BP917778
Clone id YMU001_000105_C12
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAATAATCGAATTTCTTTATCTAACAAACTTGAACCTTTTTGCAAGAGCACTTTTGGACA
TCAATTTTCCTTTGAATTACATTGCTGCGCTCTCTTGTTGCAAGGCAGGTACCCTTGCAA
AGCAGTGTAATAAATGAGACAGGAACATCAGGACATTAATTTGACAAGTAGATGTGTATA
ATAATTGAGACGGGAACATCACGACATGAATTTTACAAGTAGATGTAAATCTGAGTCTTA
TGTGATCCTGTACAATCAGAACAAAGAGGGTTTGTTCAAGTGGAAGAATTCATTCTCTTC
GTGTATGGAGCCTTCGCAGGTTCCTGATATGGTGTAAAGGATCCCCATTAGATTATCGAT
GAAGATGCTGGTTTTATCAGAGGTATCTTGGGATGATTAGTGAGAGAACCACTAAGCTTG
CAACTTCCTTGAAAAAACTACGTACATTGGGTCTGTCCTGCCGGGATTTGGGGAAATGTC
AAGAGCCTGAGGAGGCTCATATCCACCAGCATAATGAAAATAAGAACCGACAATGTACAC
ATGATCAACATCTCCAGTTCCTG
■■Homology search results ■■ -
sp_hit_id Q01499
Definition sp|Q01499|POLG_BVDVS Genome polyprotein OS=Bovine viral diarrhea virus (strain SD-1)
Align length 39
Score (bit) 31.6
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917778|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_C12.
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01499|POLG_BVDVS Genome polyprotein OS=Bovine viral diarrhea... 32 2.8

>sp|Q01499|POLG_BVDVS Genome polyprotein OS=Bovine viral diarrhea
virus (strain SD-1) PE=3 SV=1
Length = 3898

Score = 31.6 bits (70), Expect = 2.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3

Query: 324 LIWCKGSPLDYR*RCWFYQRYLGMISERTTKLATSLKKL 440
+ WCKG Y RC RYL ++ R + KKL
Sbjct: 737 IAWCKGGKFTYLSRCTRETRYLAILHSRALPTSVVFKKL 775


tr_hit_id A9TTL4
Definition tr|A9TTL4|A9TTL4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 48
Score (bit) 96.7
E-value 8.0e-19
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917778|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_C12.
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TTL4|A9TTL4_PHYPA Predicted protein OS=Physcomitrella paten... 97 8e-19
tr|A7PE95|A7PE95_VITVI Chromosome chr11 scaffold_13, whole genom... 91 6e-17
tr|Q9SU88|Q9SU88_ARATH Putative uncharacterized protein T16L4.10... 88 4e-16
tr|Q94JR4|Q94JR4_ARATH AT4g29590/T16L4_100 OS=Arabidopsis thalia... 88 4e-16
tr|Q8LFX0|Q8LFX0_ARATH Putative uncharacterized protein OS=Arabi... 88 4e-16
tr|A4S7R5|A4S7R5_OSTLU Predicted protein OS=Ostreococcus lucimar... 83 1e-14
tr|Q8S0I2|Q8S0I2_ORYSJ Methyltransferase-like (Os01g0712600 prot... 82 2e-14
tr|Q00UZ3|Q00UZ3_OSTTA Methyltransferase-like [Oryza sativa (ISS... 82 2e-14
tr|A2ZX58|A2ZX58_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|B8A8N1|B8A8N1_ORYSI Putative uncharacterized protein OS=Oryza... 77 5e-13
tr|B5Y3G7|B5Y3G7_PHATR Predicted protein OS=Phaeodactylum tricor... 65 3e-09
tr|B8C942|B8C942_THAPS Predicted protein OS=Thalassiosira pseudo... 62 2e-08
tr|A8J8W9|A8J8W9_CHLRE Ubiquinone/menaquinone biosynthesis methy... 61 4e-08
tr|Q7XZ14|Q7XZ14_GRIJA Methyltrasferase (Fragment) OS=Griffithsi... 47 5e-04
tr|B7G4C3|B7G4C3_PHATR Predicted protein (Fragment) OS=Phaeodact... 43 0.014
tr|B8GB91|B8GB91_9CHLR Methyltransferase type 11 OS=Chloroflexus... 42 0.030
tr|B5Y442|B5Y442_PHATR Predicted protein (Fragment) OS=Phaeodact... 42 0.030
tr|A9WE18|A9WE18_CHLAA Methyltransferase type 11 OS=Chloroflexus... 40 0.11
tr|B2QGI0|B2QGI0_9CHLR Methyltransferase type 11 OS=Chloroflexus... 40 0.11
tr|Q3K4Y3|Q3K4Y3_PSEPF Aminopeptidase P. Metallo peptidase. MERO... 37 0.74
tr|A9WDM9|A9WDM9_CHLAA tRNA/rRNA methyltransferase (SpoU) OS=Chl... 37 0.97
tr|B2QQU5|B2QQU5_9CHLR tRNA/rRNA methyltransferase (SpoU) OS=Chl... 37 0.97
tr|Q88CI1|Q88CI1_PSEPK Aminopeptidase P II OS=Pseudomonas putida... 36 1.7
tr|Q4K407|Q4K407_PSEF5 Xaa-Pro aminopeptidase OS=Pseudomonas flu... 36 1.7
tr|Q1I351|Q1I351_PSEE4 Aminopeptidase P OS=Pseudomonas entomophi... 36 1.7
tr|B1JEZ0|B1JEZ0_PSEPW Peptidase M24 OS=Pseudomonas putida (stra... 36 1.7
tr|B0KP85|B0KP85_PSEPG Peptidase M24 OS=Pseudomonas putida (stra... 36 1.7
tr|A5WAR5|A5WAR5_PSEP1 Peptidase M24 OS=Pseudomonas putida (stra... 36 1.7
tr|A4VRU2|A4VRU2_PSEU5 Aminopeptidase P OS=Pseudomonas stutzeri ... 36 1.7
tr|Q4J0J8|Q4J0J8_AZOVI Peptidase M24:Peptidase M24B, X-Pro dipep... 36 1.7

