BP917789
Clone id YMU001_000105_E01
Library
Length 379
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTATGGCCATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAG
AGAGCTTGTCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCC
CCAACCCGCTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGT
ATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTG
CGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAA
TCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGG
TGATGTGGAAGCTGCCCAT
■■Homology search results ■■ -
sp_hit_id P05348
Definition sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays
Align length 103
Score (bit) 127.0
E-value 2.0e-29
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917789|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E01.
(379 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 127 2e-29
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 126 4e-29
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 126 4e-29
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 125 5e-29
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai... 125 5e-29
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 125 6e-29
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 125 6e-29
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 124 1e-28
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 124 1e-28
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain... 124 1e-28
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain... 124 1e-28
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 124 2e-28
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai... 123 3e-28
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 122 5e-28
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 121 9e-28
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 121 9e-28
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 121 9e-28
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha... 121 1e-27
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 121 1e-27
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 121 1e-27
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 120 2e-27
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha... 120 2e-27
sp|Q04450|RBS2_MESCR Ribulose bisphosphate carboxylase small cha... 120 2e-27
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 120 3e-27
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 120 3e-27
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 119 4e-27
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 119 5e-27
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai... 119 5e-27
sp|Q08183|RBS3_MESCR Ribulose bisphosphate carboxylase small cha... 119 6e-27
sp|P04714|RBS1_PETHY Ribulose bisphosphate carboxylase small cha... 118 8e-27

>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
Length = 170

Score = 127 bits (318), Expect = 2e-29
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +3

Query: 78 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F GLK+T A +S L +SNG R+ M VW Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17 FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 249 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
VD+++R GW PC+EF K+G VYRE+ YYDGRYW MWKLP
Sbjct: 77 VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLP 119


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187

Score = 126 bits (316), Expect = 4e-29
Identities = 59/110 (53%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Frame = +3

Query: 63 SLSKSFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S+ SF+GLK+ F L I SNG RV MLVW P + KK+ETLSYLP LS
Sbjct: 21 SMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
EQ+ K+++++++KGW PC+EF+ + G VYREH GYYDGRYW MWKLP
Sbjct: 81 EQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLP 130


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177

Score = 126 bits (316), Expect = 4e-29
Identities = 62/109 (56%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
Frame = +3

Query: 63 SLSKSFSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
S+ F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS
Sbjct: 21 SMVAPFNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSV 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
E +AK+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLP
Sbjct: 81 EDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLP 129


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178

Score = 125 bits (315), Expect = 5e-29
Identities = 58/101 (57%), Positives = 69/101 (68%)
Frame = +3

Query: 75 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 254
S + T FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 255 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
+++R GW PCIEF K+G VYRE+ + GYYDGRYW MWKLP
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLP 128


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
Length = 168

Score = 125 bits (315), Expect = 5e-29
Identities = 60/103 (58%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Frame = +3

Query: 78 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F GLK+T A +S LA +SNG R+ M VW Y NKKFETLSYLPPL+ EQ+ KQ
Sbjct: 16 FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 249 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
VD+++R W PC+EF K G VYRE+ YYDGRYW MWKLP
Sbjct: 76 VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLP 118


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
Length = 180

Score = 125 bits (314), Expect = 6e-29
Identities = 57/99 (57%), Positives = 69/99 (69%)
Frame = +3

Query: 81 SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 260
+GLKA +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32 AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 261 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
++ GW PCIEFD G+V RE GYYDGRYW MWKLP
Sbjct: 92 IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLP 130


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177

Score = 125 bits (314), Expect = 6e-29
Identities = 61/104 (58%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Frame = +3

Query: 78 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 245
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 246 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLP
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLP 129


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183

Score = 124 bits (312), Expect = 1e-28
Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 4/104 (3%)
Frame = +3

Query: 78 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F+GLK+++ F KS + +I SNG RV M VW P KKFETLSYLPPLSSE +AK+
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 249 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLP
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLP 133


