BP917714 |
Clone id |
YMU001_000104_E06 |
Library |
YMU01 |
Length |
519 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_E06. |
Accession |
BP917714 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2848Contig1 |
Sequence |
TGGAGCTTACGTTGAGGTCATGGATGAATACTGAGGAAAACAAGCGTCGCATGCTGCAAA AGAACGACATAGCATCAGCAATAACGCGCACTGACATATTTGATTTCCTGGTAGACATTG TTCCAAGGGATGAAATGAAGGAGGAAGCTGTGGGATTACCACAAGCAAGGCTTCCGCTTG ATGCATTGGCTGATGGAATGCACTATGGGGGGGTGTATTACACACATCAACCAGCAGTTT TGGCAGGCAGACAGGGCCATCTATCGCAGGGAATTACAGATTCGCCTAGCATGATTGTAC CGCAACCCATTGCACCTATGGACTCAGCTATGTGTACATCGCAGCCAAGGCCATCTATGC CATGTGATGTACAGCGGCCAATGAAGCAGGTATGGCAGCCCTTTAGAATTCTTGATTTAC CGACCGATGGTATACCAAAGGCCATGCTGTGAATAGGTTTGTGATGTTGTGCACCGTGTA GATTTTCGAAGCTGCTCTCTGAAGACGAAGGTTCTTATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8L4B2 |
Definition |
sp|Q8L4B2|NFYC9_ARATH Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana |
Align length |
90 |
Score (bit) |
93.6 |
E-value |
5.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q655V5 |
Definition |
tr|Q655V5|Q655V5_ORYSJ Os06g0667100 protein OS=Oryza sativa subsp. japonica |
Align length |
93 |
Score (bit) |
110.0 |
E-value |
4.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917714|Adiantum capillus-veneris mRNA, clone: YMU001_000104_E06. (519 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q655V5|Q655V5_ORYSJ Os06g0667100 protein OS=Oryza sativa subs... 110 4e-23 tr|A2YFZ9|A2YFZ9_ORYSI Putative uncharacterized protein OS=Oryza... 110 4e-23 tr|B4FLF9|B4FLF9_MAIZE Nuclear transcription factor Y subunit C-... 107 3e-22 tr|A7QMH1|A7QMH1_VITVI Chromosome chr19 scaffold_126, whole geno... 105 1e-21 tr|A5B007|A5B007_VITVI Putative uncharacterized protein OS=Vitis... 105 1e-21 tr|Q6H707|Q6H707_ORYSJ cDNA, clone: J100067L16, full insert sequ... 105 1e-21 tr|Q0E3J5|Q0E3J5_ORYSJ Os02g0170500 protein OS=Oryza sativa subs... 105 1e-21 tr|A2X1E4|A2X1E4_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|B6TGA9|B6TGA9_MAIZE Nuclear transcription factor Y subunit C-... 105 2e-21 tr|A9NKD3|A9NKD3_PICSI Putative uncharacterized protein OS=Picea... 102 9e-21 tr|Q2HTM1|Q2HTM1_MEDTR Histone-fold/TFIID-TAF/NF-Y OS=Medicago t... 100 4e-20 tr|Q38HS7|Q38HS7_SOLTU Putative uncharacterized protein OS=Solan... 99 1e-19 tr|Q2VY17|Q2VY17_SOLLC CONSTANS interacting protein 2b OS=Solanu... 99 1e-19 tr|B7FI76|B7FI76_MEDTR Putative uncharacterized protein OS=Medic... 99 2e-19 tr|B4FWZ1|B4FWZ1_MAIZE Nuclear transcription factor Y subunit C-... 98 2e-19 tr|B1Q480|B1Q480_CAPCH Putative CONSTANS interacting protein 2b ... 98 2e-19 tr|Q76FX1|Q76FX1_DAUCA CCAAT-box binding factor HAP5 homolog OS=... 97 5e-19 tr|B2LSM2|B2LSM2_9CONI HAP5B OS=Picea wilsonii PE=2 SV=1 96 1e-18 tr|A9PFA6|A9PFA6_POPTR Putative uncharacterized protein OS=Popul... 96 1e-18 tr|A9NKR8|A9NKR8_PICSI Putative uncharacterized protein OS=Picea... 96 1e-18 tr|A9U0Z8|A9U0Z8_PHYPA Predicted protein (Fragment) OS=Physcomit... 95 2e-18 tr|A1YMZ3|A1YMZ3_BRACM DNA binding transcription factor OS=Brass... 94 3e-18 tr|A9S6G4|A9S6G4_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 4e-18 tr|Q2VY18|Q2VY18_SOLLC CONSTANS interacting protein 2a OS=Solanu... 