| BP917811 |
| Clone id |
YMU001_000105_G04 |
| Library |
YMU01 |
| Length |
497 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000105_G04. |
| Accession |
BP917811 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1790Contig1 |
| Sequence |
ACGGGGCTCCTCCAAGCTTCTCCAAGTAAGGTTGTAGCTGAGATCATGGCGTTTGGATAC CAATCCAGCAGAGAGTCCTACAATACGCTCTGTATAGGAAGAATACTTCATCCAATCCTG ACCAAATATAGATGCCCTGGTCACAAAGGCAGCTGGGAAATCTTTAAACCTAGGATAGTA CAATCCAGCACTGAACTCTGTTGCACCATCCCAGCTATAACTACCAGTGCCATCCCAAGT TTCTGCACGCCCAAGGAGGTTCTTCAATTTCAAGGACCCTTCAAATATACAATTCCGTGT CTCAGGCTTGGTGTAAACTCCCATGTCACCAGAGTAGACTCTACTAGGTTCCTTTACACT CACAATGACATTGGCAGTACCAGGAAGCTCCACAGGCCCAGGCTCAAGACTGATGACACA CTCTTCAAATATTCCCAGGCTTTCAATATGAGCATTAGCACGCGCAACTTCCTGCAAAAG CTCATTGGACGTCTTTG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6AXV4 |
| Definition |
sp|Q6AXV4|SAM50_RAT Sorting and assembly machinery component 50 homolog OS=Rattus norvegicus |
| Align length |
172 |
| Score (bit) |
37.7 |
| E-value |
0.029 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TR39 |
| Definition |
tr|A9TR39|A9TR39_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
164 |
| Score (bit) |
196.0 |
| E-value |
7.0e-49 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917811|Adiantum capillus-veneris mRNA, clone: YMU001_000105_G04. (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TR39|A9TR39_PHYPA Predicted protein OS=Physcomitrella paten... 196 7e-49 tr|A9RN88|A9RN88_PHYPA Predicted protein OS=Physcomitrella paten... 192 1e-47 tr|A7Q3L8|A7Q3L8_VITVI Chromosome chr13 scaffold_48, whole genom... 173 4e-42 tr|A5C9V5|A5C9V5_VITVI Putative uncharacterized protein OS=Vitis... 173 4e-42 tr|B4FZ28|B4FZ28_MAIZE Putative uncharacterized protein OS=Zea m... 172 6e-42 tr|Q6ATX4|Q6ATX4_ORYSJ Os05g0470800 protein OS=Oryza sativa subs... 171 2e-41 tr|A2Y5M6|A2Y5M6_ORYSI Putative uncharacterized protein OS=Oryza... 171 2e-41 tr|Q9FFG3|Q9FFG3_ARATH Arabidopsis thaliana genomic DNA, chromos... 154 2e-36 tr|Q8LEH7|Q8LEH7_ARATH Putative uncharacterized protein OS=Arabi... 154 2e-36 tr|Q9SRL6|Q9SRL6_ARATH Putative uncharacterized protein F9F8.12 ... 144 2e-33 tr|A9PF20|A9PF20_POPTR Putative uncharacterized protein OS=Popul... 136 5e-31 tr|B6SPX1|B6SPX1_MAIZE Outer membrane protein, OMP85 family prot... 128 2e-28 tr|Q2RBM6|Q2RBM6_ORYSJ Outer membrane protein, OMP85 family prot... 120 4e-26 tr|Q2QYV1|Q2QYV1_ORYSJ Os12g0105700 protein OS=Oryza sativa subs... 120 4e-26 tr|Q0IV82|Q0IV82_ORYSJ Os11g0106200 protein (Fragment) OS=Oryza ... 120 4e-26 tr|B8BNT7|B8BNT7_ORYSI Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|B8BNT0|B8BNT0_ORYSI Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|B7EKD0|B7EKD0_ORYSJ cDNA clone:J013119I16, full insert sequen... 