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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917734
Clone id YMU001_000104_G06
Library
Length 163
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TCCTGATGGTCGTGCATTGGACCGTGTCATGTCTGACTATGGTGAGGAAGTAGTGACCGC
TCTCGGCAGTGAAGTAGACAGATTAGAAAGAGAGATCCAGAGACTGGTACCAGGAATTCG
ACATGTAGATATTGAAACCCACAATCCAAATGGACCTTTTCCT
■■Homology search results ■■ -
sp_hit_id Q8H1G3
Definition sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana
Align length 53
Score (bit) 79.0
E-value 7.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917734|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G06.
         (163 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis ...    79   7e-15
sp|Q5R4H0|ZNT9_PONAB Zinc transporter 9 OS=Pongo abelii GN=SLC30...    47   4e-05
sp|Q5IRJ6|ZNT9_MOUSE Zinc transporter 9 OS=Mus musculus GN=Slc30...    47   4e-05
sp|Q6PML9|ZNT9_HUMAN Zinc transporter 9 OS=Homo sapiens GN=SLC30...    47   4e-05
sp|Q5PQZ3|ZNT9_DANRE Zinc transporter 9 OS=Danio rerio GN=slc30a...    47   4e-05
sp|Q6DCE3|ZNT9_XENLA Zinc transporter 9 OS=Xenopus laevis GN=slc...    46   5e-05
sp|A0JNC0|TMOD1_BOVIN Tropomodulin-1 OS=Bos taurus GN=TMOD1 PE=2...    32   0.76 
sp|P70567|TMOD1_RAT Tropomodulin-1 OS=Rattus norvegicus GN=Tmod1...    32   0.99 
sp|P49813|TMOD1_MOUSE Tropomodulin-1 OS=Mus musculus GN=Tmod1 PE...    32   0.99 
sp|P28289|TMOD1_HUMAN Tropomodulin-1 OS=Homo sapiens GN=TMOD1 PE...    32   0.99 
sp|A5EES7|MTND_BRASB Acireductone dioxygenase OS=Bradyrhizobium ...    29   8.4  

>sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis
           thaliana GN=MTPC4 PE=2 SV=1
          Length = 457

 Score = 79.0 bits (193), Expect = 7e-15
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPFP 163
           D  A+  +MS+YGEEVVTALGSEVDRLE+EIQ LVPGI+HVDIE HNP    P
Sbjct: 403 DDSAMLNIMSNYGEEVVTALGSEVDRLEKEIQELVPGIQHVDIEAHNPTPTDP 455


>sp|Q5R4H0|ZNT9_PONAB Zinc transporter 9 OS=Pongo abelii GN=SLC30A9
           PE=2 SV=1
          Length = 569

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 17  LDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIE 136
           L+  M  +GE ++  LG+EVDRLE+E+++  P +RHVD+E
Sbjct: 528 LETFMLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLE 567


>sp|Q5IRJ6|ZNT9_MOUSE Zinc transporter 9 OS=Mus musculus GN=Slc30a9
           PE=1 SV=2
          Length = 567

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 17  LDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIE 136
           L+  M  +GE ++  LG+EVDRLE+E+++  P +RHVD+E
Sbjct: 526 LEAFMLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLE 565


>sp|Q6PML9|ZNT9_HUMAN Zinc transporter 9 OS=Homo sapiens GN=SLC30A9
           PE=2 SV=1
          Length = 568

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 17  LDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIE 136
           L+  M  +GE ++  LG+EVDRLE+E+++  P +RHVD+E
Sbjct: 527 LETFMLKHGENIIDTLGAEVDRLEKELKKRNPEVRHVDLE 566


>sp|Q5PQZ3|ZNT9_DANRE Zinc transporter 9 OS=Danio rerio GN=slc30a9
           PE=2 SV=1
          Length = 573

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 17  LDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIE 136
           L+  M  +GE ++  LG+EVDRLE+E+++  P +RHVD+E
Sbjct: 532 LENFMLKHGENIIDTLGAEVDRLEKELKQRNPEVRHVDLE 571


>sp|Q6DCE3|ZNT9_XENLA Zinc transporter 9 OS=Xenopus laevis
           GN=slc30a9 PE=2 SV=1
          Length = 559

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 17  LDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIE 136
           L+  M  +GE ++  LG+EVDRLE+E+++  P +RHVD+E
Sbjct: 518 LEAFMLKHGENIIDTLGAEVDRLEKELKQRNPEVRHVDLE 557


>sp|A0JNC0|TMOD1_BOVIN Tropomodulin-1 OS=Bos taurus GN=TMOD1 PE=2
           SV=1
          Length = 359

