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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917708
Clone id YMU001_000104_D11
Library
Length 459
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAAGGCGTCTCTCCTAGCTACACAGTGCCCCCCCCTCCACAAGTTGGGTCTCAGCAGAGT
TATAGCCAACAACCACCATATGCTGGGTGGCAAGCCCACCAGCAAAATGCTCCACCAGCA
TATTACAATAATGCTCCACCAGCAAATATGCCACAGCCGCCAGGGCCCCCCCAACTTCCT
TACTCCTATCAGCCTGCCCCTTCGACCGCACCATACTACCAACCATCCCATGGAAGCTAC
TACAGATAGATATTAAATTGTTTTCACCTATTAAGAAGAGGTGCAATGTAAAATATTGTT
CTATTCCGGCTATGTGCTACGTTATTTGAATCTCACTTTTGTAAAAAAATCTAATAGGAA
GCTATACAAGTTATTAGTTGTTACTTCTTGCAACTAACACCCTGGCCATCTTCATGCATA
TGTAAGCATAACGTGCACACAAATTAGTGCTCATGCCCT
■■Homology search results ■■ -
sp_hit_id Q8K1L0
Definition sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 OS=Mus musculus
Align length 59
Score (bit) 33.9
E-value 0.35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917708|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_D11.
         (459 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    34   0.35 
sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5 ...    33   0.59 
sp|P24064|CLPP_WHEAT ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|A1E9U9|CLPP_SORBI ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|Q6ENT9|CLPP_SACOF ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|Q6L377|CLPP_SACHY ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|P0C314|CLPP_ORYSJ ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|P0C313|CLPP_ORYSI ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|P0C312|CLPP_ORYSA ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|Q6ENE9|CLPP_ORYNI ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|P26567|CLPP_MAIZE ATP-dependent Clp protease proteolytic subu...    31   2.9  
sp|A1EA33|CLPP_AGRST ATP-dependent Clp protease proteolytic subu...    30   5.0  
sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g5830...    29   8.6  

>sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5
           OS=Mus musculus GN=Creb5 PE=2 SV=3
          Length = 357

 Score = 33.9 bits (76), Expect = 0.35
 Identities = 21/59 (35%), Positives = 24/59 (40%)
 Frame = +2

Query: 53  SRVIANNHHMLGGKPTSKMLHQHITIMLHQQICHSRQGPPNFLTPISLPLRPHHTTNHP 229
           SR     HH L   P     HQH T+  H    H  Q P +   P     +PHH  NHP
Sbjct: 113 SRQDQTPHHHLHSHP-----HQHQTLPPHHPYPHQHQHPAHHPHP-----QPHHQQNHP 161


>sp|Q02930|CREB5_HUMAN cAMP-responsive element-binding protein 5
           OS=Homo sapiens GN=CREB5 PE=1 SV=2
          Length = 508

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = +2

Query: 53  SRVIANNHHMLGGKPTSKMLHQHITIMLHQQICHSRQGPPNFLTPISLPLRPHHTTNHP 229
           SR     HH +   P     HQH T+  H    H  Q P +   P     +PHH  NHP
Sbjct: 264 SRQDQTPHHHMHSHP-----HQHQTLPPHHPYPHQHQHPAHHPHP-----QPHHQQNHP 312


>sp|P24064|CLPP_WHEAT ATP-dependent Clp protease proteolytic subunit
           OS=Triticum aestivum GN=clpP PE=3 SV=2
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|A1E9U9|CLPP_SORBI ATP-dependent Clp protease proteolytic subunit
           OS=Sorghum bicolor GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|Q6ENT9|CLPP_SACOF ATP-dependent Clp protease proteolytic subunit
           OS=Saccharum officinarum GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|Q6L377|CLPP_SACHY ATP-dependent Clp protease proteolytic subunit
           OS=Saccharum hybrid GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|P0C314|CLPP_ORYSJ ATP-dependent Clp protease proteolytic subunit
           OS=Oryza sativa subsp. japonica GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|P0C313|CLPP_ORYSI ATP-dependent Clp protease proteolytic subunit
           OS=Oryza sativa subsp. indica GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|P0C312|CLPP_ORYSA ATP-dependent Clp protease proteolytic subunit
           OS=Oryza sativa GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144


>sp|Q6ENE9|CLPP_ORYNI ATP-dependent Clp protease proteolytic subunit
           OS=Oryza nivara GN=clpP PE=3 SV=1
          Length = 216

