BP917716 |
Clone id |
YMU001_000104_E09 |
Library |
YMU01 |
Length |
452 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_E09. |
Accession |
BP917716 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2904Contig1 |
Sequence |
CCAAAACCCCTCTTAAGTTAACTAACAAAAATATCACCAAGCACGTGCAGGAAAAACACT AGTGTTGTCAAGCATCACAAGCCATTCCAAAATACAAGGCCACATAACCACCTTCATTGC TAGGAGCATGCCCCTGACAACAGTACCAGTATATATCCATATGCTGCTATTGCAGACAAA GACAGAACGTCCAATTTAACACTCAAAACTATACGTGCAGACATAATCTTTTTACTCTTC ATCCTCTGACTCGGCACTACGAAGCCACTCAACGAATGGTGTCGCCAATTTCTTCACCTC ACCAGCTGTAGAGCTGAAACCCTCAGCAGCACCTTTGTCATACCAAGCCAAGATAGGTTC TTCTTCCAGTAGATCCAGGTCATAAAAGACTTTCAGCGAACCAGCAAGCTCGACCTCCTT TCTAAACTCTGTCGGCACTCCCACAAAGTGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S825 |
Definition |
sp|Q9S825|IF5Z_ARATH Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana |
Align length |
65 |
Score (bit) |
58.9 |
E-value |
1.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U5A9 |
Definition |
tr|A9U5A9|A9U5A9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
75 |
Score (bit) |
62.8 |
E-value |
8.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917716|Adiantum capillus-veneris mRNA, clone: YMU001_000104_E09. (452 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U5A9|A9U5A9_PHYPA Predicted protein (Fragment) OS=Physcomit... 63 8e-09 tr|A9SM65|A9SM65_PHYPA Predicted protein OS=Physcomitrella paten... 62 2e-08 tr|A7NV57|A7NV57_VITVI Chromosome chr18 scaffold_1, whole genome... 59 9e-08 tr|Q5Z4V2|Q5Z4V2_ORYSJ cDNA, clone: J100063D05, full insert sequ... 57 5e-07 tr|A2YGM5|A2YGM5_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07 tr|B7FIR2|B7FIR2_MEDTR Putative uncharacterized protein OS=Medic... 57 6e-07 tr|Q762A7|Q762A7_ORYSJ BRI1-KD interacting protein 107 (Fragment... 56 8e-07 tr|Q6K2P9|Q6K2P9_ORYSJ Os09g0326900 protein OS=Oryza sativa subs... 56 8e-07 tr|Q6K2P8|Q6K2P8_ORYSJ Putative eukaryotic translation initiatio... 56 8e-07 tr|A2YZW8|A2YZW8_ORYSI Putative uncharacterized protein OS=Oryza... 56 8e-07 tr|B6T7C2|B6T7C2_MAIZE Eukaryotic translation initiation factor ... 56 1e-06 tr|Q9NJD1|Q9NJD1_SCHMA Eukaryotic translation initiation factor ... 56 1e-06 tr|B4JN79|B4JN79_DROGR GH24190 OS=Drosophila grimshawi GN=GH2419... 55 1e-06 tr|A3RCW1|A3RCW1_WHEAT Translation initiation factor eIF5 OS=Tri... 55 2e-06 tr|B4NCA3|B4NCA3_DROWI GK25118 OS=Drosophila willistoni GN=GK251... 55 2e-06 tr|Q64GL3|Q64GL3_SCHJA Translation initiation factor 5-like prot... 54 3e-06 tr|Q5DDG2|Q5DDG2_SCHJA SJCHGC02223 protein OS=Schistosoma japoni... 54 3e-06 tr|Q5BXQ7|Q5BXQ7_SCHJA SJCHGC02222 protein (Fragment) OS=Schisto... 54 3e-06 tr|B4L5G0|B4L5G0_DROMO GI21522 OS=Drosophila mojavensis GN=GI215... 54 3e-06 tr|B4MAX1|B4MAX1_DROVI GJ15997 OS=Drosophila virilis GN=GJ15997 ... 54 4e-06 tr|A7PR44|A7PR44_VITVI Chromosome chr14 scaffold_26, whole genom... 54 5e-06 tr|A5AT95|A5AT95_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06 tr|B5DVW4|B5DVW4_DROPS GA27482 OS=Drosophila pseudoobscura pseud... 54 5e-06 tr|B4HCC2|B4HCC2_DROPE GL11549 OS=Drosophila persimilis GN=GL115... 54 5e-06 tr|B4R5K8|B4R5K8_DROSI GD15766 OS=Drosophila simulans GN=GD15766... 53 7e-06 tr|B4PXA7|B4PXA7_DROYA eIF5 OS=Drosophila yakuba GN=Dyak\eIF5 PE... 53 7e-06 tr|B3NXG1|B3NXG1_DROER GG19351 OS=Drosophila erecta GN=GG19351 P... 53 7e-06 tr|B0W0M0|B0W0M0_CULQU Eukaryotic translation initiation factor ... 53 7e-06 tr|B6M1D7|B6M1D7_BRAFL Putative uncharacterized protein OS=Branc... 51 3e-05 tr|Q5ZIE0|Q5ZIE0_CHICK Putative uncharacterized protein OS=Gallu... 51 3e-05
>tr|A9U5A9|A9U5A9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_3880 PE=4 SV=1 Length = 444
Score = 62.8 bits (151), Expect = 8e-09 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 7/75 (9%) Frame = -3
Query: 438 VPTEFRKEVELAGSLKVFYDLDLLEEEPILAWYD-----KGAAEGFS--STAGEVKKLAT 280 +P KE+ L LKV YD ++LEEE IL WYD K +A G S A V+K A Sbjct: 370 LPLNASKEIALL--LKVLYDAEILEEEQILLWYDAVPSGKSSANGSGAGSKAACVRKSAL 427
