BP917706
Clone id YMU001_000104_D09
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACTCCTATAAGACACTATGGCTCGTTTGGGTGGCCTGAGCTCTGAGGCCTTCTCTCCTC
CTGCTGGCCTGGGCAGTATTTTGCGAGACCAAAAAGTGTTACCTGGGGTGAGAAGCAGCC
GATCAAATGTGGTTTTCGGCATGGTTAGGCCTCCCATCACACAATCAGTCTCTGTGTCCT
CATCTCTGAAGGATTCTTTTCTTATTGATGTTGGGACAGCTGAGGAGTCAGATGACCTGA
AGGAGGAAGACATTTGGGGCATGGATGACACTATAGAGAGTGCTGGCTCCATGACAGATT
TTGAGAAGCACAGGATGAGCGCTGCGGATGAGTTAAGTTTGGGGATTTCACCGAACGGGA
TGGCTAATTCTGTAATGGAGGAGCTAGGTTTTGGTATTGGCTCGGCAAGGAATGACTATG
CAGACAATGCCAAGCCTGCAAAGCAATTAGAAAAAGCATATGGTGCAGCAGATGCTTTTG
TGAGCAGTGGAGCAATTGGTTCCTCTCTCCTC
■■Homology search results ■■ -
sp_hit_id Q875B6
Definition sp|Q875B6|SQS1_PODAN Protein SQS1 OS=Podospora anserina
Align length 78
Score (bit) 32.3
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917706|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_D09.
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q875B6|SQS1_PODAN Protein SQS1 OS=Podospora anserina GN=SQS1 ... 32 1.3
sp|A7GQZ8|HUTI_BACCN Imidazolonepropionase OS=Bacillus cereus su... 30 8.5
sp|A7F4L5|DRS1_SCLS1 ATP-dependent RNA helicase drs1 OS=Scleroti... 30 8.5
sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergil... 30 8.5

>sp|Q875B6|SQS1_PODAN Protein SQS1 OS=Podospora anserina GN=SQS1
PE=3 SV=1
Length = 718

Score = 32.3 bits (72), Expect = 1.3
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +3

Query: 192 DSFLIDVGTAEESDDLKEEDIWGMDDTIESAGS-MTDF------EKHRMSAADELSLGIS 350
D+F +++G+ +E+D ED+ G + ES+GS ++D E D++ +
Sbjct: 339 DNFALNLGSGDENDMPVVEDLSGDEQQAESSGSGLSDADEDNGDENDEADEDDDMDADMD 398

Query: 351 PNGMANSVMEELGFGIGS 404
G+A + ++ G+GS
Sbjct: 399 DEGLARLLAKQEELGLGS 416


>sp|A7GQZ8|HUTI_BACCN Imidazolonepropionase OS=Bacillus cereus
subsp. cytotoxis (strain NVH 391-98) GN=hutI PE=3 SV=1
Length = 423

Score = 29.6 bits (65), Expect = 8.5
Identities = 26/102 (25%), Positives = 44/102 (43%)
Frame = +3

Query: 186 LKDSFLIDVGTAEESDDLKEEDIWGMDDTIESAGSMTDFEKHRMSAADELSLGISPNGMA 365
+KD ++ VGTAEE+ L+ +I + + S G + + E + + G+
Sbjct: 40 IKDGVIMFVGTAEEAKGLQAREIIDCEGKVVSPGLVDPHTHLVFGGSRENEIALKLQGVP 99

Query: 366 NSVMEELGFGIGSARNDYADNAKPAKQLEKAYGAADAFVSSG 491
+ E G GI S N A + ++KA D +S G
Sbjct: 100 YLEILEQGGGILSTVN-ATKKASKEELVKKANFHLDRMLSFG 140


>sp|A7F4L5|DRS1_SCLS1 ATP-dependent RNA helicase drs1 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=drs1
PE=3 SV=1
Length = 801

Score = 29.6 bits (65), Expect = 8.5
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3

Query: 225 ESDDLKEEDIWGMDDTIESAGSMTDFEKHRMSAADELSLGISPNGMANSVMEEL-GFGIG 401
E +D++EE+IWG+ D + A +DFE + +G + +EE G+G
Sbjct: 61 EDEDVEEEEIWGIKDADDGAMD-SDFE-----------FALEADGKGGADLEEFEGWGFD 108

