BP917819
Clone id YMU001_000105_H02
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000105_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCACAGAGGCTCTTCACTGATGTATAGTGCGCTATCCTTTAAGTAGATGCGAGCGTTTTC
GAGGATAATAGCCCTCTTGCGGACATCCAGAAGTGTGCATACGATTGCCCGATTTGCTTA
TGGTTTCTTCTTGCCTACTCAATGTGCACCATATACCACCACATCATGCATTCCGAAGTT
AGCAGAGATCATTTCCGTGATGTCGGTGTTCGAGGTAATGACCTTCTCGTTGTCGGATTC
GGGGATGCCCCGTATCACGATGTTCATTTTTCTTTTCTCTTGTTCGGTGTATTCTTTGTC
ATCCTCATTAGCATACATGTCTCTGTTCATTGAGAAAGTCTGAGGCATTGGTGTGTATGT
CAATGCATCTTTCCAAGAGCCCACATTTTCAGATACATTAATTTGCATAATCTTTTCATC
ATGTGTGGCTAGCGTGTCTTGCATTGTAAGCTGTGTGCTTATCAAGAGCACCCTGGAGCT
CCTGCATCTTCTCCTCTTGGTGACGGACTCGTAGTTCTT
■■Homology search results ■■ -
sp_hit_id Q9HDZ2
Definition sp|Q9HDZ2|CWH43_SCHPO Protein cwh43 OS=Schizosaccharomyces pombe
Align length 57
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917819|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H02.
(519 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9HDZ2|CWH43_SCHPO Protein cwh43 OS=Schizosaccharomyces pombe... 32 1.4
sp|O74380|YNV5_SCHPO Uncharacterized membrane protein C3H7.05c O... 32 1.8
sp|Q8K2V6|IPO11_MOUSE Importin-11 OS=Mus musculus GN=Ipo11 PE=1 ... 32 1.8
sp|P43766|RPOD_HAEIN RNA polymerase sigma factor rpoD OS=Haemoph... 32 2.4
sp|Q2LCP5|NDUS1_DICCI NADH-ubiquinone oxidoreductase 75 kDa subu... 31 4.0
sp|Q6XUX2|RIPK5_RAT Receptor-interacting serine/threonine-protei... 30 5.3
sp|Q4TVR5|RIPK5_BOVIN Receptor-interacting serine/threonine-prot... 30 5.3
sp|P25618|CWH43_YEAST Protein CWH43 OS=Saccharomyces cerevisiae ... 30 5.3
sp|O31948|YONJ_BACSU SPBc2 prophage-derived uncharacterized prot... 30 6.8
sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protei... 30 6.9
sp|Q88FR9|MNMA_PSEPK tRNA-specific 2-thiouridylase mnmA OS=Pseud... 30 8.8
sp|Q1IBE4|MNMA_PSEE4 tRNA-specific 2-thiouridylase mnmA OS=Pseud... 30 8.8
sp|Q68FE8|Z280D_MOUSE Zinc finger protein 280D OS=Mus musculus G... 30 9.0
sp|Q6XUX1|RIPK5_MOUSE Receptor-interacting serine/threonine-prot... 30 9.0
sp|P17971|KCNAL_DROME Potassium voltage-gated channel protein Sh... 30 9.0
sp|A5N2X7|DNLJ_CLOK5 DNA ligase OS=Clostridium kluyveri (strain ... 30 9.0

>sp|Q9HDZ2|CWH43_SCHPO Protein cwh43 OS=Schizosaccharomyces pombe
GN=cwh43 PE=2 SV=2
Length = 971

Score = 32.3 bits (72), Expect = 1.4
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ MYA+E+ R M + + G+ ESD +++I D+T++++ + GM+
Sbjct: 715 FGLDNFMYASENR---IRDAVRDMELDVFGLLESDTQRLIMGFRDLTQVLAHDLGMY 768