120 4e-26 tr|B7ECH1|B7ECH1_ORYSJ cDNA clone:J013071M22, full insert sequen... 120 4e-26 tr|A3CE62|A3CE62_ORYSJ Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|A3C7T7|A3C7T7_ORYSJ Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|B4FIX9|B4FIX9_MAIZE Putative uncharacterized protein OS=Zea m... 49 1e-04 tr|Q5KEW4|Q5KEW4_CRYNE Mitochondrion protein, putative OS=Crypto... 45 0.002 tr|Q4UAZ3|Q4UAZ3_THEAN Putative uncharacterized protein OS=Theil... 44 0.006 tr|B0DVC0|B0DVC0_LACBS Predicted protein OS=Laccaria bicolor (st... 43 0.007 tr|Q6ARL5|Q6ARL5_DESPS Related to outer membrane protein OS=Desu... 42 0.016 tr|Q1MB17|Q1MB17_RHIL3 Putative cell surface protein OS=Rhizobiu... 39 0.14 tr|B5ZSL3|B5ZSL3_RHILW Surface antigen (D15) OS=Rhizobium legumi... 39 0.14 tr|Q4TBF8|Q4TBF8_TETNG Chromosome undetermined SCAF7131, whole g... 38 0.23 tr|Q2K3J1|Q2K3J1_RHIEC Putative outer membrane protein, protecti... 38 0.23
>tr|A9TR39|A9TR39_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224626 PE=4 SV=1 Length = 471
Score = 196 bits (497), Expect = 7e-49 Identities = 92/164 (56%), Positives = 121/164 (73%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T ELLQE RAN+ + +LGIF++CVI+L+ GP ELPGTANVI+ V+E R++SGD+G++ Sbjct: 45 TMQELLQECVRANSRLRALGIFDKCVITLDAGPQELPGTANVILEVEEVKRLFSGDLGMF 104
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 +KPET+ EG++K KNL G AET D TG Y D +E SAG+ YPRFK PA+ TR Sbjct: 105 SKPETKAWTLEGTVKYKNLAGLAETLDATGCYGLDTTSELSAGVTYPRFKGLPASLATRL 164
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLV-SKRHDLSYNLTWRSLEEP 4 ++ QDW +YSSY ER+ G S GLV +HD+SYNLTWR L++P Sbjct: 165 TLLTQDWQRYSSYRERLTGFSVGLVGDNQHDISYNLTWRDLKDP 208
>tr|A9RN88|A9RN88_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116967 PE=4 SV=1 Length = 488
Score = 192 bits (487), Expect = 1e-47 Identities = 93/164 (56%), Positives = 119/164 (72%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T +LLQ+ A AN+ + +LGIF+ CVI+L+ GP ELPGTANVIV V+E R +SGD+GV+ Sbjct: 62 TMQDLLQKSAHANSRLRALGIFDSCVITLDAGPEELPGTANVIVEVEEAKRPFSGDLGVF 121
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 +KPET+ EG +K KNL G AET D TG Y D +E SAG+ YPRFK PA+ VTR Sbjct: 122 SKPETKAWTLEGLVKYKNLSGFAETIDATGCYGLDTTSELSAGVTYPRFKGLPASLVTRL 181
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLV-SKRHDLSYNLTWRSLEEP 4 ++ QDW +YSSY ER+ G S GLV +HD+SYNLTWR L++P Sbjct: 182 TLLTQDWKRYSSYRERLTGFSVGLVGDDQHDISYNLTWRDLKDP 225
>tr|A7Q3L8|A7Q3L8_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029336001 PE=4 SV=1 Length = 464
Score = 173 bits (439), Expect = 4e-42 Identities = 85/164 (51%), Positives = 108/164 (65%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T ELL+ AN S GIF+ I+L+ GP ELPGT NVIV V E +GD+G++ Sbjct: 42 TMQELLKAAGIANHRFHSFGIFDSVGITLDCGPPELPGTVNVIVDVVETKNPLTGDLGIF 101
