BP917729 |
Clone id |
YMU001_000104_F11 |
Library |
YMU01 |
Length |
192 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_F11. |
Accession |
BP917729 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGAGAGCGTCAGTGAGGTGTGGGCTGGCGATGGCAGTCTCTGTGAAAAGCCTGCTGATG GTGGCCTCTTTGCTGCTGGTGCTACAGACACATGTAGCGGCGCAGGCGCAGGCCCAGGCG GGAGGACAATATTGTGCCACCGTCGGACCCAACTTGAGTGATGTGTGCAAGGATTTTTTG GTGGGTGGCTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6MG48 |
Definition |
sp|Q6MG48|BAT2_RAT Large proline-rich protein BAT2 OS=Rattus norvegicus |
Align length |
43 |
Score (bit) |
33.1 |
E-value |
0.45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917729|Adiantum capillus-veneris mRNA, clone: YMU001_000104_F11. (192 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6MG48|BAT2_RAT Large proline-rich protein BAT2 OS=Rattus nor... 33 0.45 sp|Q7TSC1|BAT2_MOUSE Large proline-rich protein BAT2 OS=Mus musc... 33 0.45 sp|Q5TM26|BAT2_MACMU Large proline-rich protein BAT2 OS=Macaca m... 33 0.45 sp|P48634|BAT2_HUMAN Large proline-rich protein BAT2 OS=Homo sap... 33 0.45 sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subun... 33 0.59 sp|Q9FLQ7|FH20_ARATH Formin-like protein 20 OS=Arabidopsis thali... 33 0.59 sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protei... 32 1.0 sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protei... 32 1.0 sp|Q24120|CAPU_DROME Protein cappuccino OS=Drosophila melanogast... 32 1.0 sp|Q8CJQ8|IF2_STRCO Translation initiation factor IF-2 OS=Strept... 32 1.3 sp|P13290|VGLG_HHV2H Glycoprotein G OS=Human herpesvirus 2 (stra... 31 2.2 sp|Q27022|SP23_TENMO Spermatophorin SP23 OS=Tenebrio molitor GN=... 31 2.2 sp|Q99583|MNT_HUMAN Max-binding protein MNT OS=Homo sapiens GN=M... 31 2.2 sp|Q6ZVT0|TTL10_HUMAN Probable tubulin polyglutamylase TTLL10 OS... 30 3.8 sp|Q9W757|SOX10_CHICK Transcription factor SOX-10 OS=Gallus gall... 30 3.8 sp|Q9WVS8|MK07_MOUSE Mitogen-activated protein kinase 7 OS=Mus m... 30 3.8 sp|Q9C6S1|FH14_ARATH Formin-like protein 14 OS=Arabidopsis thali... 30 3.8 sp|P23610|F8I2_HUMAN Factor VIII intron 22 protein OS=Homo sapie... 30 3.8 sp|P96921|EX5C_MYCTU Exodeoxyribonuclease V gamma chain OS=Mycob... 30 3.8 sp|Q8TE68|ES8L1_HUMAN Epidermal growth factor receptor kinase su... 30 3.8 sp|P19419|ELK1_HUMAN ETS domain-containing protein Elk-1 OS=Homo... 30 3.8 sp|Q6AYU3|DNJB6_RAT DnaJ homolog subfamily B member 6 OS=Rattus ... 30 3.8 sp|Q32PF6|DBP_BOVIN D site-binding protein OS=Bos taurus GN=DBP ... 30 3.8 sp|A5DVD6|PAN1_LODEL Actin cytoskeleton-regulatory complex prote... 30 5.0 sp|Q6ZCX3|FH6_ORYSJ Formin-like protein 6 OS=Oryza sativa subsp.... 30 5.0 sp|Q9MEV6|ATP8_SCIVU ATP synthase protein 8 OS=Sciurus vulgaris ... 30 5.0 sp|Q08E66|WFKN2_BOVIN WAP, kazal, immunoglobulin, kunitz and NTR... 29 6.5 sp|Q5F489|TAF3_CHICK Transcription initiation factor TFIID subun... 29 6.5 sp|P21997|SSGP_VOLCA Sulfated surface glycoprotein 185 OS=Volvox... 29 6.5 sp|Q5MJ70|SPDYA_HUMAN Speedy protein A OS=Homo sapiens GN=SPDYA ... 29 6.5
>sp|Q6MG48|BAT2_RAT Large proline-rich protein BAT2 OS=Rattus norvegicus GN=Bat2 PE=1 SV=1 Length = 2161
Score = 33.1 bits (74), Expect = 0.45 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%) Frame = -3
