BP917812 |
Clone id |
YMU001_000105_G05 |
Library |
YMU01 |
Length |
522 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000105_G05. |
Accession |
BP917812 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2354Contig1 |
Sequence |
GATAGAAACTACTTGCTCTTTGCAATGGAATGGCCTAGAAACCGCTTCTTACAGTTATAT CTTGTATGTAACCTTCATAAGAACCACACAAAGGAAACGAGAAATAGGTGCCTTCAGAAA GGGAATTTCCAATCCAACAGGCCCCGAAACGGAGTTTCCTTGTGACTATGATCCCACCCA CAACAACAACTCTTTGTGAATTTCCACACACTGAAAGGTCTGTAACGGCACAAAATCACT TTCCTTGAGCTTTCATTCAAGCGAAAACAGCTGCTTCAACATTCATCCATCTGCTGTCCA AACAAAAGCCAAGAGCGCAATCGCCAATGAGAACGTGGTCACTACCGATGCTGCAACAAA TACAACAAATTGAGATGGTTTCTTCTCCTTGTTATCATCCTCCACCTGCTTAAGAAGCTG TCTTACATTGTTCACATCCCCATCCTTCGCTGCTTGCATGATTCTGCCTTCAATCTTTGC AAAAGCTTGCAGTCTAGCCTCTTGAAGCCTATCCTTGGAAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A3LR68 |
Definition |
sp|A3LR68|ATG5_PICST Autophagy protein 5 OS=Pichia stipitis |
Align length |
91 |
Score (bit) |
32.3 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S9I4 |
Definition |
tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
79 |
Score (bit) |
50.8 |
E-value |
4.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP917812|Adiantum capillus-veneris mRNA, clone: YMU001_000105_G05. (522 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella paten... 51 4e-05 tr|B8AJC0|B8AJC0_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.001 tr|A9RPY7|A9RPY7_PHYPA Predicted protein (Fragment) OS=Physcomit... 46 0.001 tr|Q6ESY2|Q6ESY2_ORYSJ Putative uncharacterized protein P0472F10... 46 0.001 tr|A3A7T0|A3A7T0_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001 tr|B6TX64|B6TX64_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002 tr|B8ATR5|B8ATR5_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.008 tr|A7Q7A1|A7Q7A1_VITVI Chromosome chr18 scaffold_59, whole genom... 43 0.011 tr|Q7X8A2|Q7X8A2_ORYSA OSJNBa0035I04.2 protein (OSIGBa0076I14.6 ... 42 0.014 tr|Q7F937|Q7F937_ORYSJ Os04g0423700 protein OS=Oryza sativa subs... 42 0.014 tr|A3ATW3|A3ATW3_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.014 tr|Q9XIG2|Q9XIG2_ARATH T10P12.6 protein (At1g43580/T10P12_6) OS=... 38 0.35 tr|Q8LD82|Q8LD82_ARATH Putative uncharacterized protein OS=Arabi... 38 0.35 tr|Q56YW4|Q56YW4_ARATH Putative uncharacterized protein At1g4358... 38 0.35 tr|Q91658|Q91658_XENLA XIR OS=Xenopus laevis GN=xir PE=2 SV=1 33 8.6 tr|Q788V5|Q788V5_XENLA XIR OS=Xenopus laevis GN=xir PE=2 SV=1 33 8.6
>tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126060 PE=4 SV=1 Length = 426
Score = 50.8 bits (120), Expect = 4e-05 Identities = 27/79 (34%), Positives = 43/79 (54%) Frame = -1
Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKPSQXXXXXXXXX 343 +SKD Q+ +L+ A +E + +AAK+GD+ +R +L +V E+K S+ Sbjct: 348 SSKDHNQKLKLKHLAAMEDDLQKAAKEGDLEGIRSMLNRVSKSGAEEKASERTLLLVAGS 407
Query: 342 XXXXSLAIALLAFVWTADG 286 +L + LLAF TADG Sbjct: 408 ILFMTLGLGLLAFKLTADG 426
>tr|B8AJC0|B8AJC0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07583 PE=4 SV=1 Length = 463
Score = 46.2 bits (108), Expect = 0.001 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%) Frame = -1
Query: 513 DRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXXXXX 337 D + RL K++ R+ QAAKD D++ +R LL +VE +E+K SQ Sbjct: 387 DNSRARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSFSSAMI 446
Query: 336 XXSLAIALLAFVWTADG 286 +L+ LLAF T+DG Sbjct: 447 VFTLSCVLLAFTLTSDG 463
>tr|A9RPY7|A9RPY7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_23480 PE=4 SV=1 Length = 424
Score = 46.2 bits (108), Expect = 0.001 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Frame = -1