>tr|A9TTL4|A9TTL4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_150389 PE=4 SV=1
Length = 239

Score = 96.7 bits (239), Expect = 8e-19
Identities = 42/48 (87%), Positives = 47/48 (97%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRKLQA 415
TGDVDHV IVGSYFHYAGG+EPPQALDISPNPGR+DPMY+V+SRKL+A
Sbjct: 192 TGDVDHVMIVGSYFHYAGGFEPPQALDISPNPGRSDPMYIVYSRKLKA 239


>tr|A7PE95|A7PE95_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016580001
PE=4 SV=1
Length = 315

Score = 90.5 bits (223), Expect = 6e-17
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRKL 421
TGD DH IVGSYFHYAGG+EPPQA+DISPNPGR+DPMY+V+SRKL
Sbjct: 267 TGDADHALIVGSYFHYAGGFEPPQAVDISPNPGRSDPMYIVYSRKL 312


>tr|Q9SU88|Q9SU88_ARATH Putative uncharacterized protein T16L4.100
(Putative uncharacterized protein AT4g29590)
OS=Arabidopsis thaliana GN=T16L4.100 PE=2 SV=1
Length = 317

Score = 87.8 bits (216), Expect = 4e-16
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRKL 421
TGD DH IVGSYFHYAGG+E PQA+DISPNPGR+DPMYVV+SRKL
Sbjct: 269 TGDADHALIVGSYFHYAGGFEAPQAVDISPNPGRSDPMYVVYSRKL 314


>tr|Q94JR4|Q94JR4_ARATH AT4g29590/T16L4_100 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 250

Score = 87.8 bits (216), Expect = 4e-16
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRKL 421
TGD DH IVGSYFHYAGG+E PQA+DISPNPGR+DPMYVV+SRKL
Sbjct: 202 TGDADHALIVGSYFHYAGGFEAPQAVDISPNPGRSDPMYVVYSRKL 247


>tr|Q8LFX0|Q8LFX0_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 317

Score = 87.8 bits (216), Expect = 4e-16
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRKL 421
TGD DH IVGSYFHYAGG+E PQA+DISPNPGR+DPMYVV+SRKL
Sbjct: 269 TGDADHALIVGSYFHYAGGFEAPQAVDISPNPGRSDPMYVVYSRKL 314


>tr|A4S7R5|A4S7R5_OSTLU Predicted protein OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_27591 PE=4 SV=1
Length = 241

Score = 82.8 bits (203), Expect = 1e-14
Identities = 34/48 (70%), Positives = 44/48 (91%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRKLQA 415
TGD+DHV+IVG+Y+H+AGG+EPP A DISPNPG+TDPMYVV ++K+ A
Sbjct: 194 TGDLDHVWIVGAYYHFAGGFEPPAAEDISPNPGKTDPMYVVTAKKMTA 241


>tr|Q8S0I2|Q8S0I2_ORYSJ Methyltransferase-like (Os01g0712600
protein) OS=Oryza sativa subsp. japonica GN=B1142C05.19
PE=4 SV=1
Length = 307

Score = 82.4 bits (202), Expect = 2e-14
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRK 424
T D DH +IVG+YFHYAG +EPP+A+DISPNPGRTDPMYVV SRK
Sbjct: 260 TSDADHAWIVGAYFHYAGDFEPPEAVDISPNPGRTDPMYVVQSRK 304


>tr|Q00UZ3|Q00UZ3_OSTTA Methyltransferase-like [Oryza sativa (ISS)
OS=Ostreococcus tauri GN=Ot15g02150 PE=4 SV=1
Length = 340

Score = 82.4 bits (202), Expect = 2e-14
Identities = 34/45 (75%), Positives = 42/45 (93%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRK 424
TGD+DHV+IVG+Y+H+AGG+EPPQ DISPNPGRTDPM+VV +RK
Sbjct: 294 TGDLDHVWIVGAYYHFAGGFEPPQGEDISPNPGRTDPMFVVTARK 338


>tr|A2ZX58|A2ZX58_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003130 PE=4 SV=1
Length = 307

Score = 82.4 bits (202), Expect = 2e-14
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPGRTDPMYVVFSRK 424
T D DH +IVG+YFHYAG +EPP+A+DISPNPGRTDPMYVV SRK
Sbjct: 260 TSDADHAWIVGAYFHYAGDFEPPEAVDISPNPGRTDPMYVVQSRK 304


>tr|B8A8N1|B8A8N1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03487 PE=4 SV=1
Length = 248

Score = 77.4 bits (189), Expect = 5e-13
Identities = 35/46 (76%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = -3

Query: 558 TGDVDHVYIVGSYFHYAGGYEPPQALDISPNPG-RTDPMYVVFSRK 424
TGD DH +IVG+YFHYAG +E P+A+DISPNPG RTDPMYVV SRK
Sbjct: 200 TGDADHAWIVGAYFHYAGDFESPEAIDISPNPGRRTDPMYVVQSRK 245