Query: 124 LPPGPAPAPLHVSVAPA---------AKRPPSAGFSQRLPSPA 23 LPP P PAP +S+ P A RPP A ++ LPSPA Sbjct: 2000 LPPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLPSPA 2042
>sp|Q7TSC1|BAT2_MOUSE Large proline-rich protein BAT2 OS=Mus musculus GN=Bat2 PE=1 SV=1 Length = 2158
Score = 33.1 bits (74), Expect = 0.45 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%) Frame = -3
Query: 124 LPPGPAPAPLHVSVAPA---------AKRPPSAGFSQRLPSPA 23 LPP P PAP +S+ P A RPP A ++ LPSPA Sbjct: 1997 LPPAPPPAPPPLSLLPVGPALQPPNLAVRPPPAPAARVLPSPA 2039
>sp|Q5TM26|BAT2_MACMU Large proline-rich protein BAT2 OS=Macaca mulatta GN=BAT2 PE=3 SV=1 Length = 2160
Score = 33.1 bits (74), Expect = 0.45 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%) Frame = -3
Query: 124 LPPGPAPAPLHVSVAPA---------AKRPPSAGFSQRLPSPA 23 LPP P PAP +S+ P A RPP A ++ LPSPA Sbjct: 1999 LPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPA 2041
>sp|P48634|BAT2_HUMAN Large proline-rich protein BAT2 OS=Homo sapiens GN=BAT2 PE=1 SV=2 Length = 2157
Score = 33.1 bits (74), Expect = 0.45 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 9/43 (20%) Frame = -3
Query: 124 LPPGPAPAPLHVSVAPA---------AKRPPSAGFSQRLPSPA 23 LPP P PAP +S+ P A RPP A ++ LPSPA Sbjct: 1996 LPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPA 2038
>sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subunit 3 OS=Xenopus laevis GN=taf3 PE=2 SV=1 Length = 845
Score = 32.7 bits (73), Expect = 0.59 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -3
Query: 121 PPGPAPAPLHVSVAPAAKRPPSAGFSQRLPSPAHTSLT 8 PP P+PAP V V P + PP+ + P+PA ++LT Sbjct: 714 PPTPSPAPAPVLVVP-PQAPPAPAAASPAPTPAPSALT 750
>sp|Q9FLQ7|FH20_ARATH Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=2 Length = 1615
Score = 32.7 bits (73), Expect = 0.59 Identities = 18/53 (33%), Positives = 22/53 (41%) Frame = -3
Query: 184 PPKNPCTHHSSWVRRWHNIVLPPGPAPAPLHVSVAPAAKRPPSAGFSQRLPSP 26 PP P +H SS +PP P P P+H P PP G + P P Sbjct: 998 PPPPPFSHVSS---------IPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPP 1041
>sp|Q5DU25|IQEC2_MOUSE IQ motif and SEC7 domain-containing protein 2 OS=Mus musculus GN=Iqsec2 PE=1 SV=2 Length = 1478
Score = 32.0 bits (71), Expect = 1.0 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = -3
Query: 184 PPKNPCTHHSSWVRRWHNIVLPPGPAPAPLHVSVAPAAKRPPSA 53 PP +P T HS LPP PLH S P PPSA Sbjct: 1431 PPPSPHTPHSP---------LPPTSPHGPLHASGPPGTANPPSA 1465
>sp|Q5JU85|IQEC2_HUMAN IQ motif and SEC7 domain-containing protein 2 OS=Homo sapiens GN=IQSEC2 PE=2 SV=1 Length = 1478
Score = 32.0 bits (71), Expect = 1.0 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = -3
Query: 184 PPKNPCTHHSSWVRRWHNIVLPPGPAPAPLHVSVAPAAKRPPSA 53 PP +P T HS LPP PLH S P PPSA Sbjct: 1431 PPPSPHTPHSP---------LPPTSPHGPLHASGPPGTANPPSA 1465
>sp|Q24120|CAPU_DROME Protein cappuccino OS=Drosophila melanogaster GN=capu PE=2 SV=2 Length = 1059
Score = 32.0 bits (71), Expect = 1.0 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3
Query: 136 HNIVLPPGPAPAPLHVSVAPAAKRPP 59 H + PP P P PLH VAP PP Sbjct: 481 HAVAPPPPPPPPPLHAFVAPPPPPPP 506
>sp|Q8CJQ8|IF2_STRCO Translation initiation factor IF-2 OS=Streptomyces coelicolor GN=infB PE=3 SV=1 Length = 1033
Score = 31.6 bits (70), Expect = 1.3 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -3
