BP917817
Clone id YMU001_000105_G11
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GACATACTTTTCATATAAAGAGGGTGTTTGGCATGCATGCCAGTTGCATATATAGATTGT
AAGGCATTTCAAACCCAAAAACTTGTACTAGAAACCGAGATATGTGAGCACCGCTTATAC
AAGGAAGATGCTATGTTGAGTTTTAGTACTCGGAGAGCTCACATGGATGGACTTATTGGT
TGTACATGGAGCTTGCATTAGTAGGAGTGTTCATTGTGCTAAGGGGGTTTCCAAGATACC
TTGTTGGACCATTGGACATTGCCAATGCAACGACTGTACATGGCAATTGATTTTCTTGGG
ACTTACGTAGGAATTTGTGTTTCTCTTCATACATCTTCGCTAGTGCCTTCGTCCCTGGGA
TGCCTTGTTCCAGGACTTGTTTTCTGTAACAAACCTAATTCTTTGGTTTATGCCAATGTC
ATGACTTCATCCATGTGAACAACTCCACCAAGTCCCTAGCTTCAATGCTTGCTGGTAATG
TAGATCTTCTCCTCAGGACTCAAGTCAAGTGTGGTTACAGATGGTGTTAT
■■Homology search results ■■ -
sp_hit_id Q4UK27
Definition sp|Q4UK27|NUOL_RICFE NADH-quinone oxidoreductase subunit L OS=Rickettsia felis
Align length 59
Score (bit) 29.6
E-value 8.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917817|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_G11.
(515 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4UK27|NUOL_RICFE NADH-quinone oxidoreductase subunit L OS=Ri... 30 8.7

>sp|Q4UK27|NUOL_RICFE NADH-quinone oxidoreductase subunit L
OS=Rickettsia felis GN=nuoL PE=3 SV=1
Length = 645

Score = 29.6 bits (65), Expect = 8.7
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1

Query: 226 LLDHWTLPMQRLYMAIDFLGTYVGICV--SLHTSSLVPSSLGCLVPGLVFCNKPNSLVY 396
L+ H L ++ L MA+ +G +GICV S S PSS+ P +KP +LVY
Sbjct: 504 LISHPPLYIKLLPMAVGIMGIVIGICVYNSSTIMSFRPSSMS--FPRKRESSKPFNLVY 560


tr_hit_id A2BZ05
Definition tr|A2BZ05|A2BZ05_PROM5 Putative uncharacterized protein OS=Prochlorococcus marinus (strain MIT 9515)
Align length 45
Score (bit) 37.0
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917817|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_G11.
(515 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2BZ05|A2BZ05_PROM5 Putative uncharacterized protein OS=Proch... 37 0.58
tr|B0DY69|B0DY69_LACBS Predicted protein OS=Laccaria bicolor (st... 35 2.2
tr|A8BMC6|A8BMC6_GIALA Tenascin-X OS=Giardia lamblia ATCC 50803 ... 35 2.9

>tr|A2BZ05|A2BZ05_PROM5 Putative uncharacterized protein
OS=Prochlorococcus marinus (strain MIT 9515)
GN=P9515_18091 PE=4 SV=1
Length = 153

Score = 37.0 bits (84), Expect = 0.58
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1

Query: 238 WTLPMQRLYMAIDFLGTYVGICVSLHTSSLVPSSLGCLVPGLVFC 372
W LP +Y +ID G VG+C+ L S+ P++ +PGL+ C
Sbjct: 14 WLLPWSMIYGSID--GLIVGLCLGLVLDSISPNNGFTQIPGLILC 56


>tr|B0DY69|B0DY69_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_334135 PE=4 SV=1
Length = 499

Score = 35.0 bits (79), Expect = 2.2
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1

Query: 235 HWTLPMQRLYMAIDFLGTYVGICVSLHTSSLVPSSLGCLVPGLVFCNKPNS 387
HW P + + LG YV L S+ P S+ CL PG +FC++P S
Sbjct: 410 HWPEPED---LILSVLGAYVAADGKLTCST--PVSVNCLEPGWIFCDRPTS 455


>tr|A8BMC6|A8BMC6_GIALA Tenascin-X OS=Giardia lamblia ATCC 50803
GN=GL50803_14047 PE=4 SV=1
Length = 401

Score = 34.7 bits (78), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2

Query: 146 TWMDLLVVHGACISRSVHCAKGVSKIPCWTIGHCQCN 256
T + L+ HG C++ + K S+ CW G+CQ N
Sbjct: 71 TGLTLMSFHGRCVTENCLIGKEPSRTECWNRGYCQIN 107