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R   P FL  +
Sbjct: 107 LLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEV 144
tr_hit_id Q6B4Y6
Definition tr|Q6B4Y6|Q6B4Y6_9BACT Dinitrogenase reductase (Fragment) OS=uncultured bacterium
Align length 64
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917708|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_D11.
         (459 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6B4Y6|Q6B4Y6_9BACT Dinitrogenase reductase (Fragment) OS=unc...    34   3.2  
tr|B8Y2Z8|B8Y2Z8_FESAR Clp protease proteolytic subunit OS=Festu...    34   4.1  
tr|Q59G47|Q59G47_HUMAN cAMP responsive element binding protein 5...    33   7.1  
tr|B5BUH3|B5BUH3_HUMAN cAMP responsive element binding protein 5...    33   7.1  
tr|B4DU13|B4DU13_HUMAN cDNA FLJ50677, highly similar to cAMP res...    33   7.1  
tr|Q8MMZ9|Q8MMZ9_DICDI Putative uncharacterized protein OS=Dicty...    33   9.2  

>tr|Q6B4Y6|Q6B4Y6_9BACT Dinitrogenase reductase (Fragment)
           OS=uncultured bacterium GN=nifH PE=4 SV=1
          Length = 146

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +3

Query: 42  SWVSAEL*PTT--TICWVASPPAKCSTSILQ*CSTSKYATAAR--APPTSLLLSACPFDR 209
           SW SA     T    CW ASP A CST   +   TS  AT+ R  + P S    A P   
Sbjct: 17  SWSSAATPRPTPPVFCWAASPSAPCSTPSARKARTSNSATSVRKASAPRSAWNPAAPNPA 76

Query: 210 TILP 221
           + +P
Sbjct: 77  SAVP 80


>tr|B8Y2Z8|B8Y2Z8_FESAR Clp protease proteolytic subunit OS=Festuca
           arundinacea GN=clpP PE=4 SV=1
          Length = 214

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 80  MLGGKPTSKMLHQHITIMLHQQI-CHSRQGPPNFLTPI 190
           +LGG+PT ++   H  IMLHQ    + R G P FL  +
Sbjct: 105 LLGGEPTKRIAFPHARIMLHQPASAYYRAGTPEFLLEV 142


>tr|Q59G47|Q59G47_HUMAN cAMP responsive element binding protein 5
           isoform beta variant (Fragment) OS=Homo sapiens PE=2
           SV=1
          Length = 368

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = +2

Query: 53  SRVIANNHHMLGGKPTSKMLHQHITIMLHQQICHSRQGPPNFLTPISLPLRPHHTTNHP 229
           SR     HH +   P     HQH T+  H    H  Q P +   P     +PHH  NHP
Sbjct: 124 SRQDQTPHHHMHSHP-----HQHQTLPPHHPYPHQHQHPAHHPHP-----QPHHQQNHP 172


>tr|B5BUH3|B5BUH3_HUMAN cAMP responsive element binding protein 5
           isoform alpha (CAMP responsive element binding protein
           5, isoform CRA_c) (Fragment) OS=Homo sapiens GN=CREB5
           PE=2 SV=1
          Length = 508

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = +2

Query: 53  SRVIANNHHMLGGKPTSKMLHQHITIMLHQQICHSRQGPPNFLTPISLPLRPHHTTNHP 229
           SR     HH +   P     HQH T+  H    H  Q P +   P     +PHH  NHP
Sbjct: 264 SRQDQTPHHHMHSHP-----HQHQTLPPHHPYPHQHQHPAHHPHP-----QPHHQQNHP 312


>tr|B4DU13|B4DU13_HUMAN cDNA FLJ50677, highly similar to cAMP
           response element-binding protein 5 OS=Homo sapiens
           GN=CREB5 PE=2 SV=1
          Length = 369

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = +2

Query: 53  SRVIANNHHMLGGKPTSKMLHQHITIMLHQQICHSRQGPPNFLTPISLPLRPHHTTNHP 229
           SR     HH +   P     HQH T+  H    H  Q P +   P     +PHH  NHP
Sbjct: 125 SRQDQTPHHHMHSHP-----HQHQTLPPHHPYPHQHQHPAHHPHP-----QPHHQQNHP 173


>tr|Q8MMZ9|Q8MMZ9_DICDI Putative uncharacterized protein
            OS=Dictyostelium discoideum GN=DDB_0169228 PE=4 SV=1
          Length = 2625

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 4/55 (7%)
 Frame = +2

Query: 74   HHMLGGKPTSKMLHQ----HITIMLHQQICHSRQGPPNFLTPISLPLRPHHTTNH 226
            HH      +S   H     H     HQ I HS   P   L+P S+    HH  NH
Sbjct: 2473 HHQSSSSSSSTQKHHSSSSHGRFKNHQSILHSFNSPTQQLSPASIQSLNHHLQNH 2527