Query: 519 SKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEK----KPSQXXXXXX 352 S+D+ +E +L+ A +E I +AAKDG++ + +L +V NK+ K S Sbjct: 343 SRDQQKELKLKLLAAVEDDIQKAAKDGNLEKITYMLNKVSTANKDNEQKDKVSYWFTMLL 402
Query: 351 XXXXXXXSLAIALLAFVWTADG 286 +L + LL F WTA+G Sbjct: 403 GCFVLFMTLGLGLLTFTWTANG 424
>tr|Q6ESY2|Q6ESY2_ORYSJ Putative uncharacterized protein P0472F10.21 OS=Oryza sativa subsp. japonica GN=P0472F10.21 PE=4 SV=1 Length = 355
Score = 45.8 bits (107), Expect = 0.001 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = -1
Query: 513 DRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXXXXX 337 D RL K++ R+ QAAKD D++ +R LL +VE +E+K SQ Sbjct: 279 DNSHARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSFSSAMI 338
Query: 336 XXSLAIALLAFVWTADG 286 +L+ LLAF T+DG Sbjct: 339 VFTLSCVLLAFTLTSDG 355
>tr|A3A7T0|A3A7T0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006852 PE=4 SV=1 Length = 259
Score = 45.8 bits (107), Expect = 0.001 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = -1
Query: 513 DRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXXXXX 337 D RL K++ R+ QAAKD D++ +R LL +VE +E+K SQ Sbjct: 183 DNSHARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSFSSAMI 242
Query: 336 XXSLAIALLAFVWTADG 286 +L+ LLAF T+DG Sbjct: 243 VFTLSCVLLAFTLTSDG 259
>tr|B6TX64|B6TX64_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 442
Score = 45.4 bits (106), Expect = 0.002 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Frame = -1
Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXX 346 +++D + RL +++ R++ AAKD D++ +R LLK+VE +E++ SQ Sbjct: 363 SARDLARARRLAKLEEVQSRLVHAAKDSDIDEIRGLLKEVELSGQERQGFSQRAILAFAA 422
Query: 345 XXXXXSLAIALLAFVWTADG 286 +L+ L+AF T+DG Sbjct: 423 GTIIFTLSCVLIAFTATSDG 442
>tr|B8ATR5|B8ATR5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15905 PE=4 SV=1 Length = 474
Score = 43.1 bits (100), Expect = 0.008 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = -1
Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKK-PSQXXXXXXXX 346 +++D + RL +++ R++ AAKD DV+ +R LLK+VE +EK+ SQ Sbjct: 395 SARDASRARRLAKLDEVQNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAILAFAA 454
Query: 345 XXXXXSLAIALLAFVWTADG 286 +L +LA T+DG Sbjct: 455 ATIIFTLTCVVLALTLTSDG 474
>tr|A7Q7A1|A7Q7A1_VITVI Chromosome chr18 scaffold_59, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031752001 PE=4 SV=1 Length = 432
Score = 42.7 bits (99), Expect = 0.011 Identities = 20/41 (48%), Positives = 29/41 (70%) Frame = -1
Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVE 400 ++KD + RL KI GR+ QAAKD +++ VR+LLK+VE Sbjct: 350 SAKDASRSKRLSRLDKIHGRLTQAAKDSNMDEVRELLKEVE 390
>tr|Q7X8A2|Q7X8A2_ORYSA OSJNBa0035I04.2 protein (OSIGBa0076I14.6 protein) OS=Oryza sativa GN=OSJNBa0035I04.2 PE=4 SV=1 Length = 449
Score = 42.4 bits (98), Expect = 0.014 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Frame = -1
Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKK-PSQXXXXXXXX 346 +++D + RL ++ R++ AAKD DV+ +R LLK+VE +EK+ SQ Sbjct: 370 SARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAILAFAA 429
Query: 345 XXXXXSLAIALLAFVWTADG 286 +L +LA T+DG Sbjct: 430 ATIIFTLTCVVLALTLTSDG 449
>tr|Q7F937|Q7F937_ORYSJ Os04g0423700 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0088C09.12 PE=4 SV=1 Length = 449
Score = 42.4 bits (98), Expect = 0.014 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Frame = -1
Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKK-PSQXXXXXXXX 346 +++D + RL ++ R++ AAKD DV+ +R LLK+VE +EK+ SQ Sbjct: 370 SARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAILAFAA 429
Query: 345 XXXXXSLAIALLAFVWTADG 286 +L +LA T+DG Sbjct: 430 ATIIFTLTCVVLALTLTSDG 449
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