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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP917818
Clone id YMU001_000105_H01
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGGACAACTCTTGGTTTATTTCCAACAAGAAAAAAACTATGAATCACAAAATCTCGTTC
AATCTATCGACTGCTAGGCGACATGACAAGAGAATATCAACAAAGCTTGTATTATCACAA
GTTCGATATCAGGAATCAGGTTCCACCACATCTGGCTTATAATGCCACTACCTTGTAAAG
GCCTTGCTCCAGCCTCTTTGATACGTCTACAAAATGAAGAAGGGCTACTTGCACTCCTTC
GTTCCTGCAAGAGCTATGATGCTATGTGAACAACACTTCGGAAAGAAAATGCCAGTAGTT
TCCTCGATACAATTGCCATGGGAGCCAACTGCTGGGATAGGCTATGTTATATGTTAAAGT
TTGCAAACAGTCAAAGAGTTCCTCTCCAGACTCACGCGATAGCCACAGAATGACTATCAA
GTAAACCGACCGGAGCCACTGCATTTATGGCTGCACCTCTTCTCATCAGTTCGTGATCCA
AAAACACCACAATAACTGTGATATCGTCATGAAAATGACGTCTCACGCCTCTC
■■Homology search results ■■ -
sp_hit_id Q5Z8P0
Definition sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica
Align length 27
Score (bit) 46.6
E-value 8.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917818|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H01.
         (533 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryz...    47   8e-05
sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryz...    47   8e-05
sp|Q6ZHC8|P2C25_ORYSJ Probable protein phosphatase 2C 25 OS=Oryz...    46   1e-04
sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryz...    43   8e-04
sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryz...    42   0.002
sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryz...    42   0.002
sp|Q7XHN8|P2C61_ORYSJ Probable protein phosphatase 2C 61 OS=Oryz...    42   0.002
sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryz...    41   0.003
sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryz...    40   0.009
sp|Q7Y138|P2C36_ORYSJ Probable protein phosphatase 2C 36 OS=Oryz...    39   0.012
sp|Q8H063|P2C29_ORYSJ Probable protein phosphatase 2C 29 OS=Oryz...    38   0.027
sp|P31979|NUOF_ECOLI NADH-quinone oxidoreductase subunit F OS=Es...    30   5.6  
sp|P33901|NUOF_SALTY NADH-quinone oxidoreductase subunit F OS=Sa...    30   7.3  

>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza
           sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1
          Length = 392

 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGA 452
           RGVRRHFHDDITVIVVFLD  L+ R +
Sbjct: 338 RGVRRHFHDDITVIVVFLDSSLVSRAS 364


>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza
           sativa subsp. japonica GN=Os04g0584366 PE=2 SV=2
          Length = 388

 Score = 46.6 bits (109), Expect = 8e-05
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRG 455
           +GVRR FHDDITV+VVF+DHEL++ G
Sbjct: 335 KGVRRFFHDDITVVVVFIDHELLQDG 360


>sp|Q6ZHC8|P2C25_ORYSJ Probable protein phosphatase 2C 25 OS=Oryza
           sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1
          Length = 387

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 20/41 (48%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMR-RGAAINAVAPVGLLDS 413
           +GVRR FHDDITV+VV++DHEL++ +  ++  ++  G +DS
Sbjct: 334 KGVRRFFHDDITVVVVYIDHELLQEKNVSVPELSVRGFVDS 374


>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza
           sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1
          Length = 399

 Score = 43.1 bits (100), Expect = 8e-04
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLD 476
           RGVRRHFHDDITVIVVFLD
Sbjct: 339 RGVRRHFHDDITVIVVFLD 357


>sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryza
           sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1
          Length = 380

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAI-----NAV-APVGLLDSHS 407
           +GVRRHFHDDI+VIVV+LD    RR   +     N   APV +  S+S
Sbjct: 318 KGVRRHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNS 365


>sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryza
           sativa subsp. indica GN=BIPP2C2 PE=2 SV=2
          Length = 380

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAI-----NAV-APVGLLDSHS 407
           +GVRRHFHDDI+VIVV+LD    RR   +     N   APV +  S+S
Sbjct: 318 KGVRRHFHDDISVIVVYLDRHRGRRHTRVVDSSSNCTNAPVDIYSSNS 365


>sp|Q7XHN8|P2C61_ORYSJ Probable protein phosphatase 2C 61 OS=Oryza
           sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1
          Length = 377

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLD------HELMRRGAAINA 440
           RGVRRHFHDDIT +VVFLD          RRG  +++
Sbjct: 321 RGVRRHFHDDITAVVVFLDLDDDGGRRARRRGRVVDS 357


>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza
           sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1
          Length = 393

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLD 476
           RGVRRHFHDDITV+VVF D
Sbjct: 340 RGVRRHFHDDITVVVVFFD 358


>sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza
           sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1
          Length = 392

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDH 473
           RG RR+FHDDITV+VV+LDH
Sbjct: 325 RGSRRNFHDDITVVVVYLDH 344


>sp|Q7Y138|P2C36_ORYSJ Probable protein phosphatase 2C 36 OS=Oryza
           sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1
          Length = 386

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 15/24 (62%), Positives = 22/24 (91%)
 Frame = -2

Query: 526 VRRHFHDDITVIVVFLDHELMRRG 455
           VRRHFHDDITVIV+F++++ + +G
Sbjct: 348 VRRHFHDDITVIVLFINYDQLAKG 371
tr_hit_id A9SV72
Definition tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 30
Score (bit) 51.6
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP917818|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H01.
         (533 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella paten...    52   2e-05
tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea...    51   4e-05
tr|A9TD47|A9TD47_PHYPA Predicted protein OS=Physcomitrella paten...    51   4e-05
tr|Q9ZSQ7|Q9ZSQ7_MESCR Protein phosphatase 2C homolog OS=Mesembr...    50   7e-05
tr|A7PVW6|A7PVW6_VITVI Chromosome chr8 scaffold_34, whole genome...    50   9e-05
tr|B7FLN0|B7FLN0_MEDTR Putative uncharacterized protein OS=Medic...    49   1e-04
tr|B7FJF3|B7FJF3_MEDTR Putative uncharacterized protein OS=Medic...    49   1e-04
tr|A5B0L3|A5B0L3_VITVI Putative uncharacterized protein OS=Vitis...    49   2e-04
tr|A9TNG1|A9TNG1_PHYPA Predicted protein OS=Physcomitrella paten...    49   2e-04
tr|Q9SZN2|Q9SZN2_ARATH Putative uncharacterized protein F20M13.8...    48   3e-04
tr|Q9M3V0|Q9M3V0_FAGSY Protein phosphatase 2C (PP2C) OS=Fagus sy...    48   3e-04
tr|Q8W4N8|Q8W4N8_ARATH Putative uncharacterized protein At4g3852...    48   3e-04
tr|Q5PNS9|Q5PNS9_ARATH At4g38520 OS=Arabidopsis thaliana PE=2 SV=1     48   3e-04
tr|A7P8E3|A7P8E3_VITVI Chromosome chr3 scaffold_8, whole genome ...    48   3e-04
tr|A5C806|A5C806_VITVI Putative uncharacterized protein OS=Vitis...    48   3e-04
tr|A9RIX5|A9RIX5_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|A7Q409|A7Q409_VITVI Chromosome chr13 scaffold_48, whole genom...    47   5e-04
tr|B6SYG9|B6SYG9_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1    47   6e-04
tr|B6SV58|B6SV58_MAIZE Protein phosphatase 2C OS=Zea mays PE=2 SV=1    47   6e-04
tr|Q9LSN8|Q9LSN8_ARATH Protein phosphatase 2C-like protein OS=Ar...    47   8e-04
tr|Q9LHJ9|Q9LHJ9_ARATH Protein phosphatase 2C (Putative uncharac...    47   8e-04
tr|Q9C7B3|Q9C7B3_ARATH Protein phosphatase 2C, putative; 16828-1...    47   8e-04
tr|Q8LEW2|Q8LEW2_ARATH Protein phosphatase-2c, putative OS=Arabi...    47   8e-04
tr|Q0V7V2|Q0V7V2_ARATH At3g17090 OS=Arabidopsis thaliana PE=2 SV=1     47   8e-04
tr|B8B2J1|B8B2J1_ORYSI Putative uncharacterized protein OS=Oryza...    47   8e-04
tr|A3BFG0|A3BFG0_ORYSJ Putative uncharacterized protein OS=Oryza...    47   8e-04
tr|A2XWU4|A2XWU4_ORYSI Putative uncharacterized protein OS=Oryza...    47   8e-04
tr|Q9FKX4|Q9FKX4_ARATH Protein phosphatase 2C-like protein OS=Ar...    46   0.001
tr|O82479|O82479_MESCR Protein phosphatase-2c (Fragment) OS=Mese...    46   0.001
tr|A7PSU5|A7PSU5_VITVI Chromosome chr8 scaffold_29, whole genome...    46   0.001

>tr|A9SV72|A9SV72_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_107052 PE=4 SV=1
          Length = 371

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAIN 443
           RG+RRHFHDDITV+VVFLDH L+  G+ I+
Sbjct: 329 RGIRRHFHDDITVVVVFLDHNLVSNGSGIS 358


>tr|B8LQT5|B8LQT5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 209

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELM----RRGAAINAVAPVGLLDSHSVA 401
           RGVRRHFHDDITVIVVFLDH L+     RG  I+ +     + S+S+A
Sbjct: 152 RGVRRHFHDDITVIVVFLDHSLISKFSSRGPTISIIGGGTTVPSNSLA 199


>tr|A9TD47|A9TD47_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_193911 PE=4 SV=1
          Length = 371

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAIN 443
           RG+RRHFHDDITV+VVFLDH L+  G++ +
Sbjct: 329 RGIRRHFHDDITVVVVFLDHNLLSNGSSFS 358


>tr|Q9ZSQ7|Q9ZSQ7_MESCR Protein phosphatase 2C homolog
           OS=Mesembryanthemum crystallinum GN=PP2C PE=2 SV=1
          Length = 396

 Score = 50.1 bits (118), Expect = 7e-05
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAI 446
           RGVRRHFHDDITV+VVFLD  L+ RG+++
Sbjct: 337 RGVRRHFHDDITVVVVFLDSNLISRGSSV 365


>tr|A7PVW6|A7PVW6_VITVI Chromosome chr8 scaffold_34, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00025384001
           PE=4 SV=1
          Length = 390

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 19/40 (47%), Positives = 32/40 (80%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAINAVAPVGLLDS 413
           +GVRR FHDDITV+V++LDHE++R+  ++  ++  G +D+
Sbjct: 333 KGVRRFFHDDITVVVIYLDHEVLRKNFSVPELSVRGFIDT 372


>tr|B7FLN0|B7FLN0_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 266

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAI 446
           RGVRRHFHDDITVIVVFLD  LM R + +
Sbjct: 207 RGVRRHFHDDITVIVVFLDSNLMSRASTV 235


>tr|B7FJF3|B7FJF3_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 378

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 22/29 (75%), Positives = 24/29 (82%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAI 446
           RGVRRHFHDDITVIVVFLD  LM R + +
Sbjct: 338 RGVRRHFHDDITVIVVFLDSNLMSRASTV 366


>tr|A5B0L3|A5B0L3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_040860 PE=4 SV=1
          Length = 398

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 19/40 (47%), Positives = 31/40 (77%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAINAVAPVGLLDS 413
           +GVRR FHDDITV+V++LDHE +R+  ++  ++  G +D+
Sbjct: 333 KGVRRFFHDDITVVVIYLDHEXLRKNFSVPELSVRGFIDT 372


>tr|A9TNG1|A9TNG1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110476 PE=4 SV=1
          Length = 388

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 19/30 (63%), Positives = 27/30 (90%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAIN 443
           RG+RRHFHDDITV+V++LD +L+ RG +I+
Sbjct: 328 RGIRRHFHDDITVVVLYLDTKLLNRGGSIS 357


>tr|Q9SZN2|Q9SZN2_ARATH Putative uncharacterized protein F20M13.80
           (Putative uncharacterized protein AT4g38520)
           OS=Arabidopsis thaliana GN=F20M13.80 PE=2 SV=1
          Length = 395

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 22/33 (66%), Positives = 25/33 (75%)
 Frame = -2

Query: 532 RGVRRHFHDDITVIVVFLDHELMRRGAAINAVA 434
           RGVRRHFHDDITVIVVF D  L+ RG+ +   A
Sbjct: 333 RGVRRHFHDDITVIVVFFDTNLVSRGSMLRGPA 365