>sp|O74380|YNV5_SCHPO Uncharacterized membrane protein C3H7.05c
OS=Schizosaccharomyces pombe GN=SPBC3H7.05c PE=2 SV=1
Length = 357

Score = 32.0 bits (71), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1

Query: 94 CAYDCPICLWFLLAYSMCTIYHHIMHSEVS 183
C C I + +LAY MC +YHH+ + +VS
Sbjct: 46 CTLLCSITV--ILAYRMCAVYHHVGYKDVS 73


>sp|Q8K2V6|IPO11_MOUSE Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1
Length = 975

Score = 32.0 bits (71), Expect = 1.8
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = -1

Query: 510 ESVTKRRRCRSSRVLLISTQLTMQDTLATHDEKIMQINVSENVGSWKDALTYTPMPQTF- 334
+++T+ R + S + L+S L D D+ IN+S V + D +T P +T+
Sbjct: 837 DNITQPERKKLSALALLS--LLPSDNSVIQDKFCGIINIS--VEALHDVMTEDPETRTYK 892

Query: 333 -----SMNRDMYANEDDKEYTEQEKRKMNIVIR 250
S + + ED++ TEQ+KRK + ++
Sbjct: 893 DCMLMSQHEEPKVTEDEEPPTEQDKRKKMLALK 925


>sp|P43766|RPOD_HAEIN RNA polymerase sigma factor rpoD
OS=Haemophilus influenzae GN=rpoD PE=3 SV=1
Length = 629

Score = 31.6 bits (70), Expect = 2.4
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = -1

Query: 291 YTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMIS 184
Y E++ +K+ + I G+P+ D EK+IT+N +E ++
Sbjct: 298 YQERQLQKILVDIAGMPKDDFEKIITTNGSNSEWVA 333


>sp|Q2LCP5|NDUS1_DICCI NADH-ubiquinone oxidoreductase 75 kDa subunit
OS=Dictyostelium citrinum GN=nad11 PE=3 SV=2
Length = 688

Score = 30.8 bits (68), Expect = 4.0
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1

Query: 318 MYANEDDKEYTEQEKRKMNIVIRGIPESDNEKV-ITSNTDITEMISANFGMHDV 160
MY N+ + E+E++++ I RGI + + +V I N I +I N+ M D+
Sbjct: 604 MYLNKKEMNRKEKEQKEIKITYRGIKQKEKRQVKINKNLTINNIID-NYYMTDI 656


>sp|Q6XUX2|RIPK5_RAT Receptor-interacting serine/threonine-protein
kinase 5 OS=Rattus norvegicus GN=Ripk5 PE=2 SV=1
Length = 927

Score = 30.4 bits (67), Expect = 5.3
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Frame = -1

Query: 486 CRSSRVLLISTQLTMQDTLATHDEKIMQ---INVSENVGSWKDALTYTPMPQTFSMNRDM 316
CR+ +L+ ++ Q L+T +++Q ++ ++ + + + Q F M RD+
Sbjct: 325 CRAQSMLVEQSEKLRQ--LSTFSHQLLQTRLVDAAKALNAVHSHCLDIFINQAFDMQRDL 382

Query: 315 YANEDDKEYTEQEKRK-----MNIVIRGIPESDNEKVITSNTDITEMI--SANFGMHDVV 157
EYT +++ + MNI R E + V T NT E++ +AN DV+
Sbjct: 383 QITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLNTMKEELLDDAANMEFKDVI 442

Query: 156 V 154
V
Sbjct: 443 V 443


>sp|Q4TVR5|RIPK5_BOVIN Receptor-interacting serine/threonine-protein
kinase 5 OS=Bos taurus GN=RIPK5 PE=2 SV=1
Length = 928

Score = 30.4 bits (67), Expect = 5.3
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Frame = -1

Query: 342 QTFSMNRDMYANEDDKEYTEQEKRK-----MNIVIRGIPESDNEKVITSNTDITEMI--S 184
Q F M RD+ EYT +++ + MNI R E + V T NT E++ +
Sbjct: 375 QAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLNTMKEELLDDA 434

