BP917771 |
Clone id |
YMU001_000105_C03 |
Library |
YMU01 |
Length |
433 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000105_C03. |
Accession |
BP917771 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACGACAGTTGAGTAAAGTCTAAAGCACTACAATGGCATACATCACGGTAGAGCCCAGTTT GTTTGGGCCCAGGACATTGAGACACTCAGGCCAGACTACCCCTTTGGCTCCCATTGTGTG GTGTGTGTGTGTGTCTGTGCTTATGCATGGATATTGGGTTGCGGGTTTGAGTTAATCTAT GTGAGTGGCCTTTGTGGGTGCCCCTCCTCTGGTCCTTGTTTGCTTATGTTTTCCTTGCTG GTTTTGTATATTCTTTCCTATTTTGTTTGTGTTTGTTTGTAGTTAATTGCTTGTGTGCAA GGGAGCTCCTCTTTCCTCTTTGTAGAGTTCCCCTCTCAGCTTCTTTCTTCACTCTTGGCT TCGGTGCCCTCGCCTTCCTGGTGGCGATGTGTTCAATTCTACATCCAATAGCTACCTTCA GCAATTGGACTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RKH1 |
Definition |
sp|Q5RKH1|PRP4B_RAT Serine/threonine-protein kinase PRP4 homolog OS=Rattus norvegicus |
Align length |
54 |
Score (bit) |
33.9 |
E-value |
0.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4NB75 |
Definition |
tr|B4NB75|B4NB75_DROWI GK11842 OS=Drosophila willistoni |
Align length |
68 |
Score (bit) |
37.4 |
E-value |
0.38 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917771|Adiantum capillus-veneris mRNA, clone: YMU001_000105_C03. (433 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4NB75|B4NB75_DROWI GK11842 OS=Drosophila willistoni GN=GK118... 37 0.38 tr|B6Q7E4|B6Q7E4_PENMA Zinc transporter (Msc2), putative OS=Peni... 36 0.84 tr|Q0V9D7|Q0V9D7_XENTR LOC779480 protein (Fragment) OS=Xenopus t... 36 1.1 tr|A8E5Q8|A8E5Q8_XENTR Putative uncharacterized protein (Fragmen... 36 1.1 tr|A2VD02|A2VD02_XENLA LOC100037169 protein OS=Xenopus laevis GN... 36 1.1 tr|B1KPW8|B1KPW8_SHEWM Putative uncharacterized protein OS=Shewa... 36 1.1 tr|A9VCF3|A9VCF3_MONBE Predicted protein OS=Monosiga brevicollis... 35 1.4 tr|A9QDQ7|A9QDQ7_9MUSC Transformer OS=Anastrepha grandis GN=Tra ... 35 1.4 tr|A8XBD6|A8XBD6_CAEBR Putative uncharacterized protein OS=Caeno... 35 1.4 tr|Q4TFF5|Q4TFF5_TETNG Chromosome undetermined SCAF4541, whole g... 35 1.9 tr|Q0FZI5|Q0FZI5_9RHIZ Putative uncharacterized protein OS=Fulvi... 35 2.4 tr|B4MTG3|B4MTG3_DROWI GK20157 OS=Drosophila willistoni GN=GK201... 34 3.2 tr|B3MAW9|B3MAW9_DROAN GF10409 OS=Drosophila ananassae GN=GF1040... 34 3.2 tr|Q5ZLE1|Q5ZLE1_CHICK Putative uncharacterized protein OS=Gallu... 34 4.2 tr|Q8C5G1|Q8C5G1_MOUSE Putative uncharacterized protein (Fragmen... 34 4.2 tr|B2RUN6|B2RUN6_MOUSE PRP4 pre-mRNA processing factor 4 homolog... 34 4.2 tr|Q0SF17|Q0SF17_RHOSR Putative uncharacterized protein OS=Rhodo... 34 4.2 tr|A1V0Z6|A1V0Z6_BURMS Putative uncharacterized protein OS=Burkh... 34 4.2 tr|B4PZH9|B4PZH9_DROYA GE17386 OS=Drosophila yakuba GN=GE17386 P... 34 4.2 tr|A2TN76|A2TN76_9ANNE Paired box 6A transcription factor OS=Hel... 34 4.2 tr|Q4T1Z6|Q4T1Z6_TETNG Chromosome undetermined SCAF10407, whole ... 