BP917812
Clone id YMU001_000105_G05
Library
Length 522
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATAGAAACTACTTGCTCTTTGCAATGGAATGGCCTAGAAACCGCTTCTTACAGTTATAT
CTTGTATGTAACCTTCATAAGAACCACACAAAGGAAACGAGAAATAGGTGCCTTCAGAAA
GGGAATTTCCAATCCAACAGGCCCCGAAACGGAGTTTCCTTGTGACTATGATCCCACCCA
CAACAACAACTCTTTGTGAATTTCCACACACTGAAAGGTCTGTAACGGCACAAAATCACT
TTCCTTGAGCTTTCATTCAAGCGAAAACAGCTGCTTCAACATTCATCCATCTGCTGTCCA
AACAAAAGCCAAGAGCGCAATCGCCAATGAGAACGTGGTCACTACCGATGCTGCAACAAA
TACAACAAATTGAGATGGTTTCTTCTCCTTGTTATCATCCTCCACCTGCTTAAGAAGCTG
TCTTACATTGTTCACATCCCCATCCTTCGCTGCTTGCATGATTCTGCCTTCAATCTTTGC
AAAAGCTTGCAGTCTAGCCTCTTGAAGCCTATCCTTGGAAGT
■■Homology search results ■■ -
sp_hit_id A3LR68
Definition sp|A3LR68|ATG5_PICST Autophagy protein 5 OS=Pichia stipitis
Align length 91
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917812|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_G05.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A3LR68|ATG5_PICST Autophagy protein 5 OS=Pichia stipitis GN=A... 32 1.4
sp|Q89AY7|Y081_BUCBP Uncharacterized protein bbp_081 OS=Buchnera... 30 5.3
sp|Q3TYL0|YH010_MOUSE IQ motif and ankyrin repeat domain-contain... 30 7.0
sp|A0MZ67|SHOT1_RAT Shootin-1 OS=Rattus norvegicus PE=1 SV=1 30 7.0
sp|Q8K2Q9|SHOT1_MOUSE Shootin-1 OS=Mus musculus GN=Kiaa1598 PE=1... 30 7.0
sp|Q8BUR3|FOXJ3_MOUSE Forkhead box protein J3 OS=Mus musculus GN... 30 9.0
sp|Q00955|ACAC_YEAST Acetyl-CoA carboxylase OS=Saccharomyces cer... 30 9.1

>sp|A3LR68|ATG5_PICST Autophagy protein 5 OS=Pichia stipitis GN=ATG5
PE=3 SV=2
Length = 282

Score = 32.3 bits (72), Expect = 1.4
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +3

Query: 96 NEK*VPSEREFPIQQAPKRSFLVTMIPPTTTTLCE---FPHTERSVTAQN-----HFP*A 251
N+K VP ++ Q+ P R F+ P TTT+ + +P+ E T+ H P
Sbjct: 184 NKKIVPKDKA---QKIPVRIFI-----PGTTTIVQAPIYPYGEEEPTSMRDVLSLHLPHL 235

Query: 252 FIQAKTAASTFIHLLSKQKPRAQSPMRTWSL 344
F + + A +IH + Q + ++TW +
Sbjct: 236 FAEREAIALPYIHGIDTQSLLDEPLLKTWEI 266


>sp|Q89AY7|Y081_BUCBP Uncharacterized protein bbp_081 OS=Buchnera
aphidicola subsp. Baizongia pistaciae GN=bbp_081 PE=4
SV=1
Length = 717

Score = 30.4 bits (67), Expect = 5.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1

Query: 187 QLFVNFHTLKGL*RHKITFLELSFKRKQLLQHSSICCPNKSQERNRQ*ERGHYRCCNKYN 366
+LF NF + KG + FLEL F + ++ ++ C + + R R CC +Y
Sbjct: 163 ELFTNFFSSKGYWNKQ--FLELEFFKTDVVSINNFYCFDSTNNYCRFNSRNFLVCCRQYL 220

Query: 367 KL 372
K+
Sbjct: 221 KM 222


>sp|Q3TYL0|YH010_MOUSE IQ motif and ankyrin repeat domain-containing
protein LOC642574 homolog OS=Mus musculus PE=2 SV=2
Length = 343

Score = 30.0 bits (66), Expect = 7.0
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -1

Query: 516 KDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVE 400
K+ +E + + R+++AA +GD+ +RQ+LK+VE
Sbjct: 178 KEEAEERARREELQRRRRLLEAAFEGDLGEIRQVLKEVE 216


>sp|A0MZ67|SHOT1_RAT Shootin-1 OS=Rattus norvegicus PE=1 SV=1
Length = 633

Score = 30.0 bits (66), Expect = 7.0
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = -1

Query: 510 RLQEARLQAFAKI---EGRIMQAAKDGDVNNVRQLLKQVEDDNKE 385
+L+E R+Q K+ E R+ A +++N+RQ L+ +EDD +E
Sbjct: 275 QLEEERIQHQQKVKELEERLENEALHKEIHNLRQQLELLEDDKRE 319


