BP917814
Clone id YMU001_000105_G07
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAAACAAAGATGTACTGGTTACTTTGGATGGGGCTCGCGAGTGCAAATAGTAGAAAATGA
GCACAATGAGGAGTCAAACGTAAATAGACTTTTATACAAAAAAAGGGCACCAGTTTGACC
TGATTCGTTAGGCCACAGGATCGCACGACTTTAAGGAGGAGGTGCGAGTCATGCGTTACA
CATTTTAATGGCTGACATGCATATGAACATTGAATTGTGCACCTTGAGAGGTGGAGATTT
GCCTGAACGAATGAATATAAAGCGATGTGAGGAGGGGACCTAGCTGGCCTTTTGTATTGG
CAGCATTGACAAAAGCTTGGTTATGGAAGTCATGTCTGGACAAAGAGGTTTGAAAAGGCT
CAAGTGTGCTTGGGTGGAGACACTCAATTGAGCTCAGATGGCCTTACGCAGGTGGTTCCC
ATGGGAGGGAAGTTGTGGCAGTGGTCTGATAGGATATATGTAATGGGAATTCTCAATTGT
CACACGTAATAGTTTTAGCAATGGTTGTAAGTACTTCTTGGTGCAG
■■Homology search results ■■ -
sp_hit_id P73248
Definition sp|P73248|DHPS_SYNY3 Dihydropteroate synthase OS=Synechocystis sp. (strain PCC 6803)
Align length 28
Score (bit) 31.6
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917814|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_G07.
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P73248|DHPS_SYNY3 Dihydropteroate synthase OS=Synechocystis s... 32 2.4
sp|A1K1U7|LIPA_AZOSB Lipoyl synthase OS=Azoarcus sp. (strain BH7... 31 4.1
sp|Q9CRA4|ERG25_MOUSE C-4 methylsterol oxidase OS=Mus musculus G... 30 9.2

>sp|P73248|DHPS_SYNY3 Dihydropteroate synthase OS=Synechocystis sp.
(strain PCC 6803) GN=folP PE=3 SV=1
Length = 289

Score = 31.6 bits (70), Expect = 2.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1

Query: 394 SDGLTQVVPMGGKLWQWSDRIYVMGILN 477
SD +P+G L+ W R YVMGILN
Sbjct: 8 SDYFPPPLPVGQTLFDWGKRTYVMGILN 35


>sp|A1K1U7|LIPA_AZOSB Lipoyl synthase OS=Azoarcus sp. (strain BH72)
GN=lipA PE=3 SV=1
Length = 315

Score = 30.8 bits (68), Expect = 4.1
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1

Query: 412 PA*GHLSSIECLHPSTLEPFQTSLSRHDFHNQAFVNAANTKGQLGPLLTSLY 257
P+ GHL + +HP T + F+T R F N A GP++ S Y
Sbjct: 262 PSGGHLPVLRYVHPDTFKMFETEALRMGFRNAA----------CGPMVRSSY 303


>sp|Q9CRA4|ERG25_MOUSE C-4 methylsterol oxidase OS=Mus musculus
GN=Sc4mol PE=2 SV=1
Length = 293

Score = 29.6 bits (65), Expect = 9.2
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1

Query: 379 LHPSTLEPFQTSLSRHDFHNQAFV-NAANT 293
L+P L PF T HDFH+ F+ N A+T
Sbjct: 235 LNPLNLVPFYTGARHHDFHHMNFIGNYAST 264


tr_hit_id Q9SZV3
Definition tr|Q9SZV3|Q9SZV3_ARATH At4g30000 OS=Arabidopsis thaliana
Align length 36
Score (bit) 46.6
E-value 0.0008
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917814|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_G07.
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SZV3|Q9SZV3_ARATH At4g30000 OS=Arabidopsis thaliana GN=AT4g... 47 8e-04
tr|Q9LE77|Q9LE77_ARATH Putative dihydropterin pyrophosphokinase/... 44 0.005
tr|Q1ENB6|Q1ENB6_ARATH 6-hydroxymethyl-7,8-dihydropterin pyropho... 44 0.005
tr|Q7X7X0|Q7X7X0_ORYSJ Os07g0618500 protein OS=Oryza sativa subs... 43 0.009
tr|Q69V07|Q69V07_ORYSJ Putative 2-amino-4-hydroxy-6-hydroxymethy... 43 0.009
tr|B8B8L1|B8B8L1_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.009
tr|A3BM85|A3BM85_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.009
tr|A7P2D7|A7P2D7_VITVI Chromosome chr1 scaffold_5, whole genome ... 42 0.025
tr|A4UIY8|A4UIY8_WHEAT HPPK/DHPS OS=Triticum aestivum PE=2 SV=1 39 0.12
tr|B8A1T6|B8A1T6_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.21
tr|O04862|O04862_PEA Dihydropterin pyrophosphokinase /dihydropte... 38 0.36
tr|A4RZ18|A4RZ18_OSTLU Predicted protein (Fragment) OS=Ostreococ... 36 1.4
tr|Q1PDE8|Q1PDE8_9CRUS Plexin-like protein (Fragment) OS=Gammaru... 35 2.3
tr|A9S7G1|A9S7G1_PHYPA Predicted protein (Fragment) OS=Physcomit... 34 4.0
tr|A8PYT9|A8PYT9_MALGO Putative uncharacterized protein OS=Malas... 33 6.7
tr|B7C2V1|B7C2V1_9FIRM Putative uncharacterized protein OS=Roseb... 33 8.6

