGTCTCTCACCTTTTATCAGCTTAGACCTAGGCTTATCCACCTTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A9BG02 |
Definition |
sp|A9BG02|RL18_PETMO 50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) |
Align length |
91 |
Score (bit) |
60.1 |
E-value |
3.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SVY5 |
Definition |
tr|A9SVY5|A9SVY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
121 |
Score (bit) |
135.0 |
E-value |
1.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917699|Adiantum capillus-veneris mRNA, clone: YMU001_000104_D01. (413 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SVY5|A9SVY5_PHYPA Predicted protein OS=Physcomitrella paten... 135 1e-30 tr|B6TUI1|B6TUI1_MAIZE Structural constituent of ribosome OS=Zea... 134 3e-30 tr|A9TM44|A9TM44_PHYPA Predicted protein (Fragment) OS=Physcomit... 132 9e-30 tr|Q6ZGY5|Q6ZGY5_ORYSJ cDNA clone:J023132I06, full insert sequen... 131 1e-29 tr|A7QDQ1|A7QDQ1_VITVI Chromosome chr15 scaffold_82, whole genom... 131 1e-29 tr|A2X8G7|A2X8G7_ORYSI Putative uncharacterized protein OS=Oryza... 131 1e-29 tr|Q8GW22|Q8GW22_ARATH Putative uncharacterized protein (At1g088... 130 4e-29 tr|A9NZ46|A9NZ46_PICSI Putative uncharacterized protein OS=Picea... 128 1e-28 tr|A7QX13|A7QX13_VITVI Chromosome chr14 scaffold_211, whole geno... 127 4e-28 tr|Q8SB98|Q8SB98_ORYSA Putative uncharacterized protein OSJNBa00... 125 8e-28 tr|Q7XC72|Q7XC72_ORYSJ Os10g0559900 protein OS=Oryza sativa subs... 125 8e-28 tr|A2ZA70|A2ZA70_ORYSI Putative uncharacterized protein OS=Oryza... 125 8e-28 tr|Q9LJX6|Q9LJX6_ARATH Genomic DNA, chromosome 3, P1 clone:MAL21... 125 1e-27 tr|B4FUY5|B4FUY5_MAIZE Putative uncharacterized protein OS=Zea m... 122 9e-27 tr|B8LMX3|B8LMX3_PICSI Putative uncharacterized protein OS=Picea... 111 2e-23 tr|A7NWN3|A7NWN3_VITVI Chromosome chr5 scaffold_2, whole genome ... 93 6e-18 tr|Q9LJA1|Q9LJA1_ARATH Arabidopsis thaliana genomic DNA, chromos... 92 1e-17 tr|Q8LNU7|Q8LNU7_ORYSJ Putative uncharacterized protein OSJNBa00... 87 5e-16 tr|Q337J7|Q337J7_ORYSJ Os10g0484400 protein OS=Oryza sativa subs... 87 5e-16 tr|B8BHJ8|B8BHJ8_ORYSI Putative uncharacterized protein OS=Oryza... 87 5e-16 tr|B6TPY3|B6TPY3_MAIZE Putative uncharacterized protein OS=Zea m... 84 4e-15 tr|A9S9N7|A9S9N7_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|Q8LDK5|Q8LDK5_ARATH Putative uncharacterized protein (At5g278... 67 6e-10 tr|Q0DYI9|Q0DYI9_ORYSJ Os02g0689700 protein (Fragment) OS=Oryza ... 67 6e-10 tr|A5B7I1|A5B7I1_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-09 tr|Q1EHT9|Q1EHT9_ORYSJ cDNA clone:001-122-F11, full insert seque... 64 4e-09 tr|A2ZRE8|A2ZRE8_ORYSJ Putative uncharacterized protein OS=Oryza... 64 4e-09 tr|A2XXJ6|A2XXJ6_ORYSI Putative uncharacterized protein OS=Oryza... 64 5e-09 tr|B6SMG7|B6SMG7_MAIZE 50S ribosomal protein L18 OS=Zea mays PE=... 62 1e-08 tr|B5ZYV1|B5ZYV1_RHILW Ribosomal protein L18 OS=Rhizobium legumi... 60 5e-08
>tr|A9SVY5|A9SVY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_216270 PE=4 SV=1 Length = 196
Score = 135 bits (339), Expect = 1e-30 Identities = 67/121 (55%), Positives = 90/121 (74%) Frame = -3
Query: 396 RSKLIKGERRPIRSFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDL 217 RSK G+ + +S+K RTE Y PF LDVFIS KY+HA +MHR+++ VV+VA+TN+KDL Sbjct: 78 RSKGQPGKNK--KSWKQRTEKYFKPFILDVFISSKYVHAKVMHRVTSSVVSVATTNAKDL 135
Query: 216 RSVLKSRCDLNACRIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITL 37 R L S D NACR++GQ++AER+ E D++ + RKNEKLEGKL V+DS EHG+TL Sbjct: 136 RLSLPSLSDANACRLIGQLIAERSIEQDIYAVAFDLRKNEKLEGKLAIVIDSAIEHGLTL 195
Query: 36 L 34 + Sbjct: 196 V 196
>tr|B6TUI1|B6TUI1_MAIZE Structural constituent of ribosome OS=Zea mays PE=2 SV=1 Length = 189
Score = 134 bits (336), Expect = 3e-30 Identities = 64/114 (56%), Positives = 89/114 (78%), Gaps = 1/114 (0%) Frame = -3
Query: 381 KGERRPIR-SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVL 205 + E+RP R S+K RT+ YM PF L+VF SK+++HA +MHR ++KV+AVA+TNSKDLR L Sbjct: 73 EAEQRPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNSKDLRLTL 132
Query: 204 KSRCDLNACRIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 S D NACR +G+++AER+ +ADVF Y +KNE++EGKL V+D++KEHGI Sbjct: 133 PSLVDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEHGI 186
>tr|A9TM44|A9TM44_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48641 PE=4 SV=1 Length = 118
Score = 132 bits (332), Expect = 9e-30 Identities = 64/108 (59%), Positives = 86/108 (79%) Frame = -3
Query: 360 RSFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVLKSRCDLNA 181 +SFK RTE + PF+LDVF+S KYIHAS+MHR+++KVVAV STN+K+ R+ LKS D A Sbjct: 11 KSFKLRTEKCLRPFSLDVFLSGKYIHASVMHRVTSKVVAVCSTNAKEFRNNLKSYKDFTA 70
Query: 180 CRIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITL 37 C++VG+ LA+RAKEADVFT +Y RK EK EG+L AVV ++++ GI + Sbjct: 71 CKVVGETLAQRAKEADVFTVVYEPRKGEKFEGRLAAVVHTIEDSGINV 118
>tr|Q6ZGY5|Q6ZGY5_ORYSJ cDNA clone:J023132I06, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1743_B12.26 PE=2 SV=1 Length = 181
Score = 131 bits (330), Expect = 1e-29 Identities = 62/114 (54%), Positives = 89/114 (78%), Gaps = 1/114 (0%) Frame = -3
Query: 381 KGERRPIR-SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVL 205 + E RP R S+K RT+ YM PF L+VF SK+++HA ++HR ++KV++VASTN+KDLR+ L Sbjct: 65 EAEERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNAKDLRTTL 124
Query: 204 KSRCDLNACRIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 S D NACR +G+++AER+ +ADVF Y +KNE++EGKL V+D++KEHGI Sbjct: 125 PSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 178
>tr|A7QDQ1|A7QDQ1_VITVI Chromosome chr15 scaffold_82, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036689001 PE=4 SV=1 Length = 183
Score = 131 bits (330), Expect = 1e-29 Identities = 62/118 (52%), Positives = 91/118 (77%) Frame = -3
Query: 396 RSKLIKGERRPIRSFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDL 217 RS+ +R +S+K +T+ YM PF L+VF SK++IHA +MHR ++KV++VA+TNSKDL Sbjct: 63 RSRSEAAKRPSRKSWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDL 122
Query: 216 RSVLKSRCDLNACRIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 R+ L S D NACR++G+++AER+ EADVF Y RK+E++EGKL V+D++KE+GI Sbjct: 123 RNTLSSLTDHNACRVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGI 180
>tr|A2X8G7|A2X8G7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08528 PE=4 SV=1 Length = 181
Score = 131 bits (330), Expect = 1e-29 Identities = 62/114 (54%), Positives = 89/114 (78%), Gaps = 1/114 (0%) Frame = -3
Query: 381 KGERRPIR-SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVL 205 + E RP R S+K RT+ YM PF L+VF SK+++HA ++HR ++KV++VASTN+KDLR+ L Sbjct: 65 EAEERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNAKDLRTTL 124
Query: 204 KSRCDLNACRIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 S D NACR +G+++AER+ +ADVF Y +KNE++EGKL V+D++KEHGI Sbjct: 125 PSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 178
>tr|Q8GW22|Q8GW22_ARATH Putative uncharacterized protein (At1g08850) OS=Arabidopsis thaliana GN=At1g08845 PE=2 SV=1 Length = 189
Score = 130 bits (326), Expect = 4e-29 Identities = 62/105 (59%), Positives = 85/105 (80%) Frame = -3
Query: 357 SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVLKSRCDLNAC 178 SFK RT AYM PFTLDVFISK+++ AS+ HR++ + VAVA TNSKD+++VL+SRCD+ AC Sbjct: 78 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTNSKDVKAVLRSRCDIPAC 137
Query: 177 RIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +G++L+ERAKEADV+T+ Y R +K EGK+ AVV S+ ++GI Sbjct: 138 MSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDNGI 182
>tr|A9NZ46|A9NZ46_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 186
Score = 128 bits (322), Expect = 1e-28 Identities = 60/107 (56%), Positives = 87/107 (81%) Frame = -3
Query: 357 SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVLKSRCDLNAC 178 SFK RT AYM PFTLDVFISK+++ ASI HR+++K VAVA TNSKD+++ L+S+ D+ AC Sbjct: 75 SFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPAC 134
Query: 177 RIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITL 37 +G++LAER++EADV+T++Y R+ +K EGK+ AVV S+ ++GI + Sbjct: 135 LAIGRILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDI 181
>tr|A7QX13|A7QX13_VITVI Chromosome chr14 scaffold_211, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008905001 PE=4 SV=1 Length = 212
Score = 127 bits (318), Expect = 4e-28 Identities = 61/105 (58%), Positives = 84/105 (80%) Frame = -3
Query: 357 SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVLKSRCDLNAC 178 SFK RT AYM PFTLDV ISK+++ AS+ HR+++K VAVA TNSKD+++VLKSR D+ AC Sbjct: 101 SFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSDIPAC 160
Query: 177 RIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGI 43 +G++L+ERA+EADV+T+ Y R +K EGK+ AVV S+ ++GI Sbjct: 161 LAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNGI 205
>tr|Q8SB98|Q8SB98_ORYSA Putative uncharacterized protein OSJNBa0042H09.18 OS=Oryza sativa GN=OSJNBa0042H09.18 PE=4 SV=1 Length = 187
Score = 125 bits (315), Expect = 8e-28 Identities = 63/107 (58%), Positives = 82/107 (76%) Frame = -3
Query: 357 SFKHRTEAYMLPFTLDVFISKKYIHASIMHRMSNKVVAVASTNSKDLRSVLKSRCDLNAC 178 SFK RT AYM PFTLDVFISK+++ AS+ HR + + VAVA TNSKD+++ LKSR D+ AC Sbjct: 76 SFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPAC 135
Query: 177 RIVGQVLAERAKEADVFTSLYYTRKNEKLEGKLLAVVDSVKEHGITL 37 VG+ LAERAKEADV+T Y R+ +K EGK+ AVV S+ ++GI + Sbjct: 136 LAVGRFLAERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINV 182
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