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181

Score = 124 bits (311), Expect = 1e-28
Identities = 59/110 (53%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Frame = +3

Query: 63 SLSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 230
SL+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS
Sbjct: 21 SLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 231 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLP
Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLP 130


>sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain
3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1
Length = 180

Score = 124 bits (311), Expect = 1e-28
Identities = 59/104 (56%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Frame = +3

Query: 78 FSGLKATTLFAPKSPNP---LAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F GLK+ T F K N SNG RV M VW P KKFETLSYLPPL+ +Q+ K+
Sbjct: 27 FGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKE 86

Query: 249 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLP 377
V++++RKGW PC+EF+ + G VYREH GYYDGRYW MWKLP
Sbjct: 87 VEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLP 130


tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 106
Score (bit) 209.0
E-value 4.0e-53
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917789|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E01.
(379 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 209 4e-53
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 139 7e-32
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 136 6e-31
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 135 8e-31
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 135 8e-31
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c... 135 8e-31
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 135 8e-31
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 133 4e-30
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m... 127 4e-28
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 126 5e-28
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 126 6e-28
tr|B7FHB2|B7FHB2_MEDTR Putative uncharacterized protein OS=Medic... 126 6e-28
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 125 8e-28
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 125 8e-28
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 125 1e-27
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c... 125 1e-27
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 125 1e-27
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 124 2e-27
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 124 2e-27
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car... 124 3e-27
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 124 3e-27
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 124 3e-27
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 124 3e-27
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 123 4e-27
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c... 122 7e-27
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 122 7e-27
tr|B6RHQ4|B6RHQ4_9POAL Chloroplast ribulose-1,5-bisphosphate car... 122 7e-27
tr|Q9ZP07|Q9ZP07_CICAR Ribulose bisphosphate carboxylase small c... 122 9e-27
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 122 9e-27
tr|Q43115|Q43115_9ROSA Ribulose bisphosphate carboxylase small c... 122 1e-26

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174

Score = 209 bits (533), Expect = 4e-53
Identities = 95/106 (89%), Positives = 102/106 (96%)
Frame = +3

Query: 60 ESLSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQI 239
ESLSKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QI
Sbjct: 20 ESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQI 79

Query: 240 AKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
AKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLP
Sbjct: 80 AKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLP 125


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179

Score = 139 bits (350), Expect = 7e-32
Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLP
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLP 131


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179

Score = 136 bits (342), Expect = 6e-31
Identities = 65/105 (61%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLP
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLP 131


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214

Score = 135 bits (341), Expect = 8e-31
Identities = 63/105 (60%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLP
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLP 166


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184

Score = 135 bits (341), Expect = 8e-31
Identities = 63/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLP
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLP 136


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_8310 PE=3 SV=1
Length = 156

Score = 135 bits (341), Expect = 8e-31
Identities = 63/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 36 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLP
Sbjct: 96 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLP 140


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184

Score = 135 bits (341), Expect = 8e-31
Identities = 64/105 (60%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLP
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLP 136


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183

Score = 133 bits (335), Expect = 4e-30
Identities = 61/105 (58%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Frame = +3

Query: 72 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 251
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 252 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLP 377
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLP
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLP 135


>tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 170

Score = 127 bits (318), Expect = 4e-28
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +3

Query: 78 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 248
F GLK+T A +S L +SNG R+ M VW Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17 FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 249 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLP 377
VD+++R GW PC+EF K+G VYRE+ YYDGRYW MWKLP
Sbjct: 77 VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLP 119


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
chain OS=Populus trichocarpa PE=2 SV=1
Length = 170

Score = 126 bits (317), Expect = 5e-28
Identities = 51/81 (62%), Positives = 64/81 (79%)
Frame = +3

Query: 135 ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVY 314
+SNGS+ M W P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV
Sbjct: 41 VSNGSKTFCMKTWNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVR 100

Query: 315 REHFHGSGYYDGRYWVMWKLP 377
REH GYYDGRYW +WKLP
Sbjct: 101 REHSRMPGYYDGRYWTLWKLP 121