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 TKPE R EGSLKLKNL G + WDG+ Y WD ++E SAG+ PRFK + R Sbjct: 102 TKPEARTWSLEGSLKLKNLFGYGDLWDGSLVYGWDQSSEISAGVSLPRFKGMVTPMLARV 161
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLVS-KRHDLSYNLTWRSLEEP 4 S+ QDW+K+SSY ER +GL+ GL+S KRHDL+YNL WR+L +P Sbjct: 162 SLLSQDWLKFSSYKERSLGLNLGLISTKRHDLTYNLLWRTLTDP 205
>tr|A5C9V5|A5C9V5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041873 PE=4 SV=1 Length = 564
Score = 173 bits (439), Expect = 4e-42 Identities = 85/164 (51%), Positives = 108/164 (65%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T ELL+ AN S GIF+ I+L+ GP ELPGT NVIV V E +GD+G++ Sbjct: 112 TMQELLKAAGIANHRFHSFGIFDSVGITLDCGPPELPGTVNVIVDVVETKNPLTGDLGIF 171
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 TKPE R EGSLKLKNL G + WDG+ Y WD ++E SAG+ PRFK + R Sbjct: 172 TKPEARTWSLEGSLKLKNLFGYGDLWDGSLVYGWDQSSEISAGVSLPRFKGMVTPMLARV 231
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLVS-KRHDLSYNLTWRSLEEP 4 S+ QDW+K+SSY ER +GL+ GL+S KRHDL+YNL WR+L +P Sbjct: 232 SLLSQDWLKFSSYKERSLGLNLGLISTKRHDLTYNLLWRTLTDP 275
>tr|B4FZ28|B4FZ28_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 401
Score = 172 bits (437), Expect = 6e-42 Identities = 83/164 (50%), Positives = 109/164 (66%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T +LL+ + A A + L IF+ I+L+ GP ELPGT NV++ V E + +G GVY Sbjct: 106 TVQDLLRAASVATARLHDLDIFDAVKITLDAGPPELPGTTNVVIEVVEVANPLTGTAGVY 165
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 +KPE R+ EGSLKLKNL G + WD +GS+ WD TE G+ PRFK P + RA Sbjct: 166 SKPEARSWSLEGSLKLKNLFGYGDIWDASGSFGWDQTTEVGVGVCLPRFKSIPTPLMARA 225
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLVSKR-HDLSYNLTWRSLEEP 4 S+ QDW+K+SSY ER++GLS GL+S R HDLSYNL WR+L +P Sbjct: 226 SLSSQDWLKFSSYKERLLGLSFGLLSTRNHDLSYNLAWRTLTDP 269
>tr|Q6ATX4|Q6ATX4_ORYSJ Os05g0470800 protein OS=Oryza sativa subsp. japonica GN=P0015C02.2 PE=4 SV=1 Length = 520
Score = 171 bits (433), Expect = 2e-41 Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T +LL+ + A+A + L +F+ I+L+ GP ELPGT NV+V V E + +G GVY Sbjct: 98 TVQDLLRNASIASARLRQLDVFDSVNITLDAGPPELPGTTNVVVEVVEAANPITGSAGVY 157
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 +KPE R+ EGS+KLKNL G + WD +G+YSWD +E G+ PRFK + RA Sbjct: 158 SKPEARSWSLEGSVKLKNLFGYGDIWDASGAYSWDQTSEVGIGVSLPRFKSISTPLMARA 217
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLVS-KRHDLSYNLTWRSLEEP 4 S+ QDW+K+SSY ER++GLS GL+S +HDLSYNLTWR+L +P Sbjct: 218 SLSSQDWLKFSSYKERLLGLSFGLISTMQHDLSYNLTWRTLTDP 261
>tr|A2Y5M6|A2Y5M6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20297 PE=4 SV=1 Length = 520
Score = 171 bits (433), Expect = 2e-41 Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T +LL+ + A+A + L +F+ I+L+ GP ELPGT NV+V V E + +G GVY Sbjct: 98 TVQDLLRNASIASARLRQLDVFDSVNITLDAGPPELPGTTNVVVEVVEAANPITGSAGVY 157