>tr|Q9SZV3|Q9SZV3_ARATH At4g30000 OS=Arabidopsis thaliana
GN=AT4g30000 PE=2 SV=1
Length = 554

Score = 46.6 bits (109), Expect = 8e-04
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + DG+ +V+P+G KLW +S++ +VMGILN
Sbjct: 245 LGGESLIGQDGIQRVLPIGDKLWDFSNKTHVMGILN 280


>tr|Q9LE77|Q9LE77_ARATH Putative dihydropterin
pyrophosphokinase/dihydropteroate synthase; 82398-83777
(F4N2.15) OS=Arabidopsis thaliana GN=F23O10.22 PE=4 SV=1
Length = 459

Score = 43.9 bits (102), Expect = 0.005
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQ-VVPMGGKLWQWSDRIYVMGILN 477
LGG++ L DG+ Q V+P+G LW +S + YVMGILN
Sbjct: 148 LGGESLLGKDGIIQRVIPIGDHLWDFSKKTYVMGILN 184


>tr|Q1ENB6|Q1ENB6_ARATH 6-hydroxymethyl-7,8-dihydropterin
pyrophosphokinase/7,8-dihydropteroate synthase
OS=Arabidopsis thaliana GN=hppk/dhps2 PE=2 SV=1
Length = 484

Score = 43.9 bits (102), Expect = 0.005
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQ-VVPMGGKLWQWSDRIYVMGILN 477
LGG++ L DG+ Q V+P+G LW +S + YVMGILN
Sbjct: 173 LGGESLLGKDGIIQRVIPIGDHLWDFSKKTYVMGILN 209


>tr|Q7X7X0|Q7X7X0_ORYSJ Os07g0618500 protein OS=Oryza sativa subsp.
japonica GN=P0552F09.130-1 PE=2 SV=1
Length = 532

Score = 43.1 bits (100), Expect = 0.009
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + ++G+ +V+P+G +L WS+R VMG+LN
Sbjct: 226 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 261


>tr|Q69V07|Q69V07_ORYSJ Putative
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
diphosphokinase OS=Oryza sativa subsp. japonica
GN=P0560B08.103-2 PE=4 SV=1
Length = 522

Score = 43.1 bits (100), Expect = 0.009
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + ++G+ +V+P+G +L WS+R VMG+LN
Sbjct: 216 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 251


>tr|B8B8L1|B8B8L1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_26885 PE=4 SV=1
Length = 604

Score = 43.1 bits (100), Expect = 0.009
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + ++G+ +V+P+G +L WS+R VMG+LN
Sbjct: 306 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 341


>tr|A3BM85|A3BM85_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_024157 PE=4 SV=1
Length = 1303

Score = 43.1 bits (100), Expect = 0.009
Identities = 16/36 (44%), Positives = 28/36 (77%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + ++G+ +V+P+G +L WS+R VMG+LN
Sbjct: 904 LGGESIIGTEGIKRVLPVGNRLLDWSERTLVMGVLN 939


>tr|A7P2D7|A7P2D7_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030018001
PE=4 SV=1
Length = 483

Score = 41.6 bits (96), Expect = 0.025
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + +GL +V+P G LW WS + +MGILN
Sbjct: 186 LGGESLIGKNGLKRVLPTGNVLWDWSLKTSMMGILN 221


>tr|A4UIY8|A4UIY8_WHEAT HPPK/DHPS OS=Triticum aestivum PE=2 SV=1
Length = 530

Score = 39.3 bits (90), Expect = 0.12
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + + G+ +V+ +G +L WS+R +MG+LN
Sbjct: 225 LGGESLIGTQGIKRVMAVGNRLLDWSERTLIMGVLN 260


>tr|B8A1T6|B8A1T6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 526

Score = 38.5 bits (88), Expect = 0.21
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +1

Query: 370 LGGDTQLSSDGLTQVVPMGGKLWQWSDRIYVMGILN 477
LGG++ + ++ + +V+P+G +L W +R VMG+LN
Sbjct: 216 LGGESIIGTESIKRVLPVGDRLLDWCERTLVMGVLN 251