Query: 118 PGPAPAPLHVSVAPAAKRPPSAGFSQRLPSPA 23 PGP PAP AP PP+A + P+PA Sbjct: 129 PGPKPAPRPAPAAPEFTAPPAAPAAPSTPAPA 160
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0JCT9 |
Definition |
tr|Q0JCT9|Q0JCT9_ORYSJ Os04g0449900 protein OS=Oryza sativa subsp. japonica |
Align length |
63 |
Score (bit) |
37.4 |
E-value |
0.38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917729|Adiantum capillus-veneris mRNA, clone: YMU001_000104_F11. (192 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0JCT9|Q0JCT9_ORYSJ Os04g0449900 protein OS=Oryza sativa subs... 37 0.38 tr|A2XU16|A2XU16_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.50 tr|Q01JG9|Q01JG9_ORYSA H0818E04.14 protein OS=Oryza sativa GN=H0... 37 0.65 tr|Q9DA76|Q9DA76_MOUSE Putative uncharacterized protein OS=Mus m... 35 1.4 tr|B4UK00|B4UK00_ANASK Tetratricopeptide TPR_2 repeat protein OS... 35 1.4 tr|Q29LS3|Q29LS3_DROPS GA19150 OS=Drosophila pseudoobscura pseud... 35 1.4 tr|B4G7N7|B4G7N7_DROPE GL18484 OS=Drosophila persimilis GN=GL184... 35 1.4 tr|B7FI59|B7FI59_MEDTR Putative uncharacterized protein OS=Medic... 35 1.9 tr|A2Y6X5|A2Y6X5_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9 tr|Q6L5I1|Q6L5I1_ORYSJ Os05g0536800 protein OS=Oryza sativa subs... 35 2.5 tr|Q41122|Q41122_PHAVU Proline-rich protein OS=Phaseolus vulgari... 35 2.5 tr|B7Q6M1|B7Q6M1_IXOSC Putative uncharacterized protein OS=Ixode... 34 3.2 tr|B2U791|B2U791_RALPJ Putative proline rich signal peptide prot... 34 4.2 tr|A3ALJ3|A3ALJ3_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.2 tr|A9VDQ3|A9VDQ3_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.2 tr|Q4H3P1|Q4H3P1_CIOIN Transcription factor protein OS=Ciona int... 32 4.5 tr|Q4T9V7|Q4T9V7_TETNG Chromosome undetermined SCAF7488, whole g... 33 5.5 tr|Q827R7|Q827R7_STRAW Putative uncharacterized protein OS=Strep... 33 5.5 tr|A5AYP9|A5AYP9_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5 tr|B8PFN5|B8PFN5_9APHY Predicted protein OS=Postia placenta Mad-... 33 5.5 tr|Q0IH67|Q0IH67_XENLA Putative uncharacterized protein (Fragmen... 33 7.1 tr|A1TF71|A1TF71_MYCVP FHA domain containing protein OS=Mycobact... 33 7.1 tr|B5SE32|B5SE32_RALSO Prolin-rich protein OS=Ralstonia solanace... 33 7.1 tr|Q2XNU2|Q2XNU2_ASPOF Proline-rich protein OS=Asparagus officin... 33 7.1 tr|Q4R453|Q4R453_MACFA Testis cDNA clone: QtsA-12393, similar to... 33 7.1 tr|B0LFE8|B0LFE8_PIG HLA-B associated transcript 2 OS=Sus scrofa... 33 7.1 tr|A5D9N2|A5D9N2_PIG HLA-B associated transcript 2 OS=Sus scrofa... 33 7.1 tr|Q18017|Q18017_CAEEL Protein C15C8.1, partially confirmed by t... 33 7.1 tr|B3S0P9|B3S0P9_TRIAD Putative uncharacterized protein OS=Trich... 33 7.1 tr|B5ME30|B5ME30_HUMAN Putative uncharacterized protein BAT2 OS=... 33 7.1
>tr|Q0JCT9|Q0JCT9_ORYSJ Os04g0449900 protein OS=Oryza sativa subsp. japonica GN=Os04g0449900 PE=4 SV=1 Length = 426
Score = 37.4 bits (85), Expect = 0.38 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3
Query: 187 HPPKNPCTHHSSWVRRWHNIVLPPGPAPAPLHVSVAP---------AAKRPPSAGFSQRL 35 HP +P HH RW +VLP P P P+ + P AA PP+A +R Sbjct: 29 HPDAHPHPHHPMAQARW--VVLPYPPPPPPMVAAPPPPPPQYAKHFAAGPPPAAAAGRRT 86
Query: 34 PSP 26 P+P Sbjct: 87 PTP 89
>tr|A2XU16|A2XU16_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16094 PE=4 SV=1 Length = 426