Query: 183 ANFGMHDVVVYGAH*VGKKKP*ANRAIVCTLLDVRKRAI 67
AN DV+V +P R I C + +++ I
Sbjct: 435 ANMEFKDVIV-----PENGEPVGTREIKCCIRQIQELII 468


>sp|P25618|CWH43_YEAST Protein CWH43 OS=Saccharomyces cerevisiae
GN=CWH43 PE=1 SV=2
Length = 953

Score = 30.4 bits (67), Expect = 5.3
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+A+ED ++ M + + G+ E+D +++ N D+T ++ + M+
Sbjct: 690 FGLDNDMWASEDRMINLIKD---MELDVVGLLETDTQRITMGNRDLTSKLAHDLNMY 743


>sp|O31948|YONJ_BACSU SPBc2 prophage-derived uncharacterized protein
yonJ OS=Bacillus subtilis GN=yonJ PE=4 SV=1
Length = 405

Score = 30.0 bits (66), Expect = 6.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3

Query: 289 HRTREKKNEHRDTGHPRIRQREGHYLEHRHHGNDL 185
H+ + KKN RD + + + Y+ H HHGN L
Sbjct: 315 HQIKNKKNAIRDISQMKRKFYDYMYISHFHHGNML 349


>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein
At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646

Score = 30.0 bits (66), Expect = 6.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1

Query: 327 NRDM-YANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANF 175
+RD+ YA++ + ++ N +IRG ESD +K + + T EM+S F
Sbjct: 72 HRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEF 123


tr_hit_id A7SIK6
Definition tr|A7SIK6|A7SIK6_NEMVE Predicted protein OS=Nematostella vectensis
Align length 101
Score (bit) 42.4
E-value 0.014
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP917819|Adiantum capillus-veneris mRNA, clone:
YMU001_000105_H02.
(519 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7SIK6|A7SIK6_NEMVE Predicted protein OS=Nematostella vectens... 42 0.014
tr|Q5B369|Q5B369_EMENI Putative uncharacterized protein OS=Emeri... 42 0.018
tr|Q0CP89|Q0CP89_ASPTN Calcofluor white hypersensitive protein O... 39 0.12
tr|A2R7F8|A2R7F8_ASPNC Localization: Cwh43 from S. cerevisiae is... 39 0.12
tr|Q2UQF1|Q2UQF1_ASPOR FGF receptor activating protein 1 OS=Aspe... 39 0.20
tr|B8MZL9|B8MZL9_ASPFL Integral plasma membrane protein, putativ... 39 0.20
tr|A1CK70|A1CK70_ASPCL Integral plasma membrane protein, putativ... 38 0.26
tr|B8F8F9|B8F8F9_HAEPR Malic enzyme OS=Haemophilus parasuis SH01... 36 1.00
tr|B0QRF5|B0QRF5_HAEPR Phosphate acetyltransferase OS=Haemophilu... 36 1.00
tr|B2AEL0|B2AEL0_PODAN Predicted CDS Pa_5_2230 OS=Podospora anse... 36 1.3
tr|A7TRI4|A7TRI4_VANPO Putative uncharacterized protein OS=Vande... 35 1.7
tr|Q6CX54|Q6CX54_KLULA KLLA0A11132p OS=Kluyveromyces lactis GN=K... 35 2.2
tr|A7F3M8|A7F3M8_SCLS1 Putative uncharacterized protein OS=Scler... 35 2.9
tr|Q7S513|Q7S513_NEUCR Putative uncharacterized protein OS=Neuro... 34 3.8
tr|Q4WXJ6|Q4WXJ6_ASPFU Integral plasma membrane protein, putativ... 34 3.8
tr|Q2HBQ7|Q2HBQ7_CHAGB Putative uncharacterized protein OS=Chaet... 34 3.8
tr|B2VXM1|B2VXM1_PYRTR Calcofluor white hypersensitive protein O... 34 3.8
tr|B0XY28|B0XY28_ASPFC Integral plasma membrane protein, putativ... 34 3.8
tr|A1D795|A1D795_NEOFI Integral plasma membrane protein, putativ... 34 3.8
tr|A6LT25|A6LT25_CLOB8 Putative uncharacterized protein OS=Clost... 34 5.0
tr|A0D080|A0D080_PARTE Chromosome undetermined scaffold_33, whol... 34 5.0
tr|B8M758|B8M758_9EURO Integral plasma membrane protein, putativ... 34 5.0
tr|B6QRB4|B6QRB4_PENMA Integral plasma membrane protein, putativ... 34 5.0
tr|Q248H1|Q248H1_TETTH Putative uncharacterized protein OS=Tetra... 33 8.5
tr|Q3JFS0|Q3JFS0_BURP1 200 kDa antigen p200, putative OS=Burkhol... 33 8.5
tr|Q4WQ75|Q4WQ75_ASPFU Cell cycle control protein (Cwf19), putat... 33 8.5
tr|B0Y711|B0Y711_ASPFC Cell cycle control protein (Cwf19), putat... 33 8.5

