BP917739 |
Clone id |
YMU001_000104_G11 |
Library |
YMU01 |
Length |
384 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000104_G11. |
Accession |
BP917739 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL117Contig1 |
Sequence |
CTACACTATTACAGAGCCCAGTTTAGAAAACAGATCACGAGAAAAAGCTCAAAAAACTCC ACCTCATAGTAGTGACTGAAAAGTTTGCATCAAAATCTAAAATCCCTCCCTACCTGCGTT ACAGCTCTCCCAGAGGACAATGTTAACCCCATAATTACATCGGGATTCCTTGCTTTAAGG ATCTAAGCGATTTGGTGCACGGGCTCTTCTTTGCTGACTGATTTTGGGATGAGTTCTTCT TCATCCTTGGGACTGTGAATTGTGACATTGTCAGGTAAAGGAATAGCCGGATCTTGCTTG CCCTTGGGATCCCAATCCAACATGATCTTGACCTTGATGCCCAAGACTCCCTGTCTCAAA AGCACGTGGCGAACTGCAGAGTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FJA6 |
Definition |
sp|Q9FJA6|RS33_ARATH 40S ribosomal protein S3-3 OS=Arabidopsis thaliana |
Align length |
52 |
Score (bit) |
85.5 |
E-value |
7.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P4S2 |
Definition |
tr|A7P4S2|A7P4S2_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
53 |
Score (bit) |
97.4 |
E-value |
3.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917739|Adiantum capillus-veneris mRNA, clone: YMU001_000104_G11. (384 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P4S2|A7P4S2_VITVI Chromosome chr4 scaffold_6, whole genome ... 97 3e-19 tr|A5AXX8|A5AXX8_VITVI Putative uncharacterized protein OS=Vitis... 97 5e-19 tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains ... 96 9e-19 tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subs... 96 9e-19 tr|A6N0S5|A6N0S5_ORYSI 40S ribosomal protein S3-a (Fragment) OS=... 96 9e-19 tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza... 96 9e-19 tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medic... 95 2e-18 tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medic... 95 2e-18 tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genom... 95 2e-18 tr|Q75G91|Q75G91_ORYSJ Os03g0577000 protein OS=Oryza sativa subs... 94 3e-18 tr|Q10HT1|Q10HT1_ORYSJ 40S ribosomal protein S3, putative, expre... 94 3e-18 tr|A6N030|A6N030_ORYSI 40S ribosomal protein S3 (Fragment) OS=Or... 94 3e-18 tr|A2XIT7|A2XIT7_ORYSI Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|B6TM40|B6TM40_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 94 3e-18 tr|B3TLR8|B3TLR8_ELAGV Ribosomal protein OS=Elaeis guineensis va... 94 3e-18 tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome ... 94 3e-18 tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea... 94 4e-18 tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea m... 93 6e-18 tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella paten... 93 6e-18 tr|B6U634|B6U634_MAIZE Putative uncharacterized protein OS=Zea m... 92 1e-17 tr|B6TB97|B6TB97_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 92 1e-17 tr|Q7X9L6|Q7X9L6_WHEAT 40S ribosomal protein (Fragment) OS=Triti... 92 2e-17 tr|Q8L804|Q8L804_WHEAT Putative 40S ribosomal protein S3 OS=Trit... 91 3e-17 tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea... 91 4e-17 tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solan... 90 5e-17 tr|Q2PYZ0|Q2PYZ0_SOLTU 40S ribosomal protein-like protein OS=Sol... 90 5e-17 tr|A9PBQ6|A9PBQ6_POPTR Putative uncharacterized protein OS=Popul... 90 5e-17 tr|A9PAW1|A9PAW1_POPTR Putative uncharacterized protein OS=Popul... 90 5e-17 tr|A9PHW0|A9PHW0_POPTR Putative uncharacterized protein OS=Popul... 89 8e-17
>tr|A7P4S2|A7P4S2_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032258001 PE=3 SV=1 Length = 208
Score = 97.4 bits (241), Expect = 3e-19 Identities = 45/53 (84%), Positives = 48/53 (90%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIP 225 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PK+EEE +P Sbjct: 142 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYVP 194
>tr|A5AXX8|A5AXX8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022106 PE=3 SV=1 Length = 252
Score = 96.7 bits (239), Expect = 5e-19 Identities = 45/53 (84%), Positives = 47/53 (88%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIP 225 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH PK+EEE +P Sbjct: 186 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHXPKEEEEYVP 238
>tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains C-terminal domain OS=Oryza sativa GN=OSJNBb0024A20.19 PE=3 SV=1 Length = 233
Score = 95.9 bits (237), Expect = 9e-19 Identities = 48/62 (77%), Positives = 52/62 (83%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIPKSVSKEE 204 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PKDE+E K ++ E Sbjct: 171 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDE-FSKPLTAEI 229
Query: 203 PV 198 PV Sbjct: 230 PV 231
>tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018L13.2 PE=2 SV=1 Length = 233
Score = 95.9 bits (237), Expect = 9e-19 Identities = 48/62 (77%), Positives = 52/62 (83%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIPKSVSKEE 204 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PKDE+E K ++ E Sbjct: 171 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDE-FSKPLTAEI 229
Query: 203 PV 198 PV Sbjct: 230 PV 231
>tr|A6N0S5|A6N0S5_ORYSI 40S ribosomal protein S3-a (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1 Length = 85
Score = 95.9 bits (237), Expect = 9e-19 Identities = 48/62 (77%), Positives = 52/62 (83%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIPKSVSKEE 204 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PKDE+E K ++ E Sbjct: 23 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDE-FSKPLTAEI 81
Query: 203 PV 198 PV Sbjct: 82 PV 83
>tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26820 PE=3 SV=1 Length = 233
Score = 95.9 bits (237), Expect = 9e-19 Identities = 48/62 (77%), Positives = 52/62 (83%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIPKSVSKEE 204 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PKDE+E K ++ E Sbjct: 171 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDE-FSKPLTAEI 229
Query: 203 PV 198 PV Sbjct: 230 PV 231
>tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162268 PE=3 SV=1 Length = 230
Score = 95.1 bits (235), Expect = 2e-18 Identities = 48/61 (78%), Positives = 50/61 (81%), Gaps = 1/61 (1%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELIPK-SVSKE 207 DSAVRHV+LRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH PK+EEE K V KE Sbjct: 169 DSAVRHVMLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEEEEFAHKPHVGKE 228
Query: 206 E 204 E Sbjct: 229 E 229
>tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 239
Score = 94.7 bits (234), Expect = 2e-18 Identities = 45/52 (86%), Positives = 47/52 (90%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELI 228 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PK+EEE I Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYI 220
>tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 239
Score = 94.7 bits (234), Expect = 2e-18 Identities = 45/52 (86%), Positives = 47/52 (90%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELI 228 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PK+EEE I Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYI 220
>tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016476001 PE=3 SV=1 Length = 234
Score = 94.7 bits (234), Expect = 2e-18 Identities = 45/52 (86%), Positives = 47/52 (90%) Frame = -2
Query: 383 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQDPAIPLPDNVTIHSPKDEEELI 228 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQ P PLPD VTIH+PK+EEE I Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYI 220
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