BP917755 |
Clone id |
YMU001_000105_A07 |
Library |
YMU01 |
Length |
465 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000105_A07. |
Accession |
BP917755 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1516Contig1 |
Sequence |
TTAAAGAAGGAAGCTTGGGCATAGATTGCATATGCACGGATCTTTCGAAGACGGGTATCA GGCACAAAAGTACTCAAACCAAAACCATTTCTCTGATCCTTTGCTATGAGAGAGGCCACA AATTCCACAGACCATGAAGGGAGCTCTTGGCATTCAAGCTGCCAAGATCTAATGGCCTCC GATAAAAATGTATGTACTAGGTGAATCTTGTCATTTACAGAACCCTCTCCTTCAAGAGAA AGGAGCTGCTCGAAGCAATGCGGCGATACAACAGCAAGATTGTAAGCTGCAATCAAATAC CGAGCCTGTGTCTGTGAGTCGAAGTCAAGTGTGCACAGTACGAGCAGGGAGAGAGCCCTG CATACAAAGGGGGTATGTGTAGAGGTCGATGCAGCGGCAGCACATTGTGGACTACAGAAG GCAGCTACCTGGCAAGTAGTGCAAAAGGACCAAGACCCATTTCCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZUM9 |
Definition |
sp|Q9ZUM9|ASHR2_ARATH Histone-lysine N-methyltransferase ASHR2 OS=Arabidopsis thaliana |
Align length |
145 |
Score (bit) |
75.1 |
E-value |
1.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AFY3 |
Definition |
tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
138 |
Score (bit) |
82.0 |
E-value |
1.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917755|Adiantum capillus-veneris mRNA, clone: YMU001_000105_A07. (465 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|A9TLI8|A9TLI8_PHYPA Predicted protein (Fragment) OS=Physcomit... 72 1e-11 tr|Q6ZCF6|Q6ZCF6_ORYSJ SET-domain transcriptional regulator-like... 37 0.63 tr|A2YSB4|A2YSB4_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.83 tr|Q6ZCF7|Q6ZCF7_ORYSJ Os08g0205300 protein OS=Oryza sativa subs... 36 1.1 tr|Q8KIP0|Q8KIP0_RHIEC Carbamoyltransferase protein OS=Rhizobium... 33 5.4 tr|Q0ZCD4|Q0ZCD4_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 33 5.4 tr|B0NYD1|B0NYD1_9CLOT Putative uncharacterized protein OS=Clost... 33 7.0 tr|A2RBH5|A2RBH5_ASPNC Similarity: the A. niger ORF shows strong... 33 7.2 tr|Q5R5M9|Q5R5M9_PONAB Putative uncharacterized protein DKFZp469... 33 9.1
>tr|A5AFY3|A5AFY3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031337 PE=4 SV=1 Length = 405
Score = 82.0 bits (201), Expect = 1e-14 Identities = 57/138 (41%), Positives = 76/138 (55%), Gaps = 10/138 (7%) Frame = -2
Query: 386 TSTHTPFVCRALSLL----VLCTLDFDSQTQARYLIAAYNLAVVSPHCFEQLLSLEG--- 228 +S+H+P+ C LSLL L + Q QAR+L+AAYNLA+VSP F LLSL+G Sbjct: 94 SSSHSPWACLTLSLLRASPSLSLSHSERQVQARFLVAAYNLAIVSPSHFHILLSLQGMAL 153
Query: 227 EGSVNDKIHLVHTFLSEAIRSWQLECQELPSWSVEFVASLIAKDQRNGFGL---STFVPD 57 S +D +H+ LS Q + +SVE +L+AKD+ N FGL P Sbjct: 154 PSSDSDAPTFLHSLLSSLSPP-----QGVAGFSVELTTALLAKDKLNAFGLMEPPALAPG 208
Query: 56 TRLRKIRAYAIYAQASFF 3 R +RAY IY +ASFF Sbjct: 209 GE-RSVRAYGIYPKASFF 225
>tr|A9TLI8|A9TLI8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_4377 PE=4 SV=1 Length = 377
Score = 72.0 bits (175), Expect = 1e-11 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 2/149 (1%) Frame = -2
Query: 443 CTTCQVXXXXXXXXXXXXSTSTHTPFVCRALSLLVLCTLDF--DSQTQARYLIAAYNLAV 270 C+ C +H VC +++L F + +T AR+LIAAYNLAV Sbjct: 63 CSACDGATFCGKSCFESARVGSHNTRVCSGIAMLQKSKDKFSLEHRTLARFLIAAYNLAV 122
Query: 269 VSPHCFEQLLSLEGEGSVNDKIHLVHTFLSEAIRSWQLECQELPSWSVEFVASLIAKDQR 90 P F +LL LEG+ + + +H F+ E +L+ S+E L+A+D Sbjct: 123 EDPLAFAKLLELEGQECDEEVVKSLHDFVVEIF--GKLDGGASLELSLELTGKLLARDAC 180
Query: 89 NGFGLSTFVPDTRLRKIRAYAIYAQASFF 3 N FGL RK+R YA++AQAS F Sbjct: 181 NTFGLMAPSCAGEERKVRGYAMFAQASMF 209
>tr|Q6ZCF6|Q6ZCF6_ORYSJ SET-domain transcriptional regulator-like protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0486F07.32-2 PE=4 SV=1 Length = 392
Score = 36.6 bits (83), Expect = 0.63 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Frame = -2
Query: 299 YLIAAYNLAVVSPHCFEQLLSLEGEGSVNDKIHLVHTFLSEAIRSWQLECQELPSWSVEF 120 +L++AY+L S L S + +H ++ + L P +S + Sbjct: 112 FLLSAYSLPEPSLRVLLSLSSAATPPPSDQDPGSLHAMVAALVPPQMLP----PGFSPDL 167
Query: 119 VASLIAKDQRNGFGL-STFVPDTR--LRKIRAYAIYAQAS 9 A+L++KD+ N F + + P+ LRK RAYA+Y +AS Sbjct: 168 TAALLSKDRTNSFSIMEPYRPEVPQPLRKARAYAVYPRAS 207
>tr|A2YSB4|A2YSB4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28216 PE=4 SV=1 Length = 392
Score = 36.2 bits (82), Expect = 0.83 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Frame = -2
Query: 299 YLIAAYNLAVVSPHCFEQLLSLEGEGSVNDKIHLVHTFLSEAIRSWQLECQELPSWSVEF 120 +L++AY+L S L S + +H ++ + L P +S + Sbjct: 112 FLLSAYSLPEPSLRVLLSLSSAATPPPRDQDPGSLHAMVTALVPPQMLP----PGFSPDL 167
Query: 119 VASLIAKDQRNGFGL-STFVPDTR--LRKIRAYAIYAQAS 9 A+L++KD+ N F + + P+ LRK RAYA+Y +AS Sbjct: 168 TAALLSKDRTNSFSIMEPYRPEVPQPLRKARAYAVYPRAS 207
>tr|Q6ZCF7|Q6ZCF7_ORYSJ Os08g0205300 protein OS=Oryza sativa subsp. japonica GN=P0486F07.32-1 PE=4 SV=1 Length = 331
Score = 35.8 bits (81), Expect = 1.1 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Frame = -2
Query: 140 PSWSVEFVASLIAKDQRNGFGL-STFVPDTR--LRKIRAYAIYAQAS 9 P +S + A+L++KD+ N F + + P+ LRK RAYA+Y +AS Sbjct: 100 PGFSPDLTAALLSKDRTNSFSIMEPYRPEVPQPLRKARAYAVYPRAS 146
>tr|Q8KIP0|Q8KIP0_RHIEC Carbamoyltransferase protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=RHE_PD00268 PE=4 SV=2 Length = 685
Score = 33.5 bits (75), Expect = 5.4 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Frame = -2
Query: 269 VSPHCFEQLLSLEGEGSVNDKIHLV-------HTFLSEAIRSWQLEC 150 +SP FEQL+ +EGE V D + + TFL+E + W+ C Sbjct: 612 ISPELFEQLIRIEGEALVGDILDGIAPVSGSRETFLNELRQIWEQRC 658
>tr|Q0ZCD4|Q0ZCD4_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1 Length = 1136
Score = 33.5 bits (75), Expect = 5.4 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = -2
Query: 338 LCTLDFDSQTQARYLIAAYNLAVVSPHCFEQLLSLEGEGSVNDKIHLVHTFLSEAIR--S 165 LCT+ + + L+A + + ++Q + E N+ L + E + S Sbjct: 184 LCTVKRKLNVKKKALLAEQEVDFIEKLVYDQCANTSNETEFNESEDLQMVYFQEESKASS 243
Query: 164 WQLECQELPSWSVEFVASLI 105 W+ + +ELP S+EF+ S + Sbjct: 244 WRPKIKELPPRSIEFIPSSV 263
>tr|B0NYD1|B0NYD1_9CLOT Putative uncharacterized protein OS=Clostridium sp. SS2/1 GN=CLOSS21_00691 PE=4 SV=1 Length = 365
Score = 33.1 bits (74), Expect = 7.0 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = -2
Query: 353 LSLLVLCTLDFDSQTQARYLIAAYNLAVVSPHCFEQL 243 +SL VLC L F + + R IA +NL++ P CFE + Sbjct: 279 VSLGVLCLLTFGKEYEERERIAKFNLSMGLPVCFEDI 315
>tr|A2RBH5|A2RBH5_ASPNC Similarity: the A. niger ORF shows strong similarity to EST an_0449 of A. niger OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An18g06740 PE=4 SV=1 Length = 235
Score = 33.1 bits (74), Expect = 7.2 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Frame = -1
Query: 195 TYIFIGGH*ILAA*MPRAPF---------MVCGICGLSHSKGSEKWFWFEYFCA*YPSSK 43 T + IG H + A+ + R P + CG+ GL+H W WF +F PSS+ Sbjct: 70 TALSIGSHIVYASNLRRFPIVKLSDPLFILSCGLVGLNH------WLWFRHFSQPLPSSR 123
>tr|Q5R5M9|Q5R5M9_PONAB Putative uncharacterized protein DKFZp469A1114 OS=Pongo abelii GN=DKFZp469A1114 PE=2 SV=1 Length = 788
Score = 32.7 bits (73), Expect = 9.1 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Frame = +2
Query: 191 YVLGESCHLQNPLLQEKGAARSNAAIQQQDCK--LQSNTEPVSVSRSQVCTVRAGREPCI 364 Y++GE L + G +S A+++ CK L + TE ++SR + + A + Sbjct: 319 YIMGEGKCLSQEKPRASGLLKSPASLKAHTCKQDLSNTTELATISRVNIDILPAKGRDSV 378
Query: 365 QRGYV*RSMQRQHIVDYRRQLPGK 436 G++ R Q +H+ D +L GK Sbjct: 379 SDGFI-RENQPRHL-DASNELGGK 400
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