BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917797|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E11.
         (209 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P26537|VL1_HPV5B Major capsid protein L1 OS=Human papillomavi...    31   2.2  
sp|P06917|VL1_HPV05 Major capsid protein L1 OS=Human papillomavi...    31   2.2  

>sp|P26537|VL1_HPV5B Major capsid protein L1 OS=Human papillomavirus
           type 5b GN=L1 PE=3 SV=1
          Length = 525

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 176 LGLSKHGSMYFTKIKDIKNGEVYIMYKK 93
           LG+   G  YF K+KD +N   YI + K
Sbjct: 114 LGVGSTGHPYFNKVKDTENSNAYITFSK 141


>sp|P06917|VL1_HPV05 Major capsid protein L1 OS=Human papillomavirus
           type 5 GN=L1 PE=3 SV=2
          Length = 516

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 176 LGLSKHGSMYFTKIKDIKNGEVYIMYKKVEEE 81
           LG+   G  YF K+KD +N   YI + K + +
Sbjct: 114 LGVRSTGHPYFNKVKDTENSNAYITFSKDDRQ 145

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917797|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_E11.
         (209 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T8Q7|A9T8Q7_PHYPA Predicted protein OS=Physcomitrella paten...    30   3.2  
tr|A5C3T0|A5C3T0_VITVI Putative uncharacterized protein OS=Vitis...    33   9.1  

>tr|A9T8Q7|A9T8Q7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_89559 PE=4 SV=1
          Length = 697

 Score = 30.4 bits (67), Expect(2) = 3.2
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = -1

Query: 209 TKGQDALSKGFLGLSKHGSMYFTKIKDIKNGEVYIMY 99
           ++G+DA    F+G+ ++G++ + K+ D K  E   +Y
Sbjct: 356 SRGEDAFDASFIGILENGNIMYKKVDDFKRKERKRLY 392



 Score = 22.7 bits (47), Expect(2) = 3.2
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 79  GFLKDNECILGIFKQVSFVDTMD 11
           G L+D+E ILG++++    D+++
Sbjct: 402 GTLQDDEKILGVYEENGLEDSLE 424


>tr|A5C3T0|A5C3T0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022685 PE=4 SV=1
          Length = 774

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +1

Query: 22  LRKKPV*RYLKYTHYLLE----NHSSSTFLYIMYTSPFLMSLIFVKYID 156
           L++ P   YL+   +L+E    N  ++T L+I+Y+S  ++ L+F  YID
Sbjct: 536 LKQAPRAWYLELRQFLIESRFTNSHANTSLFILYSSDIIIYLLFYHYID 584