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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917750
Clone id YMU001_000105_A02
Library
Length 462
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATTCGCGGCCGCGAATGAGCCATATCCCGCCTTAAGCCTGGCATCAGGAAACTTTCCGTT
TGTACAGAGGCAAGAGCTTTTGTGATTAACTTGCAAAATTGTGAACTCGTTTTAGACGTG
AACAAGCAGTTGCTATGCTTGGGAAGTCAGCATCAGGAGCGGACTCGTGTGTTGCTGAAT
AGTGGTTCTTAGTAACAAAAATCTTTAGAGGTCTGCCTGCGACGGGAGCATCAGTAGAGT
TTCAAGCAAGTATCTTTGGCCTGATTGCCCTTTGCCCTGGATCTGGAGCGATGCATCATG
TTTGCAAAAAAGAAACTGGCATGCACCAAGAGGTGCTGGGTGCCTATGTGAAAACCACAA
CAGAGTTGAGGGAAACATTTGAAGGGAAGATGGATAGAGTGCAGGGATGCTGCATGCAGA
ATGTTCCAGAAGTTATAGTTATTGAAGATGATAATGGAGATA
■■Homology search results ■■ -
sp_hit_id Q9RW68
Definition sp|Q9RW68|Y801_DEIRA Uncharacterized carotenoid cyclase DR_0801 OS=Deinococcus radiodurans
Align length 73
Score (bit) 32.3
E-value 0.93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917750|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_A02.
         (446 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9RW68|Y801_DEIRA Uncharacterized carotenoid cyclase DR_0801 ...    32   0.93 
sp|P32768|FLO1_YEAST Flocculation protein FLO1 OS=Saccharomyces ...    32   1.2  
sp|A5IDN6|IDI2_LEGPC Isopentenyl-diphosphate delta-isomerase OS=...    30   3.5  
sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1     29   7.8  

>sp|Q9RW68|Y801_DEIRA Uncharacterized carotenoid cyclase DR_0801
           OS=Deinococcus radiodurans GN=DR_0801 PE=3 SV=1
          Length = 410

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = -1

Query: 356 PSTLLWFSHRHPAP---LGACQFLFCKHDASLQIQGKGQSGQRYLLETLLML----PSQA 198
           P +++W  +R PAP    G   FL+  H            G RY +E   ++    P++A
Sbjct: 174 PGSMVWMDYRTPAPELKRGEATFLYAMH----------LGGDRYFVEETSLIARPAPTRA 223

Query: 197 DL*RFLLLRTTIQ 159
           +L R LL R + Q
Sbjct: 224 ELRRRLLARLSAQ 236


>sp|P32768|FLO1_YEAST Flocculation protein FLO1 OS=Saccharomyces
            cerevisiae GN=FLO1 PE=3 SV=4
          Length = 1537

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 435  SSSITITSGTFCMQHPCTLSIFPSNVSLNSVVVF-T*APSTSWCMPVSFLQT 283
            S   T+ + T C  H CT SI P+ VS  +V V       T+WC P+S  +T
Sbjct: 1230 SEQTTLVTVTSCESHVCTESISPAIVSTATVTVSGVTTEYTTWC-PISTTET 1280


>sp|A5IDN6|IDI2_LEGPC Isopentenyl-diphosphate delta-isomerase
           OS=Legionella pneumophila (strain Corby) GN=fni PE=3
           SV=1
          Length = 342

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 171 NHYSATHESAPDADFPSIATACSRLKR 91
           +H+S  HE+ PD DF  I+    RLK+
Sbjct: 33  DHFSLVHEALPDLDFKDISIQSIRLKK 59


>sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=1
          Length = 4998

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
 Frame = +1

Query: 259  PWIWSDASC-----LQKRNWHAP----RGAGCLCENHN-RVEGNI*REDG*SAGMLHAEC 408
            PW W D SC     L+ R+  +P     G  C+ E H+ R    +  E+G  AGM    C
Sbjct: 3859 PWSWCDRSCGGGRSLRSRSCSSPPPKNGGTSCVGERHHVRPCNPMPCEEGCPAGMEMVSC 3918

Query: 409  SRSYSY 426
            +    Y
Sbjct: 3919 ANHCPY 3924
tr_hit_id A5BQV3
Definition tr|A5BQV3|A5BQV3_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 44
Score (bit) 34.3
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917750|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_A02.
         (446 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BQV3|A5BQV3_VITVI Putative uncharacterized protein OS=Vitis...    34   3.1  
tr|B4RH92|B4RH92_PHEZH Putative uncharacterized protein OS=Pheny...    33   5.3  
tr|Q0UY76|Q0UY76_PHANO Putative uncharacterized protein OS=Phaeo...    33   5.3  
tr|Q0S737|Q0S737_RHOSR ABC phosphate transporter, permease compo...    33   7.0  
tr|Q8S230|Q8S230_ORYSJ Putative ammonium transporter (Putative u...    33   7.0  
tr|Q0JI12|Q0JI12_ORYSJ Os01g0831900 protein OS=Oryza sativa subs...    33   7.0  
tr|B8ABN3|B8ABN3_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.0  
tr|B0T0D4|B0T0D4_CAUSK Peptidoglycan-binding domain 1 protein OS...    33   9.1  

>tr|A5BQV3|A5BQV3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031950 PE=4 SV=1
          Length = 649