33 5.4 tr|A3MN21|A3MN21_BURM7 Putative uncharacterized protein OS=Burkh... 33 5.4 tr|A5XUG5|A5XUG5_BURMA Putative uncharacterized protein OS=Burkh... 33 5.4 tr|Q86H89|Q86H89_DICDI Putative uncharacterized protein OS=Dicty... 33 5.4 tr|B0EGG9|B0EGG9_ENTDI Ribonucleoprotein, chloroplast, putative ... 33 5.4 tr|B0SP87|B0SP87_LEPBP NADH-quinone oxidoreductase, chain F OS=L... 33 5.5 tr|B0SFT9|B0SFT9_LEPBA NADH dehydrogenase (Ubiquinone), F chain ... 33 5.5 tr|Q4TEW5|Q4TEW5_TETNG Chromosome undetermined SCAF5055, whole g... 33 7.1 tr|Q4TCA1|Q4TCA1_TETNG Chromosome undetermined SCAF7039, whole g... 33 7.1 tr|Q4RJS9|Q4RJS9_TETNG Chromosome 9 SCAF15033, whole genome shot... 33 7.1
>tr|B4NB75|B4NB75_DROWI GK11842 OS=Drosophila willistoni GN=GK11842 PE=4 SV=1 Length = 1435
Score = 37.4 bits (85), Expect = 0.38 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = -1
Query: 292 KQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGHSHRLTQTRNPISMHKHRHTHTPHN 113 + ++++++K++RK K K +K+ R H+ HR + R+ H H H HN Sbjct: 56 EMISSSEYKEHRKNKKKKREKREKDKEHRHHKHR-REHRRDRDRDRDRDHHHHHHGNSHN 114
Query: 112 GSQRGSLA 89 SQ + A Sbjct: 115 SSQHSTSA 122
>tr|B6Q7E4|B6Q7E4_PENMA Zinc transporter (Msc2), putative OS=Penicillium marneffei ATCC 18224 GN=PMAA_016070 PE=4 SV=1 Length = 898
Score = 36.2 bits (82), Expect = 0.84 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%) Frame = -1
Query: 334 RGTLQRGKRSSLAHKQLTTNKHKQNRKEYTKPARKT*ANKDQRR-GTHKGHSHRLTQTRN 158 RG ++ G S L +T K+ E+ +P T D HSH T + Sbjct: 22 RGHMRSGNWSQLPASTMTPTAEKEEH-EFPEPVEHTTNVHDHHHHDAEHSHSHGHNHTHS 80
Query: 157 P--ISMHKHRHTHTPHNGSQRG 98 P IS H H H+H+ ++G G Sbjct: 81 PSLISNHSHSHSHSHNHGHGHG 102
>tr|Q0V9D7|Q0V9D7_XENTR LOC779480 protein (Fragment) OS=Xenopus tropicalis GN=LOC779480 PE=2 SV=1 Length = 183
Score = 35.8 bits (81), Expect = 1.1 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -1
Query: 292 KQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGHSHRLTQTRNPISMHKHRHTHTPHN 113 +Q NKH +++K+ K + R HK H H + ++ HKH+H H H Sbjct: 22 EQQPLNKHSKHKKK-----------KHKHRSKHKKHKHSSEEEKD--KKHKHKHKHKKHK 68
Query: 112 GSQRGSL 92 G++ Sbjct: 69 RKDSGNI 75
>tr|A8E5Q8|A8E5Q8_XENTR Putative uncharacterized protein (Fragment) OS=Xenopus tropicalis PE=2 SV=1 Length = 197
Score = 35.8 bits (81), Expect = 1.1 Identities = 18/67 (26%), Positives = 30/67 (44%) Frame = -1
Query: 292 KQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGHSHRLTQTRNPISMHKHRHTHTPHN 113 +Q NKH +++K+ K + R HK H H + ++ HKH+H H H Sbjct: 34 EQQPLNKHSKHKKK-----------KHKHRSKHKKHKHSSEEEKD--KKHKHKHKHKKHK 80
Query: 112 GSQRGSL 92 G++ Sbjct: 81 RKDSGNI 87
>tr|A2VD02|A2VD02_XENLA LOC100037169 protein OS=Xenopus laevis GN=LOC100037169 PE=2 SV=1 Length = 959