Query: 279 PFVEWLRSAESEDEE 235 PF++WLRSAE+E EE Sbjct: 428 PFIDWLRSAEAESEE 442
>tr|A9SM65|A9SM65_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_186444 PE=4 SV=1 Length = 451
Score = 61.6 bits (148), Expect = 2e-08 Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%) Frame = -3
Query: 438 VPTEFRKEVELAGSLKVFYDLDLLEEEPILAWYDK-GAAEGFSSTAGE-VKKLATPFVEW 265 +P KE+ L LKV YD ++LEEE IL WYD + G +++ G V+K A PFV+W Sbjct: 380 LPPNASKEIPLL--LKVLYDEEILEEEQILLWYDAVPSTNGSANSPGALVRKSALPFVDW 437
Query: 264 LRSAESEDEE*KD 226 LRSAE+E EE D Sbjct: 438 LRSAEAESEEEDD 450
>tr|A7NV57|A7NV57_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015309001 PE=4 SV=1 Length = 363
Score = 59.3 bits (142), Expect = 9e-08 Identities = 34/62 (54%), Positives = 41/62 (66%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV L LK YD DLLEEE IL WY +G A G ++ ++ K PF+EWL+SAESE Sbjct: 305 KEVGLV--LKALYDNDLLEEEFILEWYKQGLAGGNKNS--KIWKNVKPFIEWLQSAESES 360
Query: 240 EE 235 EE Sbjct: 361 EE 362
>tr|Q5Z4V2|Q5Z4V2_ORYSJ cDNA, clone: J100063D05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0545E05.8 PE=2 SV=1 Length = 450
Score = 57.0 bits (136), Expect = 5e-07 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV + LK YD D+L+EE I WY++ A G S +V K A PFVEWL+SA+SE Sbjct: 393 KEVPIV--LKALYDGDILDEEVITQWYNESVAAGKES---QVVKNAKPFVEWLQSADSES 447
Query: 240 EE 235 EE Sbjct: 448 EE 449
>tr|A2YGM5|A2YGM5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24333 PE=4 SV=1 Length = 450
Score = 57.0 bits (136), Expect = 5e-07 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV + LK YD D+L+EE I WY++ A G S +V K A PFVEWL+SA+SE Sbjct: 393 KEVPIV--LKALYDGDILDEEVITQWYNESVAAGKES---QVVKNAKPFVEWLQSADSES 447
Query: 240 EE 235 EE Sbjct: 448 EE 449
>tr|B7FIR2|B7FIR2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 228
Score = 56.6 bits (135), Expect = 6e-07 Identities = 31/59 (52%), Positives = 39/59 (66%) Frame = -3
Query: 411 ELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESEDEE 235 E+A LK YD D LEEE IL WY +G +G + A ++ K PF+EWL+SAESE EE Sbjct: 171 EVALVLKALYDADALEEEHILQWYQEG-LKGDTKNA-QIWKNVKPFIEWLQSAESESEE 227
>tr|Q762A7|Q762A7_ORYSJ BRI1-KD interacting protein 107 (Fragment) OS=Oryza sativa subsp. japonica GN=bip107 PE=2 SV=1 Length = 388
Score = 56.2 bits (134), Expect = 8e-07 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV + LK YD D+L+EE I WY++ A G S +V K A PFVEWL+SA+SE Sbjct: 331 KEVPIV--LKALYDGDVLDEEVITQWYNESVAGGKES---QVVKNAKPFVEWLQSADSES 385
Query: 240 EE 235 EE Sbjct: 386 EE 387
>tr|Q6K2P9|Q6K2P9_ORYSJ Os09g0326900 protein OS=Oryza sativa subsp. japonica GN=P0706E03.4-1 PE=2 SV=1 Length = 450
Score = 56.2 bits (134), Expect = 8e-07 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV + LK YD D+L+EE I WY++ A G S +V K A PFVEWL+SA+SE Sbjct: 393 KEVPIV--LKALYDGDVLDEEVITQWYNESVAGGKES---QVVKNAKPFVEWLQSADSES 447
Query: 240 EE 235 EE Sbjct: 448 EE 449
>tr|Q6K2P8|Q6K2P8_ORYSJ Putative eukaryotic translation initiation factor 5 OS=Oryza sativa subsp. japonica GN=P0706E03.4-2 PE=4 SV=1 Length = 333
Score = 56.2 bits (134), Expect = 8e-07 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV + LK YD D+L+EE I WY++ A G S +V K A PFVEWL+SA+SE Sbjct: 276 KEVPIV--LKALYDGDVLDEEVITQWYNESVAGGKES---QVVKNAKPFVEWLQSADSES 330
Query: 240 EE 235 EE Sbjct: 331 EE 332
>tr|A2YZW8|A2YZW8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30903 PE=4 SV=1 Length = 450
Score = 56.2 bits (134), Expect = 8e-07 Identities = 32/62 (51%), Positives = 40/62 (64%) Frame = -3
Query: 420 KEVELAGSLKVFYDLDLLEEEPILAWYDKGAAEGFSSTAGEVKKLATPFVEWLRSAESED 241 KEV + LK YD D+L+EE I WY++ A G S +V K A PFVEWL+SA+SE Sbjct: 393 KEVPIV--LKALYDGDVLDEEVITQWYNESVAGGKES---QVVKNAKPFVEWLQSADSES 447
Query: 240 EE 235 EE Sbjct: 448 EE 449
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