| BP917701 |
| Clone id |
YMU001_000104_D03 |
| Library |
YMU01 |
| Length |
332 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_D03. |
| Accession |
BP917701 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GCCGCATAGGGATTGACATGCTTTGACTCGTTGGAACCTCCTTGTCTGCACAGTAGGAAG CGCACAAGAGCTAGTAGTAGCAGAAGGAAGAATCCTCCAATGACAGTGCCTGCAATGGCT CCTGCTGACAGTTTCCTGTGATGCTTCCTAGGAGCTGCTGGAGACGAGGTTGGCGAAGAA GCCGGAGCCCCTGGCTCACCCGGACATTCAACTTGCAAAGGAAAGCCGCACAGGTCGTTC CCGCCAAATGCACCCACATCCAGTCTTCTGAAAGTGGTGGTGACTGGAATCGGACCTGAG AGATTGTTATTCGCGACACTAAAGTTGGTCAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9LP77 |
| Definition |
sp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana |
| Align length |
115 |
| Score (bit) |
48.1 |
| E-value |
1.0e-05 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9T5W9 |
| Definition |
tr|A9T5W9|A9T5W9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
| Align length |
85 |
| Score (bit) |
57.8 |
| E-value |
3.0e-07 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917701|Adiantum capillus-veneris mRNA, clone: YMU001_000104_D03. (332 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T5W9|A9T5W9_PHYPA Predicted protein (Fragment) OS=Physcomit... 58 3e-07 tr|A7PRC9|A7PRC9_VITVI Chromosome chr14 scaffold_26, whole genom... 49 1e-04 tr|A5AII8|A5AII8_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|A9RDS5|A9RDS5_PHYPA Predicted protein OS=Physcomitrella paten... 49 1e-04 tr|B5X571|B5X571_ARATH At1g48480 OS=Arabidopsis thaliana PE=2 SV=1 48 2e-04 tr|A9T5W8|A9T5W8_PHYPA Predicted protein (Fragment) OS=Physcomit... 48 3e-04 tr|B7SWJ0|B7SWJ0_9ROSA M18S-3Ap OS=Malus floribunda PE=4 SV=1 47 4e-04 tr|A9SUU4|A9SUU4_PHYPA Predicted protein (Fragment) OS=Physcomit... 47 4e-04 tr|A9SBY2|A9SBY2_PHYPA Predicted protein OS=Physcomitrella paten... 47 4e-04 tr|B7SWJ6|B7SWJ6_9ROSA HB06p OS=Malus floribunda PE=4 SV=1 46 8e-04 tr|A9T7K5|A9T7K5_PHYPA Predicted protein OS=Physcomitrella paten... 46 8e-04 tr|B7SWJ1|B7SWJ1_9ROSA AL07-2p OS=Malus floribunda PE=4 SV=1 45 0.001 tr|A9TI46|A9TI46_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.001 tr|A9S0C4|A9S0C4_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.001 tr|A9RDS4|A9RDS4_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|Q949G8|Q949G8_9ROSA HcrVf2 protein OS=Malus floribunda GN=hcr... 44 0.003 tr|B7SWJ7|B7SWJ7_9ROSA HB09p OS=Malus floribunda PE=4 SV=1 44 0.003 tr|B7SWJ5|B7SWJ5_9ROSA M18S-3Cp OS=Malus floribunda PE=4 SV=1 44 0.003 tr|B7SWI9|B7SWI9_9ROSA HB03p OS=Malus floribunda PE=4 SV=1 44 0.003 tr|A7QQ00|A7QQ00_VITVI Chromosome undetermined scaffold_139, who... 44 0.003 tr|A5ADQ7|A5ADQ7_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|Q9AUQ7|Q9AUQ7_ORYSA Putative receptor kinase OS=Oryza sativa ... 44 0.004 tr|Q2QYS6|Q2QYS6_ORYSJ Os12g0107700 protein OS=Oryza sativa subs... 44 0.004 tr|Q10E02|Q10E02_ORYSJ Atypical receptor-like kinase MARK, putat... 44 0.004 tr|B8AQD9|B8AQD9_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004 tr|B7SWJ4|B7SWJ4_9ROSA M18-S3Bp OS=Malus floribunda PE=4 SV=1 44 0.004 tr|B7SWJ2|B7SWJ2_9ROSA HB04p OS=Malus floribunda PE=4 SV=1 44 0.004 tr|A9TAP0|A9TAP0_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.004 tr|A2ZHB1|A2ZHB1_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004 tr|Q75GM0|Q75GM0_ORYSJ Os05g0480400 protein OS=Oryza sativa subs... 44 0.005
>tr|A9T5W9|A9T5W9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_41819 PE=4 SV=1 Length = 591
Score = 57.8 bits (138), Expect = 3e-07 Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 5/85 (5%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGN-DLCGFPLQVECPG----EPGXXXXXXX 168 LT F+VANNNLSGP+P TT + ++ GN LCGFPL+ CP PG Sbjct: 164 LTIFNVANNNLSGPVP--TTLSKFPAASYLGNPGLCGFPLESVCPSPIAPSPGPIAVSTE 221
Query: 167 XXXXXPRKHHRKLSAGAIAGTVIGG 93 K LS GA+AG V+GG Sbjct: 222 VAKEGGDK---PLSTGAVAGIVVGG 243
>tr|A7PRC9|A7PRC9_VITVI Chromosome chr14 scaffold_26, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022446001 PE=4 SV=1 Length = 639
