BP917799
Clone id YMU001_000105_F02
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGATGAAAGCCCCTACTACAAGGAGCTGTCTGGTTACATGGAGATGATCAAGGACATGAA
GGTCAATGCACCTGCGGATGCCTTCAAGGAGGAGTTCATGAAGATCTGCAGAGGGTGCGT
TGGTTTAGTATAAGGGTCTGATTATCTGGACTCAATAATGCATCACGGAATAAACCTGCC
TTTTGATTGGAATATATGCATTTTGGCAACTGCTTTCCAGGTTCCTGGTTGATGAAGCTT
AGTGTATATATATTCCCGGAGGCTGGGATGGGTTCTCTTCAGGCATAAAAGAGTAGGTTT
GCAGCAGTACTTTTTAGCTTATGTAGGCTTTACCTTAGTTAGGTCACTCAGGTGCTCATG
ATTGGAAGGTTCTGTGTATATTATGGGTTGCTGTGGGTATGGATGTGTATTGGTATCTTG
GAGTTTCTGCAAACAAGAACTCT
■■Homology search results ■■ -
sp_hit_id O43125
Definition sp|O43125|CSH3_SCHPO Protein csh3 OS=Schizosaccharomyces pombe
Align length 22
Score (bit) 29.6
E-value 5.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917799|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_F02.
(443 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O43125|CSH3_SCHPO Protein csh3 OS=Schizosaccharomyces pombe G... 30 5.9
sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN... 29 7.7

>sp|O43125|CSH3_SCHPO Protein csh3 OS=Schizosaccharomyces pombe
GN=csh3 PE=2 SV=1
Length = 296

Score = 29.6 bits (65), Expect = 5.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3

Query: 396 PQQPIIYTEPSNHEHLSDLTKV 331
PQQPI+ +P+ H+H S K+
Sbjct: 250 PQQPIVVAQPTEHKHSSTFKKI 271


>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus
GN=Znf536 PE=2 SV=1
Length = 1302

Score = 29.3 bits (64), Expect = 7.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3

Query: 438 SCLQKLQDTNTHPYPQQPIIYTEPSNHEHLSDLTKV 331
SCL K + THP PI+ E +N DL+ +
Sbjct: 1130 SCLNKNTEGKTHPDDDAPILIPETTNKNTTDDLSDI 1165


tr_hit_id Q109M9
Definition tr|Q109M9|Q109M9_ORYSJ ENT domain containing protein, expressed OS=Oryza sativa subsp. japonica
Align length 54
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917799|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_F02.
(443 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q109M9|Q109M9_ORYSJ ENT domain containing protein, expressed ... 33 7.0
tr|Q0IXH9|Q0IXH9_ORYSJ Os10g0436800 protein OS=Oryza sativa subs... 33 7.0
tr|A3C525|A3C525_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.0

>tr|Q109M9|Q109M9_ORYSJ ENT domain containing protein, expressed
OS=Oryza sativa subsp. japonica GN=LOC_Os10g30054 PE=4
SV=1
Length = 658

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1

Query: 260 SGNIYTLSFINQEPGKQLPKCIYSNQKAGLFRDALLSPDNQTLILNQRTLCRSS 99
SGN YTLS++ P +QLP + S Q D L D +TL +T C S
Sbjct: 346 SGNEYTLSYLKSSPAEQLPVAVSSVQVKRSTDDPL---DTKTLPCEVKTGCTLS 396


>tr|Q0IXH9|Q0IXH9_ORYSJ Os10g0436800 protein OS=Oryza sativa subsp.
japonica GN=Os10g0436800 PE=4 SV=1
Length = 909

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1

Query: 260 SGNIYTLSFINQEPGKQLPKCIYSNQKAGLFRDALLSPDNQTLILNQRTLCRSS 99
SGN YTLS++ P +QLP + S Q D L D +TL +T C S
Sbjct: 566 SGNEYTLSYLKSSPAEQLPVAVSSVQVKRSTDDPL---DTKTLPCEVKTGCTLS 616


>tr|A3C525|A3C525_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_030397 PE=4 SV=1
Length = 765

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1

Query: 260 SGNIYTLSFINQEPGKQLPKCIYSNQKAGLFRDALLSPDNQTLILNQRTLCRSS 99
SGN YTLS++ P +QLP + S Q D L D +TL +T C S
Sbjct: 453 SGNEYTLSYLKSSPAEQLPVAVSSVQVKRSTDDPL---DTKTLPCEVKTGCTLS 503