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 +KPE R+ EGS+KLKNL G + WD +G+YSWD +E G+ PRFK + RA Sbjct: 158 SKPEARSWSLEGSVKLKNLFGYGDIWDASGAYSWDQTSEVGIGVSLPRFKSISTPLMARA 217
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLVS-KRHDLSYNLTWRSLEEP 4 S+ QDW+K+SSY ER++GLS GL+S +HDLSYNLTWR+L +P Sbjct: 218 SLSSQDWLKFSSYKERLLGLSFGLISTMQHDLSYNLTWRTLTDP 261
>tr|Q9FFG3|Q9FFG3_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10 (Putative uncharacterized protein MOP10.6) OS=Arabidopsis thaliana GN=MOP10.6 PE=2 SV=1 Length = 524
Score = 154 bits (389), Expect = 2e-36 Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T ELL+ AN ++++L IF+ I+L+ GP ELPGT NV++ V E +G +G + Sbjct: 104 TLQELLKASKVANFNLQALDIFDSVKITLDSGPPELPGTTNVVIDVVESKSPITGQIGTF 163
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 TK E R+ EGSLK KN+ G + WDG+ +Y D + E G+Y PRF+ P F +R Sbjct: 164 TKAEARSSSLEGSLKYKNIFGYGDIWDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRV 223
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLV-SKRHDLSYNLTWRSLEEP 4 + QDW+K+SSY ER +GLS GL+ SK H+L+YN+ WR+L +P Sbjct: 224 YLSTQDWLKFSSYKERALGLSLGLIASKYHELAYNIAWRNLIDP 267
>tr|Q8LEH7|Q8LEH7_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 524
Score = 154 bits (389), Expect = 2e-36 Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T ELL+ AN ++++L IF+ I+L+ GP ELPGT NV++ V E +G +G + Sbjct: 104 TLQELLKASKVANFNLQALDIFDSVKITLDSGPPELPGTTNVVIDVVESKSPITGQIGTF 163
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 TK E R+ EGSLK KN+ G + WDG+ +Y D + E G+Y PRF+ P F +R Sbjct: 164 TKAEARSSSLEGSLKYKNIFGYGDIWDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRV 223
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLV-SKRHDLSYNLTWRSLEEP 4 + QDW+K+SSY ER +GLS GL+ SK H+L+YN+ WR+L +P Sbjct: 224 YLSTQDWLKFSSYKERALGLSLGLIASKYHELAYNIAWRNLIDP 267
>tr|Q9SRL6|Q9SRL6_ARATH Putative uncharacterized protein F9F8.12 (Putative uncharacterized protein At3g11070) (Putative uncharacterized protein F11B9.3) OS=Arabidopsis thaliana GN=F11B9.3 PE=2 SV=1 Length = 520
Score = 144 bits (363), Expect = 2e-33 Identities = 71/164 (43%), Positives = 100/164 (60%), Gaps = 1/164 (0%) Frame = -3
Query: 492 TSNELLQEVARANAHIESLGIFEECVISLEPGPVELPGTANVIVSVKEPSRVYSGDMGVY 313 T ELL+ AN+++ +L IF+ I+L+ GP ELPGT NV++ V E +G +G Y Sbjct: 107 TLQELLEASRVANSNLRALDIFDSVNITLDSGPPELPGTTNVVIDVVESKSPLTGQIGAY 166
Query: 312 TKPETRNCIFEGSLKLKNLLGRAETWDGTGSYSWDGATEFSAGLYYPRFKDFPAAFVTRA 133 T+ E R+ E SLK KN+ G + WDG+ Y D + E G+Y PRF+ F +R Sbjct: 167 TRAEARSSSVEASLKYKNIFGYGDIWDGSIVYGCDNSAEVGLGMYLPRFRGLSTPFTSRL 226
Query: 132 SIFGQDWMKYSSYTERIVGLSAGLV-SKRHDLSYNLTWRSLEEP 4 + QDW+K+SSY ER +GLS GL SK H+L Y + WR+L +P Sbjct: 227 FLSTQDWLKFSSYKERSLGLSLGLFSSKYHELIYTIAWRNLIDP 270
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