Query: 402 SARNDYADNAKPAKQLEK 455
A+ K A +++
Sbjct: 109 GAKKGLNGGDKKAVDIDE 126


>sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergillus
oryzae GN=drs1 PE=3 SV=2
Length = 820

Score = 29.6 bits (65), Expect = 8.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3

Query: 186 LKDSFLIDVGTAEESDDLKEEDIWGMDDTIESA 284
L F DVG A + D ++ D WG+D+T + A
Sbjct: 104 LNSDFEFDVGAAAQKDVVEGFDGWGLDETKDGA 136


tr_hit_id A4SEE7
Definition tr|A4SEE7|A4SEE7_PROVI 4Fe-4S ferredoxin, iron-sulfur binding domain protein OS=Prosthecochloris vibrioformis (strain DSM 265)
Align length 41
Score (bit) 36.2
E-value 0.96
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917706|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_D09.
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4SEE7|A4SEE7_PROVI 4Fe-4S ferredoxin, iron-sulfur binding do... 36 0.96
tr|A7M550|A7M550_BACOV Putative uncharacterized protein OS=Bacte... 35 2.1
tr|Q3B3V8|Q3B3V8_PELLD Hydrogenase, iron-sulfur binding protein,... 34 3.7
tr|Q64PJ3|Q64PJ3_BACFR Putative uncharacterized protein OS=Bacte... 34 4.8
tr|Q55C81|Q55C81_DICDI Putative uncharacterized protein OS=Dicty... 34 4.8
tr|B6KB05|B6KB05_TOXGO Putative uncharacterized protein OS=Toxop... 34 4.8
tr|B0MDA7|B0MDA7_9FIRM Putative uncharacterized protein OS=Anaer... 33 6.2
tr|B7Q6I3|B7Q6I3_IXOSC Putative uncharacterized protein OS=Ixode... 33 6.2
tr|A7APR7|A7APR7_BABBO WD domain, G-beta repeat domain containin... 33 8.1

>tr|A4SEE7|A4SEE7_PROVI 4Fe-4S ferredoxin, iron-sulfur binding
domain protein OS=Prosthecochloris vibrioformis (strain
DSM 265) GN=Cvib_0841 PE=4 SV=1
Length = 276

Score = 36.2 bits (82), Expect = 0.96
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2

Query: 386 RFWYWLGKE*LCRQCQACKAIRKSIWCSRCFCE----QWSN 496
RF +W G+ C +C AC+A WC RC + QW N
Sbjct: 155 RFSFWEGEFSRCIKCYACRAACPMCWCRRCVVDNNQPQWVN 195


>tr|A7M550|A7M550_BACOV Putative uncharacterized protein
OS=Bacteroides ovatus ATCC 8483 GN=BACOVA_05244 PE=4
SV=1
Length = 266

Score = 35.0 bits (79), Expect = 2.1
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2

Query: 386 RFWYWLGKE*LCRQCQACKAIRKSIWCSRCF----CEQWSNWFLSP 511
R+ YW+ + C +C AC+A +CSRC C QW + +P
Sbjct: 145 RWKYWMEEMSKCIKCYACRAACPLCYCSRCIVEVNCPQWVQPWSAP 190


>tr|Q3B3V8|Q3B3V8_PELLD Hydrogenase, iron-sulfur binding protein,
putative OS=Pelodictyon luteolum (strain DSM 273)
GN=Plut_1111 PE=4 SV=1
Length = 276

Score = 34.3 bits (77), Expect = 3.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +2

Query: 386 RFWYWLGKE*LCRQCQACKAIRKSIWCSRCFCE----QWSN 496
RF +W G+ C +C AC+ WC RC + QW N
Sbjct: 155 RFSFWEGEFSRCIKCYACRQACPMCWCRRCVVDNNQPQWVN 195


>tr|Q64PJ3|Q64PJ3_BACFR Putative uncharacterized protein
OS=Bacteroides fragilis GN=BF3846 PE=4 SV=1
Length = 335

Score = 33.9 bits (76), Expect = 4.8
Identities = 24/104 (23%), Positives = 48/104 (46%)
Frame = +3