92 1e-17 tr|A9NTJ8|A9NTJ8_PICSI Putative uncharacterized protein OS=Picea... 90 6e-17 tr|A9NUT0|A9NUT0_PICSI Putative uncharacterized protein OS=Picea... 89 1e-16 tr|A7NWG9|A7NWG9_VITVI Chromosome chr5 scaffold_2, whole genome ... 89 1e-16 tr|A5B819|A5B819_VITVI Putative uncharacterized protein (Fragmen... 89 2e-16 tr|A5AFH0|A5AFH0_VITVI Putative uncharacterized protein OS=Vitis... 89 2e-16 tr|Q76FX2|Q76FX2_DAUCA CCAAT-box binding factor HAP5 homolog OS=... 86 1e-15
>tr|Q655V5|Q655V5_ORYSJ Os06g0667100 protein OS=Oryza sativa subsp. japonica GN=P0637D03.35 PE=2 SV=1 Length = 250
Score = 110 bits (275), Expect = 4e-23 Identities = 61/93 (65%), Positives = 69/93 (74%), Gaps = 7/93 (7%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARL-PL 179 ELTLRSWM+TEENKRR LQKNDIA+AITRTD++DFLVDIVPRD++KEE VGLP+A L PL Sbjct: 138 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVGLPRAGLPPL 197
Query: 180 DALADGMHYGGVYYTHQPAV------LAGRQGH 260 AD YG YY Q V G+QGH Sbjct: 198 GVPADSYPYG--YYVPQQQVPGAGIAYGGQQGH 228
>tr|A2YFZ9|A2YFZ9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24041 PE=4 SV=1 Length = 250
Score = 110 bits (275), Expect = 4e-23 Identities = 61/93 (65%), Positives = 69/93 (74%), Gaps = 7/93 (7%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARL-PL 179 ELTLRSWM+TEENKRR LQKNDIA+AITRTD++DFLVDIVPRD++KEE VGLP+A L PL Sbjct: 138 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVGLPRAGLPPL 197
Query: 180 DALADGMHYGGVYYTHQPAV------LAGRQGH 260 AD YG YY Q V G+QGH Sbjct: 198 GVPADSYPYG--YYVPQQQVPGAGIAYGGQQGH 228
>tr|B4FLF9|B4FLF9_MAIZE Nuclear transcription factor Y subunit C-2 OS=Zea mays PE=2 SV=1 Length = 248
Score = 107 bits (268), Expect = 3e-22 Identities = 60/93 (64%), Positives = 68/93 (73%), Gaps = 7/93 (7%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARL-PL 179 ELTLRSWM+TEENKRR LQKNDIA+AITRTDI+DFLVDIVPRDEMKE+ +GLP+A L P+ Sbjct: 136 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEDGIGLPRAGLPPM 195
Query: 180 DALADGMHYGGVYYTHQP------AVLAGRQGH 260 A AD Y YY Q V +QGH Sbjct: 196 GAPADAYPY---YYMPQQQVPGSGMVYGAQQGH 225
>tr|A7QMH1|A7QMH1_VITVI Chromosome chr19 scaffold_126, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002065001 PE=4 SV=1 Length = 182
Score = 105 bits (263), Expect = 1e-21 Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 1/121 (0%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARLP-L 179 ELTLRSW++TEENKRR LQKNDIA+AI+RTD+FDFLVDI+PRDE+KEE +G+ +A +P + Sbjct: 57 ELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKASIPVV 116
Query: 180 DALADGMHYGGVYYTHQPAVLAGRQGHLSQGITDSPSMIVPQPIAPMDSAMCTSQPRPSM 359 + AD + Y YY P V G G MI+ + + S QPRP + Sbjct: 117 GSPADAIPY---YYVPPPPV--GPTG-----------MIMGKAVVDQSSIYAAQQPRPPV 160
Query: 360 P 362 P Sbjct: 161 P 161
>tr|A5B007|A5B007_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021045 PE=4 SV=1 Length = 269
Score = 105 bits (263), Expect = 1e-21 Identities = 60/121 (49%), Positives = 78/121 (64%), Gaps = 1/121 (0%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARLP-L 179 ELTLRSW++TEENKRR LQKNDIA+AI+RTD+FDFLVDI+PRDE+KEE +G+ +A +P + Sbjct: 144 ELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKASIPVV 203
