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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917789
Clone id YMU001_000105_E01
Library
Length 379
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAG
AGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCC
CCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGT
ATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTG
CGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAA
TCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGG
TGATGTGGAAGCTGCCCAT
■■Homology search results ■■ -
sp_hit_id P05348
Definition sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays
Align length 103
Score (bit) 127.0
E-value 2.0e-29
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917789|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E01.
         (379 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   127   2e-29
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   126   4e-29
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   126   4e-29
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   125   5e-29
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   125   5e-29
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   125   6e-29
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   125   6e-29
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   124   1e-28
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...   124   1e-28
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...   124   1e-28
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   124   2e-28
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   123   3e-28
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   122   5e-28
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   121   9e-28
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   121   9e-28
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   121   9e-28
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha...   121   1e-27
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   121   1e-27
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   121   1e-27
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   120   2e-27
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   120   2e-27
sp|Q04450|RBS2_MESCR Ribulose bisphosphate carboxylase small cha...   120   2e-27
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   120   3e-27
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   120   3e-27
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   119   4e-27
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   119   5e-27
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...   119   5e-27
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha...   119   6e-27
sp|P04714|RBS1_PETHY Ribulose bisphosphate carboxylase small cha...   118   8e-27

>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  127 bits (318), Expect = 2e-29
 Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
 Frame = +3

Query: 78  FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 249 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLP
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLP 119


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  126 bits (316), Expect = 4e-29
 Identities = 59/110 (53%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
 Frame = +3

Query: 63  SLSKSFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
           S+  SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS 
Sbjct: 21  SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
           EQ+ K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLP
Sbjct: 81  EQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLP 130


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  126 bits (316), Expect = 4e-29
 Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
 Frame = +3

Query: 63  SLSKSFSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
           S+   F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS 
Sbjct: 21  SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLP
Sbjct: 81  EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLP 129


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  125 bits (315), Expect = 5e-29
 Identities = 58/101 (57%), Positives = 69/101 (68%)
 Frame = +3

Query: 75  SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 254
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 255 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLP
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLP 128


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
          Length = 168

 Score =  125 bits (315), Expect = 5e-29
 Identities = 60/103 (58%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
 Frame = +3

Query: 78  FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
           F GLK+T     A +S   LA +SNG R+  M VW  Y NKKFETLSYLPPL+ EQ+ KQ
Sbjct: 16  FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 249 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           VD+++R  W PC+EF K G VYRE+     YYDGRYW MWKLP
Sbjct: 76  VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLP 118


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  125 bits (314), Expect = 6e-29
 Identities = 57/99 (57%), Positives = 69/99 (69%)
 Frame = +3

Query: 81  SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 260
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 261 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           ++ GW PCIEFD  G+V RE     GYYDGRYW MWKLP
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLP 130


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  125 bits (314), Expect = 6e-29
 Identities = 61/104 (58%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
 Frame = +3

Query: 78  FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 245
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 246 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLP
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLP 129


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  124 bits (312), Expect = 1e-28
 Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 4/104 (3%)
 Frame = +3

Query: 78  FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 249 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLP
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLP 133


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  124 bits (311), Expect = 1e-28
 Identities = 59/110 (53%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
 Frame = +3

Query: 63  SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
           SL+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS 
Sbjct: 21  SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLP
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLP 130


>sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain
           3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1
          Length = 180

 Score =  124 bits (311), Expect = 1e-28
 Identities = 59/104 (56%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
 Frame = +3

Query: 78  FSGLKATTLFAPKSPNP---LAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
           F GLK+ T F  K  N       SNG RV  M VW P   KKFETLSYLPPL+ +Q+ K+
Sbjct: 27  FGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKE 86

Query: 249 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
           V++++RKGW PC+EF+ + G VYREH    GYYDGRYW MWKLP
Sbjct: 87  VEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLP 130
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 106
Score (bit) 209.0
E-value 4.0e-53
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917789|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E01.
         (379 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   209   4e-53
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   133   4e-30
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   127   4e-28
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   126   5e-28
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   126   6e-28
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic...   126   6e-28
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   125   8e-28
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   125   8e-28
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   125   1e-27
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c...   125   1e-27
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   125   1e-27
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   124   2e-27
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   124   2e-27
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   124   3e-27
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   124   3e-27
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   124   3e-27
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   124   3e-27
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   123   4e-27
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   122   7e-27
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   122   7e-27
tr|B6RHQ4|B6RHQ4_9POAL Chloroplast ribulose-1,5-bisphosphate car...   122   7e-27
tr|Q9ZP07|Q9ZP07_CICAR Ribulose bisphosphate carboxylase small c...   122   9e-27
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   122   9e-27
tr|Q43115|Q43115_9ROSA Ribulose bisphosphate carboxylase small c...   122   1e-26

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  209 bits (533), Expect = 4e-53
 Identities = 95/106 (89%), Positives = 102/106 (96%)
 Frame = +3

Query: 60  ESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQI 239
           ESLSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QI
Sbjct: 20  ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 240 AKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           AKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLP
Sbjct: 80  AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLP 125


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  139 bits (350), Expect = 7e-32
 Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLP
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLP 131


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  136 bits (342), Expect = 6e-31
 Identities = 65/105 (61%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLP
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLP 131


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  135 bits (341), Expect = 8e-31
 Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLP
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLP 166


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  135 bits (341), Expect = 8e-31
 Identities = 63/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLP
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLP 136


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  135 bits (341), Expect = 8e-31
 Identities = 63/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 36  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLP
Sbjct: 96  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLP 140


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  135 bits (341), Expect = 8e-31
 Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLP
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLP 136


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  133 bits (335), Expect = 4e-30
 Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
 Frame = +3

Query: 72  KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLP
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLP 135


>tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 170

 Score =  127 bits (318), Expect = 4e-28
 Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
 Frame = +3

Query: 78  FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 249 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLP
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLP 119


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  126 bits (317), Expect = 5e-28
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +3

Query: 135 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 314
           +SNGS+   M  W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV 
Sbjct: 41  VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 315 REHFHGSGYYDGRYWVMWKLP 377
           REH    GYYDGRYW +WKLP
Sbjct: 101 REHSRMPGYYDGRYWTLWKLP 121