BP917728
Clone id YMU001_000104_F10
Library
Length 247
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTGGCCAGATGGTCATTCTTGTGAGGCGACCGTCTTGATGTCGATTGTATCGGATAAAG
GAGCTACGGTGGGGGATGCAGTTAAGCACCACTTCTTTATGTATGATAATGGCAGTTCCA
TGTTGCAAGGGGACACGAGAGGCCTGTTATAGCACTCGCTATTGTGTGGTTAAGATAGCT
GACAGGAATGCTGGATGTAGGAGGCAGATTTTGCTAATGTTCGGACTTTGCAGGGAGACA
ATAATGC
■■Homology search results ■■ -
sp_hit_id Q5KN81
Definition sp|Q5KN81|DPH1_CRYNE Diphthamide biosynthesis protein 1 OS=Cryptococcus neoformans
Align length 53
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917728|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_F10.
(247 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5KN81|DPH1_CRYNE Diphthamide biosynthesis protein 1 OS=Crypt... 29 6.4
sp|Q8TFG4|YL54_SCHPO Uncharacterized protein PB18E9.04c OS=Schiz... 29 8.3

>sp|Q5KN81|DPH1_CRYNE Diphthamide biosynthesis protein 1
OS=Cryptococcus neoformans GN=DPH1 PE=3 SV=1
Length = 529

Score = 29.3 bits (64), Expect = 6.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1

Query: 241 LSPCKVRTLAKS--ASYIQHSCQLS*PHNSECYNRPLVSPCNMELPLSYIKKW 89
LSP K+ L S +++IQ SC ++RPL+SP + + +K W
Sbjct: 420 LSPAKLALLPNSQISTFIQTSCPRLSIDWGYAFSRPLLSPYEASVAVGRVKGW 472


>sp|Q8TFG4|YL54_SCHPO Uncharacterized protein PB18E9.04c
OS=Schizosaccharomyces pombe GN=SPAPB18E9.04c PE=2 SV=1
Length = 800

Score = 28.9 bits (63), Expect = 8.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2

Query: 201 PTSSIPVSYLNHTIASAITGLSCPLATWNC 112
P +S PV+ N+TI+S+ S P+ T NC
Sbjct: 503 PYTSTPVTSSNYTISSSTPVTSTPVTTTNC 532



Score = 28.9 bits (63), Expect = 8.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2

Query: 201 PTSSIPVSYLNHTIASAITGLSCPLATWNC 112
P +S PV+ N+TI+S+ S P+ T NC
Sbjct: 562 PYTSTPVTSSNYTISSSTPVTSTPVTTTNC 591


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917728|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_F10.
(247 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******