Query: 180 DALADGMHYGGVYYTHQPAVLAGRQGHLSQGITDSPSMIVPQPIAPMDSAMCTSQPRPSM 359 + AD + Y YY P V G G MI+ + + S QPRP + Sbjct: 204 GSPADAIPY---YYVPPPPV--GPTG-----------MIMGKAVVDQSSIYAAQQPRPPV 247
Query: 360 P 362 P Sbjct: 248 P 248
>tr|Q6H707|Q6H707_ORYSJ cDNA, clone: J100067L16, full insert sequence OS=Oryza sativa subsp. japonica GN=P0030G02.21 PE=2 SV=1 Length = 259
Score = 105 bits (262), Expect = 1e-21 Identities = 58/91 (63%), Positives = 66/91 (72%), Gaps = 5/91 (5%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARLP-- 176 ELTLRSWM+TEENKRR LQKNDIA+AITRTDI+DFLVDIVPRDEMKEE +GLP+ LP Sbjct: 142 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPN 201
Query: 177 LDALADGMHYGGVYYTHQPA---VLAGRQGH 260 + AD Y V P + G+QGH Sbjct: 202 VGGAADTYPYYYVPAQQGPGSGMMYGGQQGH 232
>tr|Q0E3J5|Q0E3J5_ORYSJ Os02g0170500 protein OS=Oryza sativa subsp. japonica GN=Os02g0170500 PE=4 SV=1 Length = 277
Score = 105 bits (262), Expect = 1e-21 Identities = 58/91 (63%), Positives = 66/91 (72%), Gaps = 5/91 (5%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARLP-- 176 ELTLRSWM+TEENKRR LQKNDIA+AITRTDI+DFLVDIVPRDEMKEE +GLP+ LP Sbjct: 160 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPN 219
Query: 177 LDALADGMHYGGVYYTHQPA---VLAGRQGH 260 + AD Y V P + G+QGH Sbjct: 220 VGGAADTYPYYYVPAQQGPGSGMMYGGQQGH 250
>tr|A2X1E4|A2X1E4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06025 PE=4 SV=1 Length = 259
Score = 105 bits (262), Expect = 1e-21 Identities = 58/91 (63%), Positives = 66/91 (72%), Gaps = 5/91 (5%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARLP-- 176 ELTLRSWM+TEENKRR LQKNDIA+AITRTDI+DFLVDIVPRDEMKEE +GLP+ LP Sbjct: 142 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKEEGLGLPRVGLPPN 201
Query: 177 LDALADGMHYGGVYYTHQPA---VLAGRQGH 260 + AD Y V P + G+QGH Sbjct: 202 VGGAADTYPYYYVPAQQGPGSGMMYGGQQGH 232
>tr|B6TGA9|B6TGA9_MAIZE Nuclear transcription factor Y subunit C-2 OS=Zea mays PE=2 SV=1 Length = 255
Score = 105 bits (261), Expect = 2e-21 Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 7/93 (7%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARL-PL 179 ELTLRSWM+TEENKRR LQKNDIA+AITRTDI+DFLVDIVPRDEMK++ +GLP+ L P+ Sbjct: 139 ELTLRSWMHTEENKRRTLQKNDIAAAITRTDIYDFLVDIVPRDEMKDDGIGLPRPGLPPM 198
Query: 180 DALADGMHYGGVYYTHQ-----PAVLAG-RQGH 260 A AD Y YY Q P ++ G +QGH Sbjct: 199 GAPADAYPY---YYMPQQQVPGPGMVYGAQQGH 228
>tr|A9NKD3|A9NKD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 309
Score = 102 bits (255), Expect = 9e-21 Identities = 63/135 (46%), Positives = 83/135 (61%), Gaps = 3/135 (2%) Frame = +3
Query: 3 ELTLRSWMNTEENKRRMLQKNDIASAITRTDIFDFLVDIVPRDEMKEEAVGLPQARLPLD 182 ELT+RSW++ EENKRR LQKNDIA+AITRTDIFDFLVDIVPRD++KEE +GL AR Sbjct: 132 ELTMRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDDLKEEGLGLGFAR---- 187
Query: 183 ALADGMHYGGVYYTHQPAVLAGRQGHLSQGITDSPSMIV--PQPIAPMDSAMCTSQPRPS 356 G+ G +Y P++ Q QG+ S+++ P P+ SAM Q +P Sbjct: 188 ---GGVTPEGSFYYPPPSM---PQSPHQQGMMGPSSIMMGRPAPLQMDPSAMYMQQQQPP 241
Query: 357 MPCDV-QRPMKQVWQ 398 P + P + +WQ Sbjct: 242 RPYGMPPHPHQPMWQ 256
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