BP917737
Clone id YMU001_000104_G09
Library
Length 425
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000104_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGTGTAGGTTCATAAGGTCCTCAAGCTTACTGAAAGCTTTTCTTTGGTTGAAATCTCGGA
ATGGTTCCTTCCTTTCTGTCGTCCTACCCGCAATAGCACGTAATTTGTTGGTGAACTACC
GGATACGATATCAATAGTTGACCTTCCGGATGGTTGAGCAAACCAATTCATCGCATAAAG
CAATGTTTCAACTCAATTCTACTCTCATAAACACTTGAGAGTGATTGTCCTGGTTAGACA
CATGCATATCTTGTGCATAAAAGCAATACACAGTTTATAGAGTTCCTCAAAGATTAAACT
TTGATCAAAGACCTACCCCCTCACTTAAAGTTCGAGGGTCTTTTGTTCAAAATCTCACAA
GTTAGATTGAATTCTCTTACTCCAAACTTTCTCCGGATAGCAATGTATCCTTCGAGGAGA
GGTAA
■■Homology search results ■■ -
sp_hit_id A5CDS8
Definition sp|A5CDS8|MNMG_ORITB tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Orientia tsutsugamushi (strain Boryong)
Align length 30
Score (bit) 32.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917737|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G09.
(425 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5CDS8|MNMG_ORITB tRNA uridine 5-carboxymethylaminomethyl mod... 32 1.0
sp|O74676|CDR4_CANAL ABC transporter CDR4 OS=Candida albicans GN... 29 6.8
sp|P48506|GSH1_HUMAN Glutamate--cysteine ligase catalytic subuni... 29 8.8

>sp|A5CDS8|MNMG_ORITB tRNA uridine 5-carboxymethylaminomethyl
modification enzyme mnmG OS=Orientia tsutsugamushi
(strain Boryong) GN=mnmG PE=3 SV=1
Length = 622

Score = 32.0 bits (71), Expect = 1.0
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3

Query: 261 KQYTVYRVPQRLNFDQRPTPSLKVRGSFVQ 350
KQ Y++PQ LN+DQ P+ S++VR Q
Sbjct: 553 KQEETYQIPQDLNYDQIPSLSIEVREKLKQ 582


>sp|O74676|CDR4_CANAL ABC transporter CDR4 OS=Candida albicans GN=CDR4
PE=3 SV=1
Length = 1490

Score = 29.3 bits (64), Expect = 6.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +3

Query: 234 LDTCISCA*KQYTVYRVPQRLNFDQRPTPSLKVRGSFV--QNLTS*IEFSYSKLS 392
+D ++CA K+Y + PQ Q P +KV G ++ +N T+ EF K++
Sbjct: 1383 VDAPVTCAAKEYLRFSPPQGYTCMQYMEPYMKVAGGYLLNENSTTECEFCTMKVT 1437


>sp|P48506|GSH1_HUMAN Glutamate--cysteine ligase catalytic subunit
OS=Homo sapiens GN=GCLC PE=1 SV=2
Length = 637

Score = 28.9 bits (63), Expect = 8.8
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2

Query: 259 YAQDMHVSNQDNHSQVFMRVELS*NIALCDELVCSTIRKVNY 134
Y QD ++++ N+S + +++ + C EL+ S RKV Y
Sbjct: 587 YKQDSVITDEMNYSLILKCNQIANELCECPELLGSAFRKVKY 628


tr_hit_id A7QJJ9
Definition tr|A7QJJ9|A7QJJ9_VITVI Chromosome chr8 scaffold_106, whole genome shotgun sequence OS=Vitis vinifera
Align length 61
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917737|Adiantum capillus-veneris mRNA, clone:
YMU001_000104_G09.
(425 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QJJ9|A7QJJ9_VITVI Chromosome chr8 scaffold_106, whole genom... 33 7.0

>tr|A7QJJ9|A7QJJ9_VITVI Chromosome chr8 scaffold_106, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00000668001
PE=4 SV=1
Length = 308

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -3

Query: 399 YPEKVWSKRIQSNL*DFEQKTLEL*VRG*VFDQSLIFEELYKLCIAFMHKICMCLTRTIT 220
+ E VW K ++ N FE L L V+ Q +F EL K + MH+IC T+
Sbjct: 48 FTELVWQKLVEENQDFFEAYHLRLMVK----HQINVFNELLKQQVDLMHRICPARVDTVP 103

Query: 219 L 217
+
Sbjct: 104 I 104