Query: 195 SFLIDVGTAEESDDLKEEDIWGMDDTIESAGSMTDFEKHRMSAADELSLGISPNGMANSV 374
SF + ++++D + + +WG +++ GS TD+E A + ++ +S + + +
Sbjct: 130 SFTVKADQSKDADYIASDLLWGQPMKLKT-GSTTDYEPANPVARTKENVPVSFKHLLSKI 188

Query: 375 MEELGFGIGSARNDYADNAKPAKQLEKAYGAADAFVSSGAIGSS 506
EL G G ND+ + + +SSGAI S+
Sbjct: 189 EIELVAGDGLVTNDFRSSTLTVMNTQP---GTSLTLSSGAISSA 229


>tr|Q55C81|Q55C81_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0190861 PE=4 SV=1
Length = 1359

Score = 33.9 bits (76), Expect = 4.8
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -3

Query: 423 LHSHSLPSQYQNLAPPLQN*PSRSVKSPNLTHPQRS 316
LH +LPS + NL PP+ PS+S S NL+ P S
Sbjct: 177 LHPPTLPSHHYNLTPPIT--PSKSPNSSNLSSPNSS 210


>tr|B6KB05|B6KB05_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_057550 PE=4 SV=1
Length = 1141

Score = 33.9 bits (76), Expect = 4.8
Identities = 27/81 (33%), Positives = 34/81 (41%)
Frame = +3

Query: 264 DDTIESAGSMTDFEKHRMSAADELSLGISPNGMANSVMEELGFGIGSARNDYADNAKPAK 443
D T SAG TD +RM+ A E L N LG + S R + +DN+
Sbjct: 602 DSTDTSAGQSTDRLANRMTPASETFLAAGANAA-------LGSRVDSPRGEASDNSAALG 654

Query: 444 QLEKAYGAADAFVSSGAIGSS 506
Q KA SSG G+S
Sbjct: 655 QSWKAAVRTSQAASSGVGGTS 675


>tr|B0MDA7|B0MDA7_9FIRM Putative uncharacterized protein
OS=Anaerostipes caccae DSM 14662 GN=ANACAC_01550 PE=4
SV=1
Length = 196

Score = 33.5 bits (75), Expect = 6.2
Identities = 28/91 (30%), Positives = 40/91 (43%)
Frame = +3

Query: 240 KEEDIWGMDDTIESAGSMTDFEKHRMSAADELSLGISPNGMANSVMEELGFGIGSARNDY 419
+EED WG+ + EKH A + L G M SV G+GI S
Sbjct: 45 QEEDYWGITGLLHDIDFELYPEKHCQKAPELLRAGGIGEDMIRSVCSH-GYGICS----- 98

Query: 420 ADNAKPAKQLEKAYGAADAFVSSGAIGSSLL 512
+ +P ++EK AAD +G IG++ L
Sbjct: 99 --DVRPEHEMEKVLFAADEL--TGLIGAAAL 125


>tr|B7Q6I3|B7Q6I3_IXOSC Putative uncharacterized protein OS=Ixodes
scapularis GN=IscW_ISCW010342 PE=4 SV=1
Length = 510

Score = 33.5 bits (75), Expect = 6.2
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Frame = -3

Query: 510 GERNQLLHCSQKHLLHHMLFLIALQAWHCLHSHSLPSQYQNLAPPLQN*PSRSVKSPNL- 334
GER L H +HLL C +P + L PLQ S K P L
Sbjct: 108 GERMPLRHIRHQHLLG------------CRQPPPVPVGPRTLETPLQGFVSLVNKHPTLP 155

Query: 333 ---------THPQRSSCASQNLSW 289
THP +S+CA +L+W
Sbjct: 156 FKNIFATISTHPNQSTCAEGHLTW 179


>tr|A7APR7|A7APR7_BABBO WD domain, G-beta repeat domain containing
protein OS=Babesia bovis GN=BBOV_III009950 PE=4 SV=1
Length = 1266

Score = 33.1 bits (74), Expect = 8.1
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3

Query: 249 DIWGMDDTIESAGSMTDFEKHRMSAADE-LSLGISPNGMANSVMEELGFGI 398
D+WG D IESA SM +E R +A D +G+SP N E+ +
Sbjct: 961 DVWGSIDEIESAESMEVYESEREAAVDTGPPIGLSPLDYINMGESEVALDL 1011