>sp|Q8K2Q9|SHOT1_MOUSE Shootin-1 OS=Mus musculus GN=Kiaa1598 PE=1
SV=1
Length = 631

Score = 30.0 bits (66), Expect = 7.0
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = -1

Query: 510 RLQEARLQAFAKI---EGRIMQAAKDGDVNNVRQLLKQVEDDNKE 385
+L+E R+Q K+ E R+ A +++N+RQ L+ +EDD +E
Sbjct: 275 QLEEERIQHQKKVKELEERLENEALHKEIHNLRQQLELLEDDKRE 319


>sp|Q8BUR3|FOXJ3_MOUSE Forkhead box protein J3 OS=Mus musculus
GN=Foxj3 PE=2 SV=1
Length = 623

Score = 29.6 bits (65), Expect = 9.0
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Frame = +3

Query: 183 TTTLCEFPHTERSVTAQNHFP*AFIQAKTAASTFI-HLLSKQKPRAQSPMRTWSLPMLQQ 359
++T+ PH+ +S NH + + + A + H +P +P R LP Q
Sbjct: 337 SSTVTSHPHSNQSSLPNNHSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQ 396

Query: 360 I--------QQIEMVSSP-CYHPPPA*EAVLHCSHPHPSL 452
QQ + P HPPP H +H H +L
Sbjct: 397 RPQHPAPHPQQHSQLQPPHSQHPPPHQHIQHHPNHQHQTL 436


>sp|Q00955|ACAC_YEAST Acetyl-CoA carboxylase OS=Saccharomyces
cerevisiae GN=FAS3 PE=1 SV=2
Length = 2233

Score = 29.6 bits (65), Expect = 9.1
Identities = 12/47 (25%), Positives = 30/47 (63%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEK 382
T D+L+ +L++FA+ + +++ D ++ + +++K + D+KEK
Sbjct: 2181 TLDDKLKGLKLESFAQDLAKKIRSDHDNAIDGLSEVIKMLSTDDKEK 2227


tr_hit_id A9S9I4
Definition tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 79
Score (bit) 50.8
E-value 4.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917812|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_G05.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella paten... 51 4e-05
tr|B8AJC0|B8AJC0_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.001
tr|A9RPY7|A9RPY7_PHYPA Predicted protein (Fragment) OS=Physcomit... 46 0.001
tr|Q6ESY2|Q6ESY2_ORYSJ Putative uncharacterized protein P0472F10... 46 0.001
tr|A3A7T0|A3A7T0_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.001
tr|B6TX64|B6TX64_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002
tr|B8ATR5|B8ATR5_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.008
tr|A7Q7A1|A7Q7A1_VITVI Chromosome chr18 scaffold_59, whole genom... 43 0.011
tr|Q7X8A2|Q7X8A2_ORYSA OSJNBa0035I04.2 protein (OSIGBa0076I14.6 ... 42 0.014
tr|Q7F937|Q7F937_ORYSJ Os04g0423700 protein OS=Oryza sativa subs... 42 0.014
tr|A3ATW3|A3ATW3_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.014
tr|Q9XIG2|Q9XIG2_ARATH T10P12.6 protein (At1g43580/T10P12_6) OS=... 38 0.35
tr|Q8LD82|Q8LD82_ARATH Putative uncharacterized protein OS=Arabi... 38 0.35
tr|Q56YW4|Q56YW4_ARATH Putative uncharacterized protein At1g4358... 38 0.35
tr|Q91658|Q91658_XENLA XIR OS=Xenopus laevis GN=xir PE=2 SV=1 33 8.6
tr|Q788V5|Q788V5_XENLA XIR OS=Xenopus laevis GN=xir PE=2 SV=1 33 8.6

>tr|A9S9I4|A9S9I4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_126060 PE=4 SV=1
Length = 426

Score = 50.8 bits (120), Expect = 4e-05
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKPSQXXXXXXXXX 343
+SKD Q+ +L+ A +E + +AAK+GD+ +R +L +V E+K S+
Sbjct: 348 SSKDHNQKLKLKHLAAMEDDLQKAAKEGDLEGIRSMLNRVSKSGAEEKASERTLLLVAGS 407

Query: 342 XXXXSLAIALLAFVWTADG 286
+L + LLAF TADG
Sbjct: 408 ILFMTLGLGLLAFKLTADG 426


>tr|B8AJC0|B8AJC0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_07583 PE=4 SV=1
Length = 463

Score = 46.2 bits (108), Expect = 0.001
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1

Query: 513 DRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXXXXX 337
D + RL K++ R+ QAAKD D++ +R LL +VE +E+K SQ
Sbjct: 387 DNSRARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSFSSAMI 446

Query: 336 XXSLAIALLAFVWTADG 286
+L+ LLAF T+DG
Sbjct: 447 VFTLSCVLLAFTLTSDG 463


>tr|A9RPY7|A9RPY7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_23480 PE=4 SV=1
Length = 424