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 20  DRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPF 160
           D ++    EE +  L +E+D L+ +   L  G+R  D  T  P GPF
Sbjct: 16  DEILGGLTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPF 62


>sp|P70567|TMOD1_RAT Tropomodulin-1 OS=Rattus norvegicus GN=Tmod1
           PE=2 SV=1
          Length = 359

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 20  DRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPF 160
           D ++    EE +  L +E+D L+ +   L  G+R  D  T  P GPF
Sbjct: 16  DEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPF 62


>sp|P49813|TMOD1_MOUSE Tropomodulin-1 OS=Mus musculus GN=Tmod1 PE=2
           SV=1
          Length = 359

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 20  DRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPF 160
           D ++    EE +  L +E+D L+ +   L  G+R  D  T  P GPF
Sbjct: 16  DEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPF 62


>sp|P28289|TMOD1_HUMAN Tropomodulin-1 OS=Homo sapiens GN=TMOD1 PE=1
           SV=1
          Length = 359

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +2

Query: 20  DRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPF 160
           D ++    EE +  L +E+D L+ +   L  G+R  D  T  P GPF
Sbjct: 16  DEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGPF 62
tr_hit_id A9T1R0
Definition tr|A9T1R0|A9T1R0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 53
Score (bit) 91.7
E-value 2.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917734|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G06.
         (163 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T1R0|A9T1R0_PHYPA Predicted protein OS=Physcomitrella paten...    92   2e-17
tr|A7Q458|A7Q458_VITVI Chromosome chr9 scaffold_49, whole genome...    89   1e-16
tr|Q7XVV0|Q7XVV0_ORYSA OSJNBa0035B13.1 protein OS=Oryza sativa G...    76   1e-12
tr|Q0JEC1|Q0JEC1_ORYSJ Os04g0298200 protein OS=Oryza sativa subs...    76   1e-12
tr|B8AS09|B8AS09_ORYSI Putative uncharacterized protein OS=Oryza...    76   1e-12
tr|B4FWX3|B4FWX3_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|A4RQQ8|A4RQQ8_OSTLU CDF family transporter: cation efflux OS=...    57   5e-07
tr|Q01GU4|Q01GU4_OSTTA Membrane protein HUEL (Cation efflux supe...    55   1e-06
tr|A8J2F6|A8J2F6_CHLRE CDF transporter, membrane protein (Fragme...    55   2e-06
tr|A7S785|A7S785_NEMVE Predicted protein OS=Nematostella vectens...    49   1e-04
tr|Q7SZY7|Q7SZY7_DANRE Novel protein similar to human chromosome...    47   6e-04
tr|B2RU82|B2RU82_MOUSE Solute carrier family 30 (Zinc transporte...    47   6e-04
tr|B5U335|B5U335_PIG Solute carrier family 30 member 9 OS=Sus sc...    47   6e-04
tr|B4DSU2|B4DSU2_HUMAN cDNA FLJ50854, highly similar to Homo sap...    47   6e-04
tr|B2R745|B2R745_HUMAN cDNA, FLJ93277, highly similar to Homo sa...    47   6e-04
tr|A8X9R9|A8X9R9_CAEBR Putative uncharacterized protein OS=Caeno...    45   0.002
tr|B7QBP7|B7QBP7_IXOSC Zinc transporter, putative OS=Ixodes scap...    44   0.003
tr|Q4RTG8|Q4RTG8_TETNG Chromosome 1 SCAF14998, whole genome shot...    44   0.004
tr|B4JVC1|B4JVC1_DROGR GH22699 OS=Drosophila grimshawi GN=GH2269...    44   0.004
tr|B3RX82|B3RX82_TRIAD Putative uncharacterized protein OS=Trich...    43   0.009
tr|A6G134|A6G134_9DELT Predicted Co/Zn/Cd cation transporter OS=...    42   0.015
tr|A6C709|A6C709_9PLAN Cation efflux protein OS=Planctomyces mar...    42   0.015
tr|B3MCU6|B3MCU6_DROAN GF13401 OS=Drosophila ananassae GN=GF1340...    42   0.015
tr|B4QDF0|B4QDF0_DROSI GD10910 OS=Drosophila simulans GN=GD10910...    42   0.020
tr|B4P505|B4P505_DROYA GE12486 OS=Drosophila yakuba GN=GE12486 P...    42   0.020
tr|B4HPM6|B4HPM6_DROSE GM21415 OS=Drosophila sechellia GN=GM2141...    42   0.020
tr|B3NRX1|B3NRX1_DROER GG20327 OS=Drosophila erecta GN=GG20327 P...    42   0.020
tr|A1Z936|A1Z936_DROME CG8632, isoform A OS=Drosophila melanogas...    42   0.020
tr|A1Z935|A1Z935_DROME CG8632, isoform B OS=Drosophila melanogas...    42   0.020
tr|B6MIV8|B6MIV8_BRAFL Putative uncharacterized protein OS=Branc...    41   0.026