>tr|A7SIK6|A7SIK6_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g212821 PE=4 SV=1
Length = 368

Score = 42.4 bits (98), Expect = 0.014
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = -1

Query: 306 EDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH--DVVVYGAH*VG 133
ED +EQ R+ NI I GIPE D+E+ ++ + +I N G+ + +H G
Sbjct: 110 EDKFGKSEQYSRQKNIRIGGIPEDDSEEREQTDGKVINLIKENLGITILPTDICRSHRTG 169

Query: 132 KKKP*ANRAIVCTLLDVRKRAIILENARIYLKDSALYISEE 10
KKK R IV K ++ + + K S+++I+E+
Sbjct: 170 KKKDSKPRQIVKFTRHNTKLEVMRKRKELKQKKSSIFINED 210


>tr|Q5B369|Q5B369_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN5011.2 PE=4 SV=1
Length = 949

Score = 42.0 bits (97), Expect = 0.018
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+A+E QE + I + G+ ESDN+++I N DIT+ I+ + GM+
Sbjct: 694 FGLDNDMWASERRMRDVIQE---LEIDVLGLLESDNQRIIMGNRDITQFIAEDLGMY 747


>tr|Q0CP89|Q0CP89_ASPTN Calcofluor white hypersensitive protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_04495
PE=4 SV=1
Length = 949

Score = 39.3 bits (90), Expect = 0.12
Identities = 18/57 (31%), Positives = 36/57 (63%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+A+E + +E + + + G+ ESDN+++I N DIT+ ++ + GM+
Sbjct: 694 FGLDNDMWASERRMKNVIEE---LELDVIGLLESDNQRIIMGNRDITQSLAEDLGMY 747


>tr|A2R7F8|A2R7F8_ASPNC Localization: Cwh43 from S. cerevisiae is
localized at the plasma membrane OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=An16g03370 PE=4 SV=1
Length = 911

Score = 39.3 bits (90), Expect = 0.12
Identities = 18/57 (31%), Positives = 35/57 (61%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+A+E QE + + + G+ ESDN+++I N D+T+ ++ + GM+
Sbjct: 656 FGLDNDMWASERRMRDVIQE---LELDVIGLLESDNQRIIMGNRDVTQFLADDLGMY 709


>tr|Q2UQF1|Q2UQF1_ASPOR FGF receptor activating protein 1
OS=Aspergillus oryzae GN=AO090005001276 PE=4 SV=1
Length = 949

Score = 38.5 bits (88), Expect = 0.20
Identities = 17/57 (29%), Positives = 36/57 (63%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+++E QE + + + G+ ESDN+++I N D+T++++ + GM+
Sbjct: 694 FGLDNDMWSSERRMRNVIQE---LELDVIGLLESDNQRIIMGNRDMTQVLAEDLGMY 747