Score = 37.0 bits (84), Expect = 0.50 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3
Query: 187 HPPKNPCTHHSSWVRRWHNIVLPPGPAPAPLHVSVAP---------AAKRPPSAGFSQRL 35 HP +P HH RW +VLP P P P+ + P AA PP+A +R Sbjct: 29 HPHAHPHPHHPMAQARW--VVLPYPPPPPPMVAAPPPPPPQYAKHFAAGPPPAAAAGRRT 86
Query: 34 PSP 26 P+P Sbjct: 87 PTP 89
>tr|Q01JG9|Q01JG9_ORYSA H0818E04.14 protein OS=Oryza sativa GN=H0818E04.14 PE=4 SV=1 Length = 426
Score = 36.6 bits (83), Expect = 0.65 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3
Query: 187 HPPKNPCTHHSSWVRRWHNIVLPPGPAPAPLHVSVAP---------AAKRPPSAGFSQRL 35 HP +P HH RW +VLP P P P+ + P AA PP+A +R Sbjct: 29 HPHLHPHPHHPMAQARW--VVLPYPPPPPPMVAAPPPPPPQYAKHFAAGPPPAAAAGRRT 86
Query: 34 PSP 26 P+P Sbjct: 87 PTP 89
>tr|Q9DA76|Q9DA76_MOUSE Putative uncharacterized protein OS=Mus musculus GN=1700018M17Rik PE=2 SV=1 Length = 155
Score = 35.4 bits (80), Expect = 1.4 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3
Query: 121 PPGPAPAPLHVSVAPAAKRPPSAGFSQRLPS 29 PPGP P AP+ +RPP G+ R PS Sbjct: 63 PPGPRAVPASPGPAPSGRRPPGVGWHSRAPS 93
>tr|B4UK00|B4UK00_ANASK Tetratricopeptide TPR_2 repeat protein OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_1478 PE=4 SV=1 Length = 271
Score = 35.4 bits (80), Expect = 1.4 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = -3
Query: 118 PGPAPAPLHVSVAPAAKRPPSAGFSQRLPSPA 23 P PAP PL V V PAA PP A ++ PS A Sbjct: 183 PPPAPLPLEVEVTPAAVEPPVASPAEPTPSDA 214
>tr|Q29LS3|Q29LS3_DROPS GA19150 OS=Drosophila pseudoobscura pseudoobscura GN=GA19150 PE=4 SV=2 Length = 1812
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -3
Query: 121 PPGPAPAPLHVSVAPAAKRPPSAGFSQRLPSPAHTSLTLS 2 PP PAP + V PAA S G S+RLP A+ SL+ S Sbjct: 1202 PPAPAPVVVPVQPEPAAAATESPGRSRRLPPVANASLSHS 1241
>tr|B4G7N7|B4G7N7_DROPE GL18484 OS=Drosophila persimilis GN=GL18484 PE=4 SV=1 Length = 1816
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -3
Query: 121 PPGPAPAPLHVSVAPAAKRPPSAGFSQRLPSPAHTSLTLS 2 PP PAP + V PAA S G S+RLP A+ SL+ S Sbjct: 1206 PPAPAPVVVPVQPEPAAAATESPGRSRRLPPVANASLSHS 1245
>tr|B7FI59|B7FI59_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 275
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 15/72 (20%) Frame = -3
Query: 187 HPPKNPCTHHSSWVRRWHNIVLP-----PGPAPAPLHVSV------APAAKRPPSAGFSQ 41 HPP N HH H+I P P P+P+P+H + AP +PP+ G Sbjct: 41 HPPANAPHHHHH-----HHIHSPTPAPTPTPSPSPIHTPLHPPYHSAPVPAKPPTHGHHH 95
Query: 40 R----LPSPAHT 17 P+P HT Sbjct: 96 HPHPPAPTPVHT 107
>tr|A2Y6X5|A2Y6X5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20780 PE=4 SV=1 Length = 522
Score = 35.0 bits (79), Expect = 1.9 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Frame = -3
Query: 157 SSWVRRWHNIVLPPGPAPAPLHVSVAPA-AKRPPSAGFSQRLPS-PAH 20 SSW W +I+L P+ LH+ +AP AK+P FS P+ P H Sbjct: 386 SSWDASWPSILLDAAPSLKTLHIHIAPRDAKKPTGGEFSWHHPTVPLH 433
>tr|Q6L5I1|Q6L5I1_ORYSJ Os05g0536800 protein OS=Oryza sativa subsp. japonica GN=OJ1741_B01.13 PE=4 SV=1 Length = 522
Score = 34.7 bits (78), Expect = 2.5 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -3
Query: 157 SSWVRRWHNIVLPPGPAPAPLHVSVAPA-AKRPPSAGFSQRLPS-PAH 20 SSW W I+L P+ LH+ +AP AK+P FS P+ P H Sbjct: 386 SSWDASWPRILLDAAPSLKTLHIHIAPRDAKKPTGGEFSWHHPTVPLH 433
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