>tr|A9T1R0|A9T1R0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_138991 PE=4 SV=1
          Length = 359

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPFP 163
           DG  LDRVM++YGEEVV+A+G EVDRLE++IQ+LVPGIRHVDIE HNPNGP P
Sbjct: 300 DGSVLDRVMAEYGEEVVSAVGCEVDRLEKDIQKLVPGIRHVDIEAHNPNGPTP 352


>tr|A7Q458|A7Q458_VITVI Chromosome chr9 scaffold_49, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029545001
           PE=4 SV=1
          Length = 459

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 43/53 (81%), Positives = 46/53 (86%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNGPFP 163
           D  AL R+MS+YGEEVVTALGSEVDRLE+EIQ LVPGIRHVDIE HNP GP P
Sbjct: 407 DDSALLRMMSNYGEEVVTALGSEVDRLEKEIQELVPGIRHVDIEAHNPTGPSP 459


>tr|Q7XVV0|Q7XVV0_ORYSA OSJNBa0035B13.1 protein OS=Oryza sativa
           GN=OSJNBa0035B13.1 PE=4 SV=3
          Length = 334

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNG 154
           D   L RVMS+YGE+VV ALG EVDRLE EIQ++VPGI+HVDIE HNP G
Sbjct: 282 DDTELIRVMSNYGEDVVEALGYEVDRLESEIQKIVPGIKHVDIEAHNPEG 331


>tr|Q0JEC1|Q0JEC1_ORYSJ Os04g0298200 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0298200 PE=4 SV=1
          Length = 334

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNG 154
           D   L RVMS+YGE+VV ALG EVDRLE EIQ++VPGI+HVDIE HNP G
Sbjct: 282 DDTELIRVMSNYGEDVVEALGYEVDRLESEIQKIVPGIKHVDIEAHNPEG 331


>tr|B8AS09|B8AS09_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15280 PE=4 SV=1
          Length = 472

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNG 154
           D   L RVMS+YGE+VV ALG EVDRLE EIQ++VPGI+HVDIE HNP G
Sbjct: 420 DDTELIRVMSNYGEDVVEALGYEVDRLESEIQKIVPGIKHVDIEAHNPEG 469


>tr|B4FWX3|B4FWX3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 125

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETHNPNG 154
           D   L RVM++YGE+VV ALG EVDRLE EIQ+LVPGI+HVDIE HNP G
Sbjct: 68  DDTELLRVMANYGEDVVEALGYEVDRLESEIQKLVPGIKHVDIEAHNPEG 117


>tr|A4RQQ8|A4RQQ8_OSTLU CDF family transporter: cation efflux
           OS=Ostreococcus lucimarinus (strain CCE9901)
           GN=OSTLU_39741 PE=4 SV=1
          Length = 345

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETH 142
           D +A+D  +S YGEE+V A+G EVDR+E+EI ++ P I +VDIET+
Sbjct: 300 DAQAMDGALSFYGEEIVQAVGDEVDRMEKEIVKIEPSIHYVDIETN 345


>tr|Q01GU4|Q01GU4_OSTTA Membrane protein HUEL (Cation efflux
           superfamily) (ISS) OS=Ostreococcus tauri GN=Ot01g01390
           PE=4 SV=1
          Length = 481

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 25/46 (54%), Positives = 34/46 (73%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIETH 142
           D +ALD  +  YGE++V A+G EVDRLE+EI  + P I +VDIET+
Sbjct: 436 DPKALDAALVQYGEDIVQAVGDEVDRLEKEIVEIEPSIHYVDIETN 481


>tr|A8J2F6|A8J2F6_CHLRE CDF transporter, membrane protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=MTP5 PE=4 SV=1
          Length = 472

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 36/45 (80%)
 Frame = +2

Query: 5   DGRALDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIET 139
           D  AL+ ++  YG E+++A+G+EVDR+E EIQ+L PGI +VD+ET
Sbjct: 356 DRAALEALVQSYGRELISAVGAEVDRIEGEIQKLNPGILYVDLET 400


>tr|A7S785|A7S785_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g207889 PE=4 SV=1
          Length = 389

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 31/40 (77%)
 Frame = +2

Query: 17  LDRVMSDYGEEVVTALGSEVDRLEREIQRLVPGIRHVDIE 136
           +++ M +YGE+V+  LG +VDR+ER I++  P +RHVD+E
Sbjct: 348 MEQFMLEYGEQVIDVLGQQVDRIERNIKKKSPEVRHVDLE 387