Score = 46.2 bits (108), Expect = 0.001
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -1

Query: 519 SKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEK----KPSQXXXXXX 352
S+D+ +E +L+ A +E I +AAKDG++ + +L +V NK+ K S
Sbjct: 343 SRDQQKELKLKLLAAVEDDIQKAAKDGNLEKITYMLNKVSTANKDNEQKDKVSYWFTMLL 402

Query: 351 XXXXXXXSLAIALLAFVWTADG 286
+L + LL F WTA+G
Sbjct: 403 GCFVLFMTLGLGLLTFTWTANG 424


>tr|Q6ESY2|Q6ESY2_ORYSJ Putative uncharacterized protein P0472F10.21
OS=Oryza sativa subsp. japonica GN=P0472F10.21 PE=4 SV=1
Length = 355

Score = 45.8 bits (107), Expect = 0.001
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1

Query: 513 DRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXXXXX 337
D RL K++ R+ QAAKD D++ +R LL +VE +E+K SQ
Sbjct: 279 DNSHARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSFSSAMI 338

Query: 336 XXSLAIALLAFVWTADG 286
+L+ LLAF T+DG
Sbjct: 339 VFTLSCVLLAFTLTSDG 355


>tr|A3A7T0|A3A7T0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_006852 PE=4 SV=1
Length = 259

Score = 45.8 bits (107), Expect = 0.001
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -1

Query: 513 DRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXXXXX 337
D RL K++ R+ QAAKD D++ +R LL +VE +E+K SQ
Sbjct: 183 DNSHARRLAKLDKVQNRLFQAAKDSDMDEIRGLLNEVELAGQERKGFSQRVILSFSSAMI 242

Query: 336 XXSLAIALLAFVWTADG 286
+L+ LLAF T+DG
Sbjct: 243 VFTLSCVLLAFTLTSDG 259


>tr|B6TX64|B6TX64_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 442

Score = 45.4 bits (106), Expect = 0.002
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKKP-SQXXXXXXXX 346
+++D + RL +++ R++ AAKD D++ +R LLK+VE +E++ SQ
Sbjct: 363 SARDLARARRLAKLEEVQSRLVHAAKDSDIDEIRGLLKEVELSGQERQGFSQRAILAFAA 422

Query: 345 XXXXXSLAIALLAFVWTADG 286
+L+ L+AF T+DG
Sbjct: 423 GTIIFTLSCVLIAFTATSDG 442


>tr|B8ATR5|B8ATR5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_15905 PE=4 SV=1
Length = 474

Score = 43.1 bits (100), Expect = 0.008
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKK-PSQXXXXXXXX 346
+++D + RL +++ R++ AAKD DV+ +R LLK+VE +EK+ SQ
Sbjct: 395 SARDASRARRLAKLDEVQNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAILAFAA 454

Query: 345 XXXXXSLAIALLAFVWTADG 286
+L +LA T+DG
Sbjct: 455 ATIIFTLTCVVLALTLTSDG 474


>tr|A7Q7A1|A7Q7A1_VITVI Chromosome chr18 scaffold_59, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00031752001
PE=4 SV=1
Length = 432

Score = 42.7 bits (99), Expect = 0.011
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVE 400
++KD + RL KI GR+ QAAKD +++ VR+LLK+VE
Sbjct: 350 SAKDASRSKRLSRLDKIHGRLTQAAKDSNMDEVRELLKEVE 390


>tr|Q7X8A2|Q7X8A2_ORYSA OSJNBa0035I04.2 protein (OSIGBa0076I14.6
protein) OS=Oryza sativa GN=OSJNBa0035I04.2 PE=4 SV=1
Length = 449

Score = 42.4 bits (98), Expect = 0.014
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKK-PSQXXXXXXXX 346
+++D + RL ++ R++ AAKD DV+ +R LLK+VE +EK+ SQ
Sbjct: 370 SARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAILAFAA 429

Query: 345 XXXXXSLAIALLAFVWTADG 286
+L +LA T+DG
Sbjct: 430 ATIIFTLTCVVLALTLTSDG 449


>tr|Q7F937|Q7F937_ORYSJ Os04g0423700 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0088C09.12 PE=4 SV=1
Length = 449

Score = 42.4 bits (98), Expect = 0.014
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -1

Query: 522 TSKDRLQEARLQAFAKIEGRIMQAAKDGDVNNVRQLLKQVEDDNKEKK-PSQXXXXXXXX 346
+++D + RL ++ R++ AAKD DV+ +R LLK+VE +EK+ SQ
Sbjct: 370 SARDASRARRLAKLDEVHNRLIHAAKDSDVDEIRGLLKEVELAGQEKQGVSQRAILAFAA 429

Query: 345 XXXXXSLAIALLAFVWTADG 286
+L +LA T+DG
Sbjct: 430 ATIIFTLTCVVLALTLTSDG 449