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
 Frame = -2

Query: 382 SIHLPFKC-----FPQLCCGFHIGTQHLLVHASFFFANMMHRSR 266
           ++H+PF+      F Q+  GF+ G  HL++ A  +F + +HR +
Sbjct: 423 ALHIPFQLEDREQFKQIYMGFYFGPHHLIMAALLYFEDKVHRKK 466


>tr|B4RH92|B4RH92_PHEZH Putative uncharacterized protein
           OS=Phenylobacterium zucineum (strain HLK1) GN=PHZ_c2631
           PE=4 SV=1
          Length = 158

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +1

Query: 247 DCPLPWI---WSDASCLQKRNWHAPRGAGCLCENHNRVEG 357
           D PLP +   W DA  + + NW APRG  C+  +H   EG
Sbjct: 15  DAPLPLVFRMWEDA--VHRANWWAPRGCRCIHFSHEFREG 52


>tr|Q0UY76|Q0UY76_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_03288 PE=4 SV=1
          Length = 323

 Score = 33.5 bits (75), Expect = 5.3
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 244 PDCPLPWIWSDASCLQKRNWHAPRGAGCLCENHNRVEG 357
           PD PL W+W    C   RN+H      CL + HN   G
Sbjct: 63  PDSPLSWMWQCHQC--HRNYHLGATRRCLDDGHNFCSG 98


>tr|Q0S737|Q0S737_RHOSR ABC phosphate transporter, permease
           component OS=Rhodococcus sp. (strain RHA1) GN=pstA PE=3
           SV=1
          Length = 302

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 167 WFLVTKIFRGLPATGASVEFQASIFGLIALCPGSGAMH 280
           W LVT + +G+PA  ++  F  S+ GL +   G G  H
Sbjct: 45  WVLVTAVIKGIPALTSATWFTHSLSGLTSSAAGGGIYH 82


>tr|Q8S230|Q8S230_ORYSJ Putative ammonium transporter (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=P0446G04.40 PE=4 SV=1
          Length = 497

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 25/89 (28%), Positives = 40/89 (44%)
 Frame = +2

Query: 113 VAMLGKSASGADSCVAE*WFLVTKIFRGLPATGASVEFQASIFGLIALCPGSGAMHHVCK 292
           VA+L  + S A S +   W  +  IF G P+   +V  Q  + GL+ + PG+G +H    
Sbjct: 265 VAVLNTNVSAATSLLT--WTCLDVIFFGKPSVIGAV--QGMMTGLVCITPGAGLVHTWSA 320

Query: 293 KETGMHQEVLGAYVKTTTELRETFEGKMD 379
              GM    +  +       + TF  K+D
Sbjct: 321 MLMGMFAGSVPWFTMMILHKKSTFLMKVD 349


>tr|Q0JI12|Q0JI12_ORYSJ Os01g0831900 protein OS=Oryza sativa subsp.
           japonica GN=Os01g0831900 PE=4 SV=1
          Length = 501

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 25/89 (28%), Positives = 40/89 (44%)
 Frame = +2

Query: 113 VAMLGKSASGADSCVAE*WFLVTKIFRGLPATGASVEFQASIFGLIALCPGSGAMHHVCK 292
           VA+L  + S A S +   W  +  IF G P+   +V  Q  + GL+ + PG+G +H    
Sbjct: 269 VAVLNTNVSAATSLLT--WTCLDVIFFGKPSVIGAV--QGMMTGLVCITPGAGLVHTWSA 324

Query: 293 KETGMHQEVLGAYVKTTTELRETFEGKMD 379
              GM    +  +       + TF  K+D
Sbjct: 325 MLMGMFAGSVPWFTMMILHKKSTFLMKVD 353


>tr|B8ABN3|B8ABN3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04307 PE=4 SV=1
          Length = 497

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 25/89 (28%), Positives = 40/89 (44%)
 Frame = +2

Query: 113 VAMLGKSASGADSCVAE*WFLVTKIFRGLPATGASVEFQASIFGLIALCPGSGAMHHVCK 292
           VA+L  + S A S +   W  +  IF G P+   +V  Q  + GL+ + PG+G +H    
Sbjct: 265 VAVLNTNVSAATSLLT--WTCLDVIFFGKPSVIGAV--QGMMTGLVCITPGAGLVHTWSA 320

Query: 293 KETGMHQEVLGAYVKTTTELRETFEGKMD 379
              GM    +  +       + TF  K+D
Sbjct: 321 MLMGMFAGSVPWFTMMILHKKSTFLMKVD 349


>tr|B0T0D4|B0T0D4_CAUSK Peptidoglycan-binding domain 1 protein
           OS=Caulobacter sp. (strain K31) GN=Caul_1450 PE=4 SV=1
          Length = 997

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +2

Query: 104 EQAVAMLGKSASGADSCVAE*WFLVTKIFRGLPATGAS-VEFQASIFGLIALCPGSGAMH 280
           ++ VA LG+    A+S  AE           L A GAS       +  +    PG G   
Sbjct: 229 DEVVARLGERLEAAESRTAE----------ALQALGASFTALDGRLRTVETSNPGEGVQK 278

Query: 281 HVCKKETGMHQEVLGAYVKTTTELRETFEGKMDRVQ 388
            + +   G+ Q +  A ++   +LR++ +G+ DR++
Sbjct: 279 RLDELSNGLTQRMEAARMEMAAKLRQSADGRFDRME 314