BP917757
Clone id YMU001_000105_A10
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGTCAATGATAACCTTGCAGGTGTCAAACTTTGCACTATCCATGGTCTTGAGATCTTCCA
TAGAATCATAGGCAAGACCTGCTTGCCCAACCTTCGACAGTCTAAAGTATACCCGCTAAG
CAATCAGTGTGCTGCTGCAAATAGGAGCACCGAGTGAACTGCGGCATTCTGCACTTGTTG
CAGAGCGTCCAGGCAGCTCAAACAAAAGTAACCTGTCCCAATATGCTAAAAATCAAACCT
TAAACTACTTGTAGAGAATAGCGAGGTACCAGGCCTGCCTCAGTGACTCCGCAGGAAATT
GAAACGAGCGAGCCCAGCTACTTCCTCAGCAGTCTTCGCCCGAAAAAGCAGCAGATCATA
CATTCTAAGTACAGCTACAAGCATGGAAGAGCTTAAAGGCAGCGGATCCAAAAAATGGGG
GAGCTCAATCACTATGTGCGGACTCTGATGAAAAACGCCGAGGTGAGACAGTTCACCG
■■Homology search results ■■ -
sp_hit_id O88799
Definition sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus
Align length 26
Score (bit) 29.3
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917757|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_A10.
(478 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1 29 9.4

>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
Length = 5376

Score = 29.3 bits (64), Expect = 9.4
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +3

Query: 381 AWKSLKAADP---KNGGAQSLCADSD 449
AWK L+A+DP GG S CADSD
Sbjct: 1837 AWKILEASDPGCFLAGGKPSRCADSD 1862


tr_hit_id A0DBS1
Definition tr|A0DBS1|A0DBS1_PARTE Chromosome undetermined scaffold_44, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length 41
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917757|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_A10.
(478 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0DBS1|A0DBS1_PARTE Chromosome undetermined scaffold_44, whol... 33 9.2

>tr|A0DBS1|A0DBS1_PARTE Chromosome undetermined scaffold_44, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00015385001 PE=4 SV=1
Length = 3010

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2

Query: 80 CLPNLRQSKVYPLSNQCAAANRSTE*TAAFCTCCRASRQLK 202
CLP + P N+C ++ + + TA +CT C A+R L+
Sbjct: 1023 CLPGYYDDGLSPNCNKCQSSCLTCQNTADYCTSCEATRYLE 1063