BP917775 [AcEST]

BP917775
Clone id	YMU001_000105_C08
Library	YMU01
Length	544
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000105_C08.
Accession	BP917775
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TTGTTCGTAGAAAAAAGCAAAAGAAACATGAGATCAGAATAAGCCTCTTCTAATCACAAG GCCAATGTTGTGTAAACTGATCTCAACCAGCAGGCTCTTAGCCTTCATCAGGATGTTCCA ACTGACAGAAATAGATCTGATGCCTCTACTATAATACACAGCCTTCTTTTGATACTTCAT GCTCCTTGAGTCCAAAACCCCAATACAGACAAATCTCTCTCTCAACAAATCTCACTCTGT GACAACCGAGGGCTGTATTGTGTGTTCCCTCATCTTTGTCTATGCCACAGTGATAAATAT TATCCAGTCACCAATCAACAGCAACATTGATGTTGCTCCGAACATTCAGCAACTTGATCT GAAGTAATTAAAAGAGCATGGCACAACTTCAAATTGCACACGCATCAATCCCACCAACAA GAAGAGGATTAAACTTTCCCCCCTTGAAAAACATTTGAAGGCAATATTACATTGCATCCA ATCCTATTGACTTCTTCGGCAGCAAACAATAGACCGAGGTGACCTTCCTTCTCAAGGAGA TTCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9NY99
Definition	sp\|Q9NY99\|SNTG2_HUMAN Gamma-2-syntrophin OS=Homo sapiens
Align length	60
Score (bit)	31.2
E-value	3.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917775\|Adiantum capillus-veneris mRNA, clone: YMU001_000105_C08. (544 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9NY99\|SNTG2_HUMAN Gamma-2-syntrophin OS=Homo sapiens GN=SNTG... 31 3.4 >sp\|Q9NY99\|SNTG2_HUMAN Gamma-2-syntrophin OS=Homo sapiens GN=SNTG2 PE=1 SV=1 Length = 539 Score = 31.2 bits (69), Expect = 3.4 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = +2 Query: 359 LKLKEHGTTSNCTRINPTNKKRIKLSPLE-KHLKAILHCIQSYLLRQQTIDRGDLPSQ 535 LK + G T + K+I++ LE + L+A+LHCI S+ + ++D G + SQ Sbjct: 470 LKGSSDDGKTRVKLLFQNLDTKQIEMKELEFQDLRAVLHCIHSFIAAKVASVDPGFMDSQ 529
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP917775\|Adiantum capillus-veneris mRNA, clone: YMU001_000105_C08. (544 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****