Score = 35.8 bits (81), Expect = 1.1 Identities = 17/74 (22%), Positives = 33/74 (44%) Frame = -1
Query: 313 KRSSLAHKQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGHSHRLTQTRNPISMHKHR 134 + ++ ++ NKH +++K+ K + R HK H H + ++ HKH+ Sbjct: 26 ENGEVSEEEQPQNKHSKHKKK-----------KHKHRSKHKKHKHSSEEEKD--KKHKHK 72
Query: 133 HTHTPHNGSQRGSL 92 H H H G++ Sbjct: 73 HKHKKHKRKDSGNI 86
>tr|B1KPW8|B1KPW8_SHEWM Putative uncharacterized protein OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=Swoo_3382 PE=3 SV=1 Length = 488
Score = 35.8 bits (81), Expect = 1.1 Identities = 17/62 (27%), Positives = 35/62 (56%) Frame = -1
Query: 325 LQRGKRSSLAHKQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGHSHRLTQTRNPISM 146 L+ +R+SLAH + ++H + K Y K ++ +++QR + +SH+ ++ PI Sbjct: 304 LRHAERNSLAHNRKHKSRHDKTLKHYNKQVKQ---HREQRFTSKLHNSHKPVKSHRPIKS 360
Query: 145 HK 140 H+ Sbjct: 361 HQ 362
>tr|A9VCF3|A9VCF3_MONBE Predicted protein OS=Monosiga brevicollis GN=29888 PE=4 SV=1 Length = 995
Score = 35.4 bits (80), Expect = 1.4 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Frame = -1
Query: 334 RGTLQRGKRSSLAHKQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGH-SHRLTQTRN 158 R T + +R + +Q T +H + R+E + R+ ++ RR TH+ +HR T T Sbjct: 26 RHTERHRERHTQRERQRHTERHTERRRENRRENRRE-NRRENRRETHRERDTHRDTHTHT 84
Query: 157 PISMHKHRHTHTPHNGSQR 101 +H H T H +QR Sbjct: 85 QRERERHTHRDT-HRDTQR 102
>tr|A9QDQ7|A9QDQ7_9MUSC Transformer OS=Anastrepha grandis GN=Tra PE=2 SV=1 Length = 416
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/83 (22%), Positives = 36/83 (43%) Frame = -1
Query: 337 ERGTLQRGKRSSLAHKQLTTNKHKQNRKEYTKPARKT*ANKDQRRGTHKGHSHRLTQTRN 158 ERG+ S H+ +K+ + ++ + P+R ++D+ +HK H Sbjct: 240 ERGSRSEKTSSRYRHRSEDRSKNDRRQRHWRSPSRSPSRSRDRLTRSHKQSRHD------ 293
Query: 157 PISMHKHRHTHTPHNGSQRGSLA 89 +H++ H+ H GS LA Sbjct: 294 ----ERHKNCHSEHKGSSNDELA 312
>tr|A8XBD6|A8XBD6_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG10550 PE=4 SV=1 Length = 147
Score = 35.4 bits (80), Expect = 1.4 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Frame = -1
Query: 307 SSLAHKQLTTNKHKQNRKEYTKP----ARKT*ANKDQRRGTHKGHSHRLTQTRNPISMHK 140 S AHK + HK R + KP A K + + + + + H+H TQT H Sbjct: 84 SPQAHKPTSPQGHKPTRPQAYKPTSLQAHKPTSPQGYKPTSPQAHTHTRTQT------HT 137
Query: 139 HRHTHTP 119 H HTH+P Sbjct: 138 HTHTHSP 144
>tr|Q4TFF5|Q4TFF5_TETNG Chromosome undetermined SCAF4541, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00001663001 PE=4 SV=1 Length = 380
Score = 35.0 bits (79), Expect = 1.9 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = -1
Query: 187 HSHRLTQTRNPISMHKHRHTHTPHNGSQRGSLA*VSQCPGPKQTGLYRDVCHC 29 H+H T T H H HTHT H +Q SL C G++R VC C Sbjct: 56 HTHTHTHTHTHTHTHTHTHTHT-HTHTQSHSLTAFLNC-----FGVHRPVCVC 102
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