Score = 49.3 bits (116), Expect = 1e-04 Identities = 36/103 (34%), Positives = 43/103 (41%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGNDLCGFPLQVECPGEPGXXXXXXXXXXXX 153 L F+V+NN L G IP + AF GN LCG PLQ CP Sbjct: 184 LQQFNVSNNQLDGSIP--SKLSNFPATAFQGNSLCGGPLQ-SCP---------------- 224
Query: 152 PRKHHRKLSAGAIAGTVIGGXXXXXXXXXXXXXLCRQGGSNES 24 H KLS GAIAG +IG LCR+ S ++ Sbjct: 225 ---HKSKLSGGAIAGIIIGSVVAFVLILVVLILLCRKKSSKKT 264
>tr|A5AII8|A5AII8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018964 PE=4 SV=1 Length = 639
Score = 49.3 bits (116), Expect = 1e-04 Identities = 36/103 (34%), Positives = 43/103 (41%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGNDLCGFPLQVECPGEPGXXXXXXXXXXXX 153 L F+V+NN L G IP + AF GN LCG PLQ CP Sbjct: 184 LQQFNVSNNQLDGSIP--SKLSNFPATAFQGNSLCGGPLQ-SCP---------------- 224
Query: 152 PRKHHRKLSAGAIAGTVIGGXXXXXXXXXXXXXLCRQGGSNES 24 H KLS GAIAG +IG LCR+ S ++ Sbjct: 225 ---HKSKLSGGAIAGIIIGSVVAFVLILVVLILLCRKKSSKKT 264
>tr|A9RDS5|A9RDS5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158630 PE=4 SV=1 Length = 647
Score = 48.9 bits (115), Expect = 1e-04 Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGN-DLCGFPLQVECPGEPGXXXXXXXXXXX 156 LT F VANNNLSG +P T R ++ GN LCG PL C P Sbjct: 181 LTVFDVANNNLSGAVP--PTLSRFPADSYVGNAGLCGPPLASPCLVAP---------EGT 229
Query: 155 XPRKHHRKLSAGAIAGTVIGG 93 +KLSAGAI+G V+GG Sbjct: 230 AKSSSEKKLSAGAISGIVLGG 250
>tr|B5X571|B5X571_ARATH At1g48480 OS=Arabidopsis thaliana PE=2 SV=1 Length = 655
Score = 48.1 bits (113), Expect = 2e-04 Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 8/115 (6%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGNDLCGFPLQVECPGEP--------GXXXX 177 L F+V+NN+L+G IP +R + +F LCG PL++ CP E G Sbjct: 192 LVQFNVSNNSLNGSIP--KNLQRFESDSFLQTSLCGKPLKL-CPDEETVPSQPTSGGNRT 248
Query: 176 XXXXXXXXPRKHHRKLSAGAIAGTVIGGXXXXXXXXXXXXXLCRQGGSNESKHVN 12 +K KLS GAIAG VIG LCR+ + S+ V+ Sbjct: 249 PPSVEGSEEKKKKNKLSGGAIAGIVIGCVVGFALIVLILMVLCRKKSNKRSRAVD 303
>tr|A9T5W8|A9T5W8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_41802 PE=4 SV=1 Length = 609
Score = 47.8 bits (112), Expect = 3e-04 Identities = 35/82 (42%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGN-DLCGFPLQVECP-GEPGXXXXXXXXXX 159 LT F VANNNLSGPIP + + V +F GN L G PL CP PG Sbjct: 183 LTVFDVANNNLSGPIPESLSM--FPVASFLGNPGLSGCPLDGACPSASPG-------PLV 233
Query: 158 XXPRKHHRKLSAGAIAGTVIGG 93 P ++LS GAI G ++GG Sbjct: 234 SSPASGSKRLSVGAIVGIILGG 255
>tr|B7SWJ0|B7SWJ0_9ROSA M18S-3Ap OS=Malus floribunda PE=4 SV=1 Length = 1045
Score = 47.4 bits (111), Expect = 4e-04 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGNDLCGFPLQVEC 204 L++ +++NNNL+G IP +T + LD +F GN+LCG PL C Sbjct: 928 LSHLNLSNNNLTGRIPKSTQLQSLDQSSFVGNELCGAPLNKNC 970
>tr|A9SUU4|A9SUU4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_12077 PE=4 SV=1 Length = 607
Score = 47.4 bits (111), Expect = 4e-04 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = -1
Query: 323 FSVANNNLSGPIPVTTTFRRLDVGAFGGN-DLCGFPLQVECPGEPGXXXXXXXXXXXXPR 147 F VANNNLSG IP + + + ++ GN L G PL+ CP Sbjct: 179 FDVANNNLSGQIPASLS--KFPASSYHGNPGLSGCPLESACPSSVAPITAPSPLVSSPQA 236
Query: 146 KHHRKLSAGAIAGTVIGGXXXXXXXXXXXXXLCRQ 42 + LS GAIAG V+GG LCR+ Sbjct: 237 PRGKLLSVGAIAGIVVGGVLFLVLVASFLLFLCRR 271
>tr|A9SBY2|A9SBY2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_183239 PE=4 SV=1 Length = 796
Score = 47.4 bits (111), Expect = 4e-04 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGND-LCGFPLQVECPGE 195 LT+F+V+ N+LSG IP+ +F R D ++ GN+ LCG PL V C E Sbjct: 369 LTSFNVSYNSLSGRIPIANSFARFDNSSYLGNEGLCGPPLSVRCGSE 415
>tr|B7SWJ6|B7SWJ6_9ROSA HB06p OS=Malus floribunda PE=4 SV=1 Length = 965
Score = 46.2 bits (108), Expect = 8e-04 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = -1
Query: 332 LTNFSVANNNLSGPIPVTTTFRRLDVGAFGGNDLCGFPLQVEC 204 L++ +V+ NNL+G IP +T + LD +F GN+LCG PL C Sbjct: 853 LSHLNVSYNNLTGEIPKSTQLQSLDQSSFIGNELCGAPLNTNC 895
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