>tr|B8MZL9|B8MZL9_ASPFL Integral plasma membrane protein, putative
OS=Aspergillus flavus NRRL3357 GN=AFLA_085090 PE=4 SV=1
Length = 593

Score = 38.5 bits (88), Expect = 0.20
Identities = 17/57 (29%), Positives = 36/57 (63%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+++E QE + + + G+ ESDN+++I N D+T++++ + GM+
Sbjct: 338 FGLDNDMWSSERRMRNVIQE---LELDVIGLLESDNQRIIMGNRDMTQVLAEDLGMY 391


>tr|A1CK70|A1CK70_ASPCL Integral plasma membrane protein, putative
OS=Aspergillus clavatus GN=ACLA_037510 PE=4 SV=1
Length = 949

Score = 38.1 bits (87), Expect = 0.26
Identities = 18/57 (31%), Positives = 35/57 (61%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEKRKMNIVIRGIPESDNEKVITSNTDITEMISANFGMH 166
F ++ DM+++E +E + I + G+ ESDN+++I N DIT++++ GM+
Sbjct: 694 FGLDNDMWSSERRMRDVIKE---LEIDVIGLLESDNQRIIMGNRDITQVLAEELGMY 747


>tr|B8F8F9|B8F8F9_HAEPR Malic enzyme OS=Haemophilus parasuis SH0165
GN=sfcA PE=4 SV=1
Length = 755

Score = 36.2 bits (82), Expect = 1.00
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = -1

Query: 321 DMYANEDDKEYTEQEKRKMNIVIR-GIPESDNEKVITSNTDITEMISANFGMHDVVVYGA 145
D+ NE + ++ E KR +I+ R GI E+ ++V+TSNT + + G D +V G
Sbjct: 499 DVIDNEHNSQHDELWKRYYSIMKRKGITEAIAKRVVTSNTTVIASLLVEMGYADGLVCGL 558

Query: 144 H*VGKKKP*ANRAIVCTLLDVRKRA----IILENARIYLKDSALYISEEP 7
+ A R I+ V+ A ++L +++ D+ Y++ +P
Sbjct: 559 FGTYSRHLEAIRDIIGVKESVKVPAALNSLVLPTGNVFITDT--YVNADP 606


>tr|B0QRF5|B0QRF5_HAEPR Phosphate acetyltransferase OS=Haemophilus
parasuis 29755 GN=HPS_02179 PE=3 SV=1
Length = 755

Score = 36.2 bits (82), Expect = 1.00
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = -1

Query: 321 DMYANEDDKEYTEQEKRKMNIVIR-GIPESDNEKVITSNTDITEMISANFGMHDVVVYGA 145
D+ NE + ++ E KR +I+ R GI E+ ++V+TSNT + + G D +V G
Sbjct: 499 DVIDNEHNSQHDELWKRYYSIMKRKGITEAIAKRVVTSNTTVIASLLVEMGYADGLVCGL 558

Query: 144 H*VGKKKP*ANRAIVCTLLDVRKRA----IILENARIYLKDSALYISEEP 7
+ A R I+ V+ A ++L +++ D+ Y++ +P
Sbjct: 559 FGTYSRHLEAIRDIIGVKESVKVPAALNSLVLPTGNVFITDT--YVNADP 606


>tr|B2AEL0|B2AEL0_PODAN Predicted CDS Pa_5_2230 OS=Podospora
anserina PE=4 SV=1
Length = 664

Score = 35.8 bits (81), Expect = 1.3
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = -1

Query: 336 FSMNRDMYANEDDKEYTEQEK-RKMNIVIRGIPESDNEKVITSNTDITEMISANFGMHDV 160
FS++ DM+++E Y ++ ++M + + G+ ESD ++VI N D T+ ++ + GM+
Sbjct: 397 FSLDNDMWSSE----YRMRDLIKEMEVDVIGLLESDLQRVIMGNRDTTQFLAEDLGMY-- 450

Query: 159 VVYG 148
V